RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 ABI1Q8IZP0 508 aa22.25■■□□□ 1.15
TSPAN3-207ENST00000559494 CLP1Q92989 425 aaKnown RBP22.25■■□□□ 1.15
TSPAN3-207ENST00000559494 CDT1Q9H211 546 aa22.25■■□□□ 1.15
TSPAN3-207ENST00000559494 HCSTQ9UBK5 93 aa22.25■■□□□ 1.15
TSPAN3-207ENST00000559494 PRPF40AO75400 957 aaKnown RBP22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 NR1I2O75469 434 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 TOM1L1O75674 476 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 GCNT3O95395 438 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 ABCD1P33897 745 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 DCAF4L1Q3SXM0 396 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 GLB1LQ6UWU2 654 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 MPZL3Q6UWV2 235 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 MAP4K3Q8IVH8 894 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 GLIS3Q8NEA6 775 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 TCHPQ9BT92 498 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 HAPLN2Q9GZV7 340 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 IKZF4Q9H2S9 585 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 CWH43Q9H720 699 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 RSAD1Q9HA92 442 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 MTMR10Q9NXD2 777 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 SNTG2Q9NY99 539 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 MTUS1Q9ULD2 1270 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 PCDHB13Q9Y5F0 798 aa22.24■■□□□ 1.15
TSPAN3-207ENST00000559494 EPOPA6NHQ4 379 aa22.23■■□□□ 1.15
TSPAN3-207ENST00000559494 ANKRD63C9JTQ0 380 aa22.23■■□□□ 1.15
TSPAN3-207ENST00000559494 MYL1P05976 194 aa22.23■■□□□ 1.15
TSPAN3-207ENST00000559494 NOMO2Q5JPE7 1267 aa22.23■■□□□ 1.15
TSPAN3-207ENST00000559494 SLC39A4Q6P5W5 647 aa22.23■■□□□ 1.15
TSPAN3-207ENST00000559494 TMEM192Q8IY95 271 aa22.23■■□□□ 1.15
TSPAN3-207ENST00000559494 HACE1Q8IYU2 909 aa22.23■■□□□ 1.15
TSPAN3-207ENST00000559494 ARNTL2Q8WYA1 636 aa22.23■■□□□ 1.15
TSPAN3-207ENST00000559494 HVCN1Q96D96 273 aa22.23■■□□□ 1.15
TSPAN3-207ENST00000559494 BICD1Q96G01 975 aa22.23■■□□□ 1.15
TSPAN3-207ENST00000559494 GAD1Q99259 594 aa22.23■■□□□ 1.15
TSPAN3-207ENST00000559494 UBN1Q9NPG3 1134 aa22.23■■□□□ 1.15
TSPAN3-207ENST00000559494 MIOSQ9NXC5 875 aa22.23■■□□□ 1.15
TSPAN3-207ENST00000559494 PARP2Q9UGN5 583 aa22.23■■□□□ 1.15
TSPAN3-207ENST00000559494 INPP5FQ9Y2H2 1132 aa22.23■■□□□ 1.15
TSPAN3-207ENST00000559494 GIT1Q9Y2X7 761 aa22.23■■□□□ 1.15
TSPAN3-207ENST00000559494 RFXAPO00287 272 aa22.22■■□□□ 1.15
TSPAN3-207ENST00000559494 PRPF6O94906 941 aaKnown RBP22.22■■□□□ 1.15
TSPAN3-207ENST00000559494 MCF2P10911 925 aa22.22■■□□□ 1.15
TSPAN3-207ENST00000559494 BMPR1AP36894 532 aa22.22■■□□□ 1.15
TSPAN3-207ENST00000559494 LIG4P49917 911 aa22.22■■□□□ 1.15
TSPAN3-207ENST00000559494 DPYDQ12882 1025 aa22.22■■□□□ 1.15
TSPAN3-207ENST00000559494 ZNF568Q3ZCX4 644 aa22.22■■□□□ 1.15
TSPAN3-207ENST00000559494 EPC2Q52LR7 807 aa22.22■■□□□ 1.15
TSPAN3-207ENST00000559494 FAM26FQ5R3K3 315 aa22.22■■□□□ 1.15
TSPAN3-207ENST00000559494 L1TD1Q5T7N2 865 aaKnown RBP22.22■■□□□ 1.15
TSPAN3-207ENST00000559494 KANK3Q6NY19 840 aa22.22■■□□□ 1.15
TSPAN3-207ENST00000559494 CEP120Q8N960 986 aa22.22■■□□□ 1.15
TSPAN3-207ENST00000559494 PRDM12Q9H4Q4 367 aa22.22■■□□□ 1.15
TSPAN3-207ENST00000559494 KLK14Q9P0G3 267 aa22.22■■□□□ 1.15
TSPAN3-207ENST00000559494 CDH23Q9H251 3354 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 ARL5CA6NH57 179 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 INPPL1O15357 1258 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 CLDN3O15551 220 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 UBE2HP62256 183 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 MCL1Q07820 350 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 ALCAMQ13740 583 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 KMT5BQ4FZB7 885 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 EPM2AIP1Q7L775 607 aaPredicted RBP22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 APBB1IPQ7Z5R6 666 aaPredicted RBP22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 GSTCDQ8NEC7 633 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 ZFP42Q96MM3 310 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 TIGD1Q96MW7 591 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 GUCD1Q96NT3 240 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 SAMD11Q96NU1 681 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 ACCSQ96QU6 501 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 CXCL16Q9H2A7 254 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 TBC1D13Q9NVG8 400 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 ANKFY1Q9P2R3 1169 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 GDAQ9Y2T3 454 aa22.21■■□□□ 1.15
TSPAN3-207ENST00000559494 TRIP11Q15643 1979 aa22.2■■□□□ 1.14
TSPAN3-207ENST00000559494 NLRC5Q86WI3 1866 aa22.2■■□□□ 1.14
TSPAN3-207ENST00000559494 TISP43B9A030 160 aa22.2■■□□□ 1.14
TSPAN3-207ENST00000559494 HNRNPDLO14979 420 aaKnown RBP22.2■■□□□ 1.14
TSPAN3-207ENST00000559494 RPN1P04843 607 aaKnown RBP22.2■■□□□ 1.14
TSPAN3-207ENST00000559494 HARSP12081 509 aaKnown RBP22.2■■□□□ 1.14
TSPAN3-207ENST00000559494 HOXD13P35453 343 aa22.2■■□□□ 1.14
TSPAN3-207ENST00000559494 GRM5P41594 1212 aa22.2■■□□□ 1.14
TSPAN3-207ENST00000559494 THNSL1Q8IYQ7 743 aa22.2■■□□□ 1.14
TSPAN3-207ENST00000559494 LRRC43Q8N309 656 aa22.2■■□□□ 1.14
TSPAN3-207ENST00000559494 ZNF507Q8TCN5 953 aa22.2■■□□□ 1.14
TSPAN3-207ENST00000559494 RSPH1Q8WYR4 309 aa22.2■■□□□ 1.14
TSPAN3-207ENST00000559494 CDX2Q99626 313 aaPredicted RBP22.2■■□□□ 1.14
TSPAN3-207ENST00000559494 SLC39A2Q9NP94 309 aa22.2■■□□□ 1.14
TSPAN3-207ENST00000559494 MYO7AQ13402 2215 aa22.19■■□□□ 1.14
TSPAN3-207ENST00000559494 TRANK1O15050 2925 aa22.19■■□□□ 1.14
TSPAN3-207ENST00000559494 RECQL4O94761 1208 aa22.19■■□□□ 1.14
TSPAN3-207ENST00000559494 POMCP01189 267 aa22.19■■□□□ 1.14
TSPAN3-207ENST00000559494 CTNNB1P35222 781 aa22.19■■□□□ 1.14
TSPAN3-207ENST00000559494 MLH1P40692 756 aa22.19■■□□□ 1.14
TSPAN3-207ENST00000559494 OSTNP61366 133 aa22.19■■□□□ 1.14
TSPAN3-207ENST00000559494 NOLC1Q14978 699 aaKnown RBP eCLIP22.19■■□□□ 1.144e-6■□□□□ 8.2
TSPAN3-207ENST00000559494 POSTNQ15063 836 aa22.19■■□□□ 1.14
TSPAN3-207ENST00000559494 SEZ6Q53EL9 994 aa22.19■■□□□ 1.14
TSPAN3-207ENST00000559494 SPOUT1Q5T280 376 aaKnown RBP22.19■■□□□ 1.14
TSPAN3-207ENST00000559494 ZNF280BQ86YH2 543 aa22.19■■□□□ 1.14
TSPAN3-207ENST00000559494 FBXO22Q8NEZ5 403 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms