RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 SCARA3Q6AZY7 606 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 ALKAL1Q6UXT8 129 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 RNF168Q8IYW5 571 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 LRRC43Q8N309 656 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 PDILTQ8N807 584 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 ZSWIM2Q8NEG5 633 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 DEPTORQ8TB45 409 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 HPS3Q969F9 1004 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 ZMAT2Q96NC0 199 aaKnown RBP13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 C11orf84Q9BUA3 381 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 APOL6Q9BWW8 343 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 KMT5AQ9NQR1 393 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 HOXD13P35453 343 aa13.92□□□□□ -0.18
RABGGTA-207ENST00000558936 KCNQ1P51787 676 aa13.92□□□□□ -0.18
RABGGTA-207ENST00000558936 SOX4Q06945 474 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-207ENST00000558936 MAPK6Q16659 721 aa13.92□□□□□ -0.18
RABGGTA-207ENST00000558936 ATF7IP2Q5U623 682 aa13.92□□□□□ -0.18
RABGGTA-207ENST00000558936 RESP18Q5W5W9 173 aa13.92□□□□□ -0.18
RABGGTA-207ENST00000558936 DYMQ7RTS9 669 aa13.92□□□□□ -0.18
RABGGTA-207ENST00000558936 LEO1Q8WVC0 666 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-207ENST00000558936 DDX12PQ92771 950 aa13.92□□□□□ -0.18
RABGGTA-207ENST00000558936 CCDC51Q96ER9 411 aa13.92□□□□□ -0.18
RABGGTA-207ENST00000558936 CALML4Q96GE6 196 aa13.92□□□□□ -0.18
RABGGTA-207ENST00000558936 C2orf40Q9H1Z8 148 aa13.92□□□□□ -0.18
RABGGTA-207ENST00000558936 KBTBD4Q9NVX7 518 aa13.92□□□□□ -0.18
RABGGTA-207ENST00000558936 TNFSF13BQ9Y275 285 aa13.92□□□□□ -0.18
RABGGTA-207ENST00000558936 PLXNA3P51805 1871 aa13.92□□□□□ -0.18
RABGGTA-207ENST00000558936 PHLPP2Q6ZVD8 1323 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 ANKRD63C9JTQ0 380 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 K7ERI5 159 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 NRP1O14786 923 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 HOXA2O43364 376 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 CUTAO60888 179 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 LILRB3O75022 631 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 TBX10O75333 385 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 RECQL4O94761 1208 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 BMP1P13497 986 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 ITGA4P13612 1032 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 PTPROQ16827 1216 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 XKR4Q5GH76 650 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 HAUS6Q7Z4H7 955 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 ZBTB8OSQ8IWT0 167 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 AUTS2Q8WXX7 1259 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 MRPS27Q92552 414 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 IGSF21Q96ID5 467 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 DRC1Q96MC2 740 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 ZNF396Q96N95 335 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 LMAN2LQ9H0V9 348 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 C17orf75Q9HAS0 396 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 GDPD2Q9HCC8 539 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 KCND2Q9NZV8 630 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 CLEC1BQ9P126 229 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 ODF2LQ9ULJ1 636 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 HPSEQ9Y251 543 aa13.91□□□□□ -0.18
RABGGTA-207ENST00000558936 PER2O15055 1255 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 ZC3H11AO75152 810 aaKnown RBP eCLIP13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 HSP90AA1P07900 732 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 LAG3P18627 525 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 TNFSF9P41273 254 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 EFNA5P52803 228 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 WNT7BP56706 349 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 GTF2BQ00403 316 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 EHHADHQ08426 723 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 DMP1Q13316 513 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 PPP2R5AQ15172 486 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 RRAGBQ5VZM2 374 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 GLB1LQ6UWU2 654 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 SFR1Q86XK3 245 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 GRAMD1CQ8IYS0 662 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 ATXN2LQ8WWM7 1075 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 CDK5RAP3Q96JB5 506 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 IFT74Q96LB3 600 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 NECAB3Q96P71 396 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 TIPINQ9BVW5 301 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 COL25A1Q9BXS0 654 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 GBP3Q9H0R5 595 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 GOLPH3LQ9H4A5 285 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 NSUN3Q9H649 340 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 THEGQ9P2T0 379 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 STK17AQ9UEE5 414 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 GIT1Q9Y2X7 761 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 DOCK6Q96HP0 2047 aa13.9□□□□□ -0.18
RABGGTA-207ENST00000558936 FAM237AA0A1B0GTK4 181 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 N4BP3O15049 544 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 ACTN4O43707 911 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 TRAK2O60296 914 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 PIGRP01833 764 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 SKIP12755 728 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 ADSSP30520 456 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 ADAM15Q13444 863 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 SKIV2LQ15477 1246 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 SLC10A6Q3KNW5 377 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 GLRA4Q5JXX5 417 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 ZNF720Q7Z2F6 126 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 ZBTB33Q86T24 672 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 MYCT1Q8N699 235 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 C3orf58Q8NDZ4 430 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 PGBD4Q96DM1 585 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 B3GALT6Q96L58 329 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms