RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 RHPN2Q8IUC4 686 aa6.5□□□□□ -1.37
USP3-212ENST00000559276 ABI1Q8IZP0 508 aa6.5□□□□□ -1.37
USP3-212ENST00000559276 BLIDQ8IZY5 108 aa6.5□□□□□ -1.37
USP3-212ENST00000559276 VPS52Q8N1B4 723 aa6.5□□□□□ -1.37
USP3-212ENST00000559276 C17orf53Q8N3J3 647 aaPredicted RBP6.5□□□□□ -1.37
USP3-212ENST00000559276 TMEM105Q8N8V8 129 aa6.5□□□□□ -1.37
USP3-212ENST00000559276 SPC24Q8NBT2 197 aa6.5□□□□□ -1.37
USP3-212ENST00000559276 KREMEN2Q8NCW0 462 aa6.5□□□□□ -1.37
USP3-212ENST00000559276 OXER1Q8TDS5 423 aa6.5□□□□□ -1.37
USP3-212ENST00000559276 CASP10Q92851 521 aa6.5□□□□□ -1.37
USP3-212ENST00000559276 ZNF274Q96GC6 653 aaPredicted RBP6.5□□□□□ -1.37
USP3-212ENST00000559276 C16orf45Q96MC5 204 aaPredicted RBP6.5□□□□□ -1.37
USP3-212ENST00000559276 RIPOR3Q96MK2 946 aa6.5□□□□□ -1.37
USP3-212ENST00000559276 PHF20Q9BVI0 1012 aa6.5□□□□□ -1.37
USP3-212ENST00000559276 GCOM2Q9BZD3 368 aaPredicted RBP6.5□□□□□ -1.37
USP3-212ENST00000559276 DHX33Q9H6R0 707 aaKnown RBP6.5□□□□□ -1.37
USP3-212ENST00000559276 L2HGDHQ9H9P8 463 aa6.5□□□□□ -1.37
USP3-212ENST00000559276 SUCLA2Q9P2R7 463 aaPredicted RBP6.5□□□□□ -1.37
USP3-212ENST00000559276 RCOR1Q9UKL0 485 aa6.5□□□□□ -1.37
USP3-212ENST00000559276 KCNJ14Q9UNX9 436 aa6.5□□□□□ -1.37
USP3-212ENST00000559276 ZDBF2Q9HCK1 2354 aa6.5□□□□□ -1.37
USP3-212ENST00000559276 DCHS1Q96JQ0 3298 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 FAM205CA6NFA0 338 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 BECN2A8MW95 431 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 F8W810 466 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 H3BQV1 296 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 WNT7AO00755 349 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 KINO60870 393 aaKnown RBP6.49□□□□□ -1.37
USP3-212ENST00000559276 N4BP1O75113 896 aaKnown RBP6.49□□□□□ -1.37
USP3-212ENST00000559276 ZC3H11AO75152 810 aaKnown RBP eCLIP6.49□□□□□ -1.37
USP3-212ENST00000559276 SLU7O95391 586 aaKnown RBP6.49□□□□□ -1.37
USP3-212ENST00000559276 DEXIO95424 95 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 CTDNEP1O95476 244 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 ASGR2P07307 311 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 U2AF2P26368 475 aaKnown RBP eCLIP6.49□□□□□ -1.37
USP3-212ENST00000559276 ALDH7A1P49419 539 aaKnown RBP6.49□□□□□ -1.37
USP3-212ENST00000559276 POLGP54098 1239 aaPredicted RBP6.49□□□□□ -1.37
USP3-212ENST00000559276 PTPN5P54829 565 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 PSMC5P62195 406 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 AKAP17AQ02040 695 aaKnown RBP6.49□□□□□ -1.37
USP3-212ENST00000559276 FAM160A1Q05DH4 1040 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 ITIH3Q06033 890 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 SSRP1Q08945 709 aaKnown RBP6.49□□□□□ -1.37
USP3-212ENST00000559276 SCRN1Q12765 414 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 NOMO2Q5JPE7 1267 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 RARS2Q5T160 578 aaKnown RBP6.49□□□□□ -1.37
USP3-212ENST00000559276 TWF2Q6IBS0 349 aaKnown RBP6.49□□□□□ -1.37
USP3-212ENST00000559276 KIAA1841Q6NSI8 718 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 POTEGQ6S5H5 508 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 TAS1R1Q7RTX1 841 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 SUGP1Q8IWZ8 645 aaKnown RBP6.49□□□□□ -1.37
USP3-212ENST00000559276 RNF168Q8IYW5 571 aaPredicted RBP6.49□□□□□ -1.37
USP3-212ENST00000559276 SMG8Q8ND04 991 aaKnown RBP6.49□□□□□ -1.37
USP3-212ENST00000559276 PRPF31Q8WWY3 499 aaKnown RBP6.49□□□□□ -1.37
USP3-212ENST00000559276 TNFRSF25Q93038 417 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 TMEM143Q96AN5 459 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 TMEM169Q96HH4 297 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 NLRP4Q96MN2 994 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 MRPL9Q9BYD2 267 aaKnown RBP6.49□□□□□ -1.37
USP3-212ENST00000559276 RNF39Q9H2S5 420 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 XPNPEP1Q9NQW7 623 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 CYP26B1Q9NR63 512 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 AGPAT5Q9NUQ2 364 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 ARGLU1Q9NWB6 273 aaPredicted RBP6.49□□□□□ -1.37
USP3-212ENST00000559276 MARCH5Q9NX47 278 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 CALCOCO1Q9P1Z2 691 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 DDX25Q9UHL0 483 aaKnown RBP6.49□□□□□ -1.37
USP3-212ENST00000559276 TCEAL9Q9UHQ7 104 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 PIN4Q9Y237 131 aaKnown RBP6.49□□□□□ -1.37
USP3-212ENST00000559276 PCDHB2Q9Y5E7 798 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 PHLPP2Q6ZVD8 1323 aa6.49□□□□□ -1.37
USP3-212ENST00000559276 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.48□□□□□ -1.37
USP3-212ENST00000559276 GOLGA6L9A6NEM1 432 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 H0Y858 1186 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 INPPL1O15357 1258 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 PFKFB2O60825 505 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 NR1I2O75469 434 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 PAPLNO95428 1278 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 CNPP09543 421 aaKnown RBP6.48□□□□□ -1.37
USP3-212ENST00000559276 SRGAP2BP0DMP2 458 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 SKILP12757 684 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 FDPSP14324 419 aaKnown RBP6.48□□□□□ -1.37
USP3-212ENST00000559276 NPR3P17342 541 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 SFPQP23246 707 aaKnown RBP eCLIP6.48□□□□□ -1.37
USP3-212ENST00000559276 MTHFRP42898 656 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 QARSP47897 775 aaKnown RBP6.48□□□□□ -1.37
USP3-212ENST00000559276 CLCN4P51793 760 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 TUBB4BP68371 445 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 CDC42EP1Q00587 391 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 LAMTOR4Q0VGL1 99 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 STK3Q13188 491 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 BMS1Q14692 1282 aaKnown RBP6.48□□□□□ -1.37
USP3-212ENST00000559276 NONOQ15233 471 aaKnown RBP eCLIP6.48□□□□□ -1.37
USP3-212ENST00000559276 TERF2Q15554 542 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 LETM2Q2VYF4 491 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 CWF19L1Q69YN2 538 aaKnown RBP6.48□□□□□ -1.37
USP3-212ENST00000559276 PPP4R3AQ6IN85 833 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 GALNT17Q6IS24 598 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 GLB1LQ6UWU2 654 aa6.48□□□□□ -1.37
USP3-212ENST00000559276 TMC5Q6UXY8 1006 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms