RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 AGXTP21549 392 aa5.03□□□□□ -1.6
VPS13C-207ENST00000558919 CDKN1CP49918 316 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-207ENST00000558919 SYDE2Q5VT97 1194 aa5.03□□□□□ -1.6
VPS13C-207ENST00000558919 GPRIN1Q7Z2K8 1008 aa5.03□□□□□ -1.6
VPS13C-207ENST00000558919 CBARPQ8N350 705 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-207ENST00000558919 PRPF38AQ8NAV1 312 aaKnown RBP5.03□□□□□ -1.6
VPS13C-207ENST00000558919 OR7D4Q8NG98 312 aa5.03□□□□□ -1.6
VPS13C-207ENST00000558919 OR52N2Q8NGI0 321 aa5.03□□□□□ -1.6
VPS13C-207ENST00000558919 CACTINQ8WUQ7 758 aaKnown RBP5.03□□□□□ -1.6
VPS13C-207ENST00000558919 LSM14BQ9BX40 385 aaKnown RBP5.03□□□□□ -1.6
VPS13C-207ENST00000558919 BRINP2Q9C0B6 783 aa5.03□□□□□ -1.6
VPS13C-207ENST00000558919 PCDH12Q9NPG4 1184 aa5.03□□□□□ -1.6
VPS13C-207ENST00000558919 COL4A3BPQ9Y5P4 624 aa5.03□□□□□ -1.6
VPS13C-207ENST00000558919 ZMYM3Q14202 1370 aa5.03□□□□□ -1.6
VPS13C-207ENST00000558919 B5MCH6 92 aa5.02□□□□□ -1.61
VPS13C-207ENST00000558919 FZD7O75084 574 aa5.02□□□□□ -1.61
VPS13C-207ENST00000558919 OSMP13725 252 aa5.02□□□□□ -1.61
VPS13C-207ENST00000558919 HK1P19367 917 aa5.02□□□□□ -1.61
VPS13C-207ENST00000558919 ECHS1P30084 290 aa5.02□□□□□ -1.61
VPS13C-207ENST00000558919 ADSLP30566 484 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-207ENST00000558919 MCAMP43121 646 aa5.02□□□□□ -1.61
VPS13C-207ENST00000558919 PPP3CAQ08209 521 aa5.02□□□□□ -1.61
VPS13C-207ENST00000558919 VPS72Q15906 364 aa5.02□□□□□ -1.61
VPS13C-207ENST00000558919 LSM12Q3MHD2 195 aaKnown RBP5.02□□□□□ -1.61
VPS13C-207ENST00000558919 Q8N1X5 172 aa5.02□□□□□ -1.61
VPS13C-207ENST00000558919 C1orf162Q8NEQ5 155 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-207ENST00000558919 MDM1Q8TC05 714 aa5.02□□□□□ -1.61
VPS13C-207ENST00000558919 ADI1Q9BV57 179 aa5.02□□□□□ -1.61
VPS13C-207ENST00000558919 ZNF341Q9BYN7 854 aa5.02□□□□□ -1.61
VPS13C-207ENST00000558919 CSRNP2Q9H175 543 aa5.02□□□□□ -1.61
VPS13C-207ENST00000558919 PRR5-ARHGAP8B1AHC4 643 aa5.01□□□□□ -1.61
VPS13C-207ENST00000558919 ENDOD1O94919 500 aa5.01□□□□□ -1.61
VPS13C-207ENST00000558919 FLT3LGP49771 235 aa5.01□□□□□ -1.61
VPS13C-207ENST00000558919 KRT85P78386 507 aa5.01□□□□□ -1.61
VPS13C-207ENST00000558919 DGCR2P98153 550 aa5.01□□□□□ -1.61
VPS13C-207ENST00000558919 ITKQ08881 620 aa5.01□□□□□ -1.61
VPS13C-207ENST00000558919 MGAT2Q10469 447 aa5.01□□□□□ -1.61
VPS13C-207ENST00000558919 MTMR1Q13613 665 aa5.01□□□□□ -1.61
VPS13C-207ENST00000558919 TUBA3CQ13748 450 aa5.01□□□□□ -1.61
VPS13C-207ENST00000558919 TOB2Q14106 344 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-207ENST00000558919 RABL3Q5HYI8 236 aa5.01□□□□□ -1.61
VPS13C-207ENST00000558919 FAM47AQ5JRC9 791 aa5.01□□□□□ -1.61
VPS13C-207ENST00000558919 PRAMEF14Q5SWL7 426 aa5.01□□□□□ -1.61
VPS13C-207ENST00000558919 TUBA3EQ6PEY2 450 aa5.01□□□□□ -1.61
VPS13C-207ENST00000558919 DRICH1Q6PGQ1 229 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-207ENST00000558919 Q6ZVL8 140 aa5.01□□□□□ -1.61
VPS13C-207ENST00000558919 ZNF572Q7Z3I7 529 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-207ENST00000558919 HOXB13Q92826 284 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-207ENST00000558919 CPEB1Q9BZB8 566 aaKnown RBP5.01□□□□□ -1.61
VPS13C-207ENST00000558919 TRHDEQ9UKU6 1024 aa5.01□□□□□ -1.61
VPS13C-207ENST00000558919 PCDHGA2Q9Y5H1 932 aa5.01□□□□□ -1.61
VPS13C-207ENST00000558919 WASHC2CQ9Y4E1 1318 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 TBKBP1A7MCY6 615 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 FAM171A2A8MVW0 826 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 GRXCR1A8MXD5 290 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 PJA2O43164 708 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 RBP3P10745 1247 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 GSPT1P15170 499 aaKnown RBP5□□□□□ -1.61
VPS13C-207ENST00000558919 PTPN7P35236 360 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 SREBF1P36956 1147 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 IARSP41252 1262 aaKnown RBP5□□□□□ -1.61
VPS13C-207ENST00000558919 SP140Q13342 867 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 BMT2Q1RMZ1 405 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 PGM2L1Q6PCE3 622 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 USP51Q70EK9 711 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 XYLT1Q86Y38 959 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 TRMT2AQ8IZ69 625 aaKnown RBP5□□□□□ -1.61
VPS13C-207ENST00000558919 ABCF1Q8NE71 845 aaKnown RBP eCLIP5□□□□□ -1.61
VPS13C-207ENST00000558919 PGBD4Q96DM1 585 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 CEP95Q96GE4 821 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 FAXDC2Q96IV6 333 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 NDC1Q9BTX1 674 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 TMPRSS5Q9H3S3 457 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 MKS1Q9NXB0 559 aa5□□□□□ -1.61
VPS13C-207ENST00000558919 SHTN1A0MZ66 631 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 NPIPB8E9PQR5 432 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 TRIM24O15164 1050 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 ADCY6O43306 1168 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 RECQL4O94761 1208 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 IL2RBP14784 551 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 MGAT1P26572 445 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 ACVRL1P37023 503 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 WASP42768 502 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 GDF5P43026 501 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 PER3P56645 1201 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 EVA1CP58658 441 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 SLC25A3Q00325 362 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 NOMO1Q15155 1222 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 CLUL1Q15846 466 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 PTPROQ16827 1216 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 MFSD14BQ5SR56 506 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 ANKS6Q68DC2 871 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 PQLC1Q8N2U9 271 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.99□□□□□ -1.61
VPS13C-207ENST00000558919 MTMR8Q96EF0 704 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 CYFIP2Q96F07 1278 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 DCLRE1CQ96SD1 692 aaKnown RBP4.99□□□□□ -1.61
VPS13C-207ENST00000558919 UHRF1Q96T88 793 aaPredicted RBP4.99□□□□□ -1.61
VPS13C-207ENST00000558919 KCNH6Q9H252 994 aa4.99□□□□□ -1.61
VPS13C-207ENST00000558919 DMRT3Q9NQL9 472 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms