RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 BRDTQ58F21 947 aaPredicted RBP8.5□□□□□ -1.05
SPG11-213ENST00000558988 TMEM240Q5SV17 173 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 ARHGEF16Q5VV41 709 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 DEFB128Q7Z7B8 93 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 RNF214Q8ND24 703 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 MAFAQ8NHW3 353 aaPredicted RBP8.5□□□□□ -1.05
SPG11-213ENST00000558988 MORC4Q8TE76 937 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 SCFD2Q8WU76 684 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 PPM1EQ8WY54 764 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 NOC4LQ9BVI4 516 aaKnown RBP8.5□□□□□ -1.05
SPG11-213ENST00000558988 JMJD4Q9H9V9 463 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 KRT82Q9NSB4 513 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 COL20A1Q9P218 1284 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 TAF6LQ9Y6J9 622 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.49□□□□□ -1.05
SPG11-213ENST00000558988 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.49□□□□□ -1.05
SPG11-213ENST00000558988 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.49□□□□□ -1.05
SPG11-213ENST00000558988 H3BS24 57 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 RBAK-RBAKDNI3L0D1 243 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 AKAP8O43823 692 aaKnown RBP8.49□□□□□ -1.05
SPG11-213ENST00000558988 ARIH2O95376 493 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 CYP21A2P08686 494 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 MPSTP25325 297 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 PURAQ00577 322 aaKnown RBP8.49□□□□□ -1.05
SPG11-213ENST00000558988 EHHADHQ08426 723 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 WTAPQ15007 396 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 PSRC1Q6PGN9 363 aaPredicted RBP8.49□□□□□ -1.05
SPG11-213ENST00000558988 C16orf59Q7L2K0 433 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 SKAP1Q86WV1 359 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 MCF2L2Q86YR7 1114 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 GALNT12Q8IXK2 581 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 DNERQ8NFT8 737 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 FEZF2Q8TBJ5 459 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 SYTL5Q8TDW5 730 aaPredicted RBP8.49□□□□□ -1.05
SPG11-213ENST00000558988 NSUN6Q8TEA1 469 aaKnown RBP8.49□□□□□ -1.05
SPG11-213ENST00000558988 AFG1LQ8WV93 481 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 TIFAQ96CG3 184 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 CCDC97Q96F63 343 aaPredicted RBP8.49□□□□□ -1.05
SPG11-213ENST00000558988 CRELD1Q96HD1 420 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 RMDN3Q96TC7 470 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 MTG1Q9BT17 334 aaPredicted RBP8.49□□□□□ -1.05
SPG11-213ENST00000558988 MYL10Q9BUA6 226 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 AMNQ9BXJ7 453 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 ALDH8A1Q9H2A2 487 aaPredicted RBP8.49□□□□□ -1.05
SPG11-213ENST00000558988 IL23AQ9NPF7 189 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 MRPL11Q9Y3B7 192 aaKnown RBP8.49□□□□□ -1.05
SPG11-213ENST00000558988 Q9Y3F1 56 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 PCDHA1Q9Y5I3 950 aa8.49□□□□□ -1.05
SPG11-213ENST00000558988 E7EWF7 191 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 PPP1R11O60927 126 aaPredicted RBP8.48□□□□□ -1.05
SPG11-213ENST00000558988 FGBP02675 491 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 GSTP1P09211 210 aaKnown RBP8.48□□□□□ -1.05
SPG11-213ENST00000558988 RABGGTBP53611 331 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 NKX3-2P78367 333 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 EFEMP1Q12805 493 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 SART3Q15020 963 aaKnown RBP8.48□□□□□ -1.05
SPG11-213ENST00000558988 SEC23AQ15436 765 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 STXBP2Q15833 593 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 STOX1Q6ZVD7 989 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 RAB11FIP4Q86YS3 637 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 TMEM151BQ8IW70 566 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 SLC43A3Q8NBI5 491 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 NCOA7Q8NI08 942 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 ANKS1AQ92625 1134 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 PIGSQ96S52 555 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 ALG1Q9BT22 464 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 RNF32Q9H0A6 362 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 WNT8AQ9H1J5 351 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 DNAJC25Q9H1X3 360 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 MTIF3Q9H2K0 278 aaKnown RBP8.48□□□□□ -1.05
SPG11-213ENST00000558988 NKX2-4Q9H2Z4 354 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 MSRAQ9UJ68 235 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 MRVI1Q9Y6F6 885 aa8.48□□□□□ -1.05
SPG11-213ENST00000558988 BAZ2BQ9UIF8 2168 aaKnown RBP8.48□□□□□ -1.05
SPG11-213ENST00000558988 RANBP2P49792 3224 aaKnown RBP8.48□□□□□ -1.05
SPG11-213ENST00000558988 LOC102724159A0A0B4J2E5 919 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 RBM47A0AV96 593 aaKnown RBP8.47□□□□□ -1.05
SPG11-213ENST00000558988 PRR33A8MZF0 331 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 NKRFO15226 690 aaKnown RBP eCLIP8.47□□□□□ -1.05
SPG11-213ENST00000558988 SGSM2O43147 1006 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 SEMA7AO75326 666 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 GH1P01241 217 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 SUPT20HL2P0C7V6 817 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 ZNF286BP0CG31 522 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 EDNRBP24530 442 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 GRM4Q14833 912 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 PWP2Q15269 919 aaKnown RBP8.47□□□□□ -1.05
SPG11-213ENST00000558988 SPATS1Q496A3 300 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 RALGPS1Q5JS13 557 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 CATIPQ7Z7H3 387 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 RETREG2Q8NC44 543 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 IL31RAQ8NI17 732 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 FTOQ9C0B1 505 aaKnown RBP eCLIP8.47□□□□□ -1.05
SPG11-213ENST00000558988 PRDM12Q9H4Q4 367 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 PXMP2Q9NR77 195 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 MAD2L2Q9UI95 211 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 RBM8AQ9Y5S9 174 aaKnown RBP8.47□□□□□ -1.05
SPG11-213ENST00000558988 SLC4A7Q9Y6M7 1214 aa8.47□□□□□ -1.05
SPG11-213ENST00000558988 SCN5AQ14524 2016 aa8.46□□□□□ -1.05
SPG11-213ENST00000558988 ZBTB5O15062 677 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms