RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 DNERQ8NFT8 737 aa11.94□□□□□ -0.5
SPG11-217ENST00000559511 ZNF526Q8TF50 670 aaPredicted RBP11.94□□□□□ -0.5
SPG11-217ENST00000559511 ELMO3Q96BJ8 720 aa11.94□□□□□ -0.5
SPG11-217ENST00000559511 FBXL18Q96ME1 805 aa11.94□□□□□ -0.5
SPG11-217ENST00000559511 C17orf75Q9HAS0 396 aa11.94□□□□□ -0.5
SPG11-217ENST00000559511 CYP26B1Q9NR63 512 aa11.94□□□□□ -0.5
SPG11-217ENST00000559511 AMFRQ9UKV5 643 aa11.94□□□□□ -0.5
SPG11-217ENST00000559511 CXCL11O14625 94 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 DDX3YO15523 660 aaKnown RBP11.93□□□□□ -0.5
SPG11-217ENST00000559511 DGAT1O75907 488 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 SGPL1O95470 568 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 ITGA4P13612 1032 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 TTLL12Q14166 644 aaPredicted RBP11.93□□□□□ -0.5
SPG11-217ENST00000559511 GNPTABQ3T906 1256 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 KRT39Q6A163 491 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 NOP9Q86U38 636 aaKnown RBP11.93□□□□□ -0.5
SPG11-217ENST00000559511 FAM71AQ8IYT1 594 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 PPM1KQ8N3J5 372 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 EPS8L1Q8TE68 723 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 POMGNT1Q8WZA1 660 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 CDHR1Q96JP9 859 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 CALR3Q96L12 384 aaKnown RBP11.93□□□□□ -0.5
SPG11-217ENST00000559511 MFSD14AQ96MC6 490 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 PCDHB18PQ96TA0 734 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 SPATC1LQ9H0A9 340 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 ASCC2Q9H1I8 757 aaPredicted RBP11.93□□□□□ -0.5
SPG11-217ENST00000559511 ISCUQ9H1K1 167 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 NOCTQ9UK39 431 aaKnown RBP11.93□□□□□ -0.5
SPG11-217ENST00000559511 KCNH4Q9UQ05 1017 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 HNRNPDLO14979 420 aaKnown RBP11.93□□□□□ -0.5
SPG11-217ENST00000559511 CYP26A1O43174 497 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 FTLP02792 175 aaPredicted RBP11.93□□□□□ -0.5
SPG11-217ENST00000559511 ERVK-9P63128 1117 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 IRX3P78415 501 aaPredicted RBP11.93□□□□□ -0.5
SPG11-217ENST00000559511 CYP24A1Q07973 514 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 PAK2Q13177 524 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 NNTQ13423 1086 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 TAF3Q5VWG9 929 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 SLC47A2Q86VL8 602 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 MCPH1Q8NEM0 835 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 TAS1R2Q8TE23 839 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 VTI1AQ96AJ9 217 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 FAM84AQ96KN4 292 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 DDX47Q9H0S4 455 aaKnown RBP11.93□□□□□ -0.5
SPG11-217ENST00000559511 POLR3FQ9H1D9 316 aaPredicted RBP11.93□□□□□ -0.5
SPG11-217ENST00000559511 R3HDMLQ9H3Y0 253 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 ATP6V0A4Q9HBG4 840 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 TMEM8AQ9HCN3 771 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 FBXO40Q9UH90 709 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 COQ4Q9Y3A0 265 aa11.93□□□□□ -0.5
SPG11-217ENST00000559511 KRIT1O00522 736 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 DKC1O60832 514 aaKnown RBP eCLIP11.92□□□□□ -0.5
SPG11-217ENST00000559511 CNMDO75829 334 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 SUPT20HL2P0C7V6 817 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 ATP4AP20648 1035 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 ECHS1P30084 290 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 ALDH5A1P51649 535 aaPredicted RBP11.92□□□□□ -0.5
SPG11-217ENST00000559511 GPC3P51654 580 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 GUCY2FP51841 1108 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 RTP1P59025 263 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 PPIL2Q13356 520 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 MOGSQ13724 837 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 STXBP2Q15833 593 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 MTERF2Q49AM1 385 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 CYFIP1Q7L576 1253 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 NCAPG2Q86XI2 1143 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 HELQQ8TDG4 1101 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 SHC3Q92529 594 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 SH3GL2Q99962 352 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 PAGR1Q9BTK6 254 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 ARHGAP28Q9P2N2 729 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 PLXNA1Q9UIW2 1896 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 SOWAHBA6NEL2 793 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 GLTPD2A6NH11 291 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 SART1O43290 800 aaKnown RBP11.92□□□□□ -0.5
SPG11-217ENST00000559511 DLATP10515 647 aaKnown RBP11.92□□□□□ -0.5
SPG11-217ENST00000559511 ICAM3P32942 547 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 PRPF4BQ13523 1007 aaKnown RBP11.92□□□□□ -0.5
SPG11-217ENST00000559511 MIS18BP1Q6P0N0 1132 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 GPD1LQ8N335 351 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 TMC2Q8TDI7 906 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 AFAP1L1Q8TED9 768 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 OPTNQ96CV9 577 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 CHORDC1Q9UHD1 332 aaPredicted RBP11.92□□□□□ -0.5
SPG11-217ENST00000559511 AGTPBP1Q9UPW5 1226 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 NR2E1Q9Y466 385 aa11.92□□□□□ -0.5
SPG11-217ENST00000559511 SYNGAP1Q96PV0 1343 aa11.91□□□□□ -0.5
SPG11-217ENST00000559511 BHMG1C9JSJ3 638 aaPredicted RBP11.91□□□□□ -0.5
SPG11-217ENST00000559511 CCDC188H7C350 402 aa11.91□□□□□ -0.5
SPG11-217ENST00000559511 ATMINO43313 823 aaPredicted RBP11.91□□□□□ -0.5
SPG11-217ENST00000559511 FGGP02679 453 aa11.91□□□□□ -0.5
SPG11-217ENST00000559511 MMEP08473 750 aa11.91□□□□□ -0.5
SPG11-217ENST00000559511 CAPN2P17655 700 aa11.91□□□□□ -0.5
SPG11-217ENST00000559511 MFAP3P55082 362 aa11.91□□□□□ -0.5
SPG11-217ENST00000559511 HADHBP55084 474 aaKnown RBP11.91□□□□□ -0.5
SPG11-217ENST00000559511 FMO1Q01740 532 aa11.91□□□□□ -0.5
SPG11-217ENST00000559511 EMC2Q15006 297 aa11.91□□□□□ -0.5
SPG11-217ENST00000559511 EAPPQ56P03 285 aaPredicted RBP11.91□□□□□ -0.5
SPG11-217ENST00000559511 BRDTQ58F21 947 aaPredicted RBP11.91□□□□□ -0.5
SPG11-217ENST00000559511 SV2AQ7L0J3 742 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms