RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 BARX2Q9UMQ3 279 aaPredicted RBP9.02□□□□□ -0.97
SNX1-207ENST00000559401 GDAQ9Y2T3 454 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 GIT1Q9Y2X7 761 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 EYSQ5T1H1 3165 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 NPHP3-ACAD11A0A0J9YXS1 232 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 GRXCR2A6NFK2 248 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 SPDYE4A6NLX3 237 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 NRP1O14786 923 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 FSCN2O14926 492 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 SLC26A4O43511 780 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 RECQL4O94761 1208 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 FAM13AO94988 1023 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 CXCL14O95715 111 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 ALDH2P05091 517 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 EDN1P05305 212 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 GUCY2CP25092 1073 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 LTBRP36941 435 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 MATR3P43243 847 aaKnown RBP eCLIP9.01□□□□□ -0.97
SNX1-207ENST00000559401 SMTNP53814 917 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 RBM10P98175 930 aaKnown RBP9.01□□□□□ -0.97
SNX1-207ENST00000559401 GRIK3Q13003 919 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 STRN3Q13033 797 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 MAPK7Q13164 816 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 MCM6Q14566 821 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 COL19A1Q14993 1142 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 DUSP6Q16828 381 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 CTC1Q2NKJ3 1217 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 DCAF4L1Q3SXM0 396 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 ZNF568Q3ZCX4 644 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 SPECC1Q5M775 1068 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 DDX53Q86TM3 631 aaKnown RBP9.01□□□□□ -0.97
SNX1-207ENST00000559401 DAW1Q8N136 415 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 KCTD17Q8N5Z5 321 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 BCL7CQ8WUZ0 217 aaPredicted RBP9.01□□□□□ -0.97
SNX1-207ENST00000559401 TMEM175Q9BSA9 504 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 TCHPQ9BT92 498 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 MRPL4Q9BYD3 311 aaKnown RBP9.01□□□□□ -0.97
SNX1-207ENST00000559401 ZBP1Q9H171 429 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 C17orf75Q9HAS0 396 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 SNTG2Q9NY99 539 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 KCND2Q9NZV8 630 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 CCDC39Q9UFE4 941 aa9.01□□□□□ -0.97
SNX1-207ENST00000559401 RBM19Q9Y4C8 960 aaKnown RBP9.01□□□□□ -0.97
SNX1-207ENST00000559401 UNC80Q8N2C7 3258 aa9□□□□□ -0.97
SNX1-207ENST00000559401 C2orf71A6NGG8 1288 aa9□□□□□ -0.97
SNX1-207ENST00000559401 C2CD2LO14523 706 aa9□□□□□ -0.97
SNX1-207ENST00000559401 MBTPS2O43462 519 aa9□□□□□ -0.97
SNX1-207ENST00000559401 TBCAO75347 108 aaKnown RBP9□□□□□ -0.97
SNX1-207ENST00000559401 GLP2RO95838 553 aa9□□□□□ -0.97
SNX1-207ENST00000559401 URODP06132 367 aa9□□□□□ -0.97
SNX1-207ENST00000559401 PLS3P13797 630 aa9□□□□□ -0.97
SNX1-207ENST00000559401 SLC12A3P55017 1021 aa9□□□□□ -0.97
SNX1-207ENST00000559401 OSTNP61366 133 aa9□□□□□ -0.97
SNX1-207ENST00000559401 SMAD4Q13485 552 aaKnown RBP9□□□□□ -0.97
SNX1-207ENST00000559401 PTPAQ15257 358 aa9□□□□□ -0.97
SNX1-207ENST00000559401 FOXD4L6Q3SYB3 417 aaPredicted RBP9□□□□□ -0.97
SNX1-207ENST00000559401 NT5DC1Q5TFE4 455 aa9□□□□□ -0.97
SNX1-207ENST00000559401 FOXD4L3Q6VB84 417 aaPredicted RBP9□□□□□ -0.97
SNX1-207ENST00000559401 ZBTB33Q86T24 672 aa9□□□□□ -0.97
SNX1-207ENST00000559401 COLGALT2Q8IYK4 626 aa9□□□□□ -0.97
SNX1-207ENST00000559401 LARP4BQ92615 738 aaKnown RBP9□□□□□ -0.97
SNX1-207ENST00000559401 RABGGTAQ92696 567 aa9□□□□□ -0.97
SNX1-207ENST00000559401 RAD54LQ92698 747 aa9□□□□□ -0.97
SNX1-207ENST00000559401 BICD1Q96G01 975 aa9□□□□□ -0.97
SNX1-207ENST00000559401 EPSTI1Q96J88 318 aa9□□□□□ -0.97
SNX1-207ENST00000559401 ZNF396Q96N95 335 aaPredicted RBP9□□□□□ -0.97
SNX1-207ENST00000559401 CLIC6Q96NY7 704 aa9□□□□□ -0.97
SNX1-207ENST00000559401 USP28Q96RU2 1077 aa9□□□□□ -0.97
SNX1-207ENST00000559401 REEP2Q9BRK0 252 aa9□□□□□ -0.97
SNX1-207ENST00000559401 CCDC94Q9BW85 323 aaPredicted RBP9□□□□□ -0.97
SNX1-207ENST00000559401 TARS2Q9BW92 718 aaKnown RBP9□□□□□ -0.97
SNX1-207ENST00000559401 COLEC11Q9BWP8 271 aa9□□□□□ -0.97
SNX1-207ENST00000559401 APOL5Q9BWW9 433 aa9□□□□□ -0.97
SNX1-207ENST00000559401 TMEM134Q9H6X4 195 aa9□□□□□ -0.97
SNX1-207ENST00000559401 MIOSQ9NXC5 875 aa9□□□□□ -0.97
SNX1-207ENST00000559401 LARSQ9P2J5 1176 aaKnown RBP9□□□□□ -0.97
SNX1-207ENST00000559401 ANKFY1Q9P2R3 1169 aa9□□□□□ -0.97
SNX1-207ENST00000559401 KCNG1Q9UIX4 513 aa9□□□□□ -0.97
SNX1-207ENST00000559401 FBXO2Q9UK22 296 aaPredicted RBP9□□□□□ -0.97
SNX1-207ENST00000559401 REV3LO60673 3130 aa9□□□□□ -0.97
SNX1-207ENST00000559401 ZMYM2Q9UBW7 1377 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 PRUNE2Q8WUY3 3088 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 TRIP11Q15643 1979 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 CITO14578 2027 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 CASTOR2A6NHX0 329 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 H0YCG3 227 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 K7ENM7 598 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 INPPL1O15357 1258 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 THP07101 528 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 CTSAP10619 480 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 YARSP54577 528 aaKnown RBP8.99□□□□□ -0.97
SNX1-207ENST00000559401 DSC1Q08554 894 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 GIT2Q14161 759 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 ARSHQ5FYA8 562 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 GLRA4Q5JXX5 417 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 RRAGBQ5VZM2 374 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 KIAA1841Q6NSI8 718 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 USP49Q70CQ1 688 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 FAM178BQ8IXR5 827 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 MYCT1Q8N699 235 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms