RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 FOXP1Q9H334 677 aaPredicted RBP15.02■□□□□ -0
VPS18-203ENST00000558855 FZD8Q9H461 694 aa15.02■□□□□ -0
VPS18-203ENST00000558855 COL4A3Q01955 1670 aa15.02□□□□□ -0.01
VPS18-203ENST00000558855 NOTCH4Q99466 2003 aa15.01□□□□□ -0.01
VPS18-203ENST00000558855 TEX28O15482 410 aa15.01□□□□□ -0.01
VPS18-203ENST00000558855 ALDH2P05091 517 aa15.01□□□□□ -0.01
VPS18-203ENST00000558855 XRCC6P12956 609 aaKnown RBP eCLIP15.01□□□□□ -0.01
VPS18-203ENST00000558855 ITIH3Q06033 890 aa15.01□□□□□ -0.01
VPS18-203ENST00000558855 SIGLEC14Q08ET2 396 aa15.01□□□□□ -0.01
VPS18-203ENST00000558855 NAB2Q15742 525 aa15.01□□□□□ -0.01
VPS18-203ENST00000558855 SLC27A1Q6PCB7 646 aa15.01□□□□□ -0.01
VPS18-203ENST00000558855 PADI6Q6TGC4 694 aa15.01□□□□□ -0.01
VPS18-203ENST00000558855 KCNK18Q7Z418 384 aa15.01□□□□□ -0.01
VPS18-203ENST00000558855 ALYREFQ86V81 257 aaKnown RBP15.01□□□□□ -0.01
VPS18-203ENST00000558855 KREMEN2Q8NCW0 462 aa15.01□□□□□ -0.01
VPS18-203ENST00000558855 CNNM3Q8NE01 707 aa15.01□□□□□ -0.01
VPS18-203ENST00000558855 PBXIP1Q96AQ6 731 aa15.01□□□□□ -0.01
VPS18-203ENST00000558855 CCDC43Q96MW1 224 aaKnown RBP15.01□□□□□ -0.01
VPS18-203ENST00000558855 FAM193BQ96PV7 902 aaPredicted RBP15.01□□□□□ -0.01
VPS18-203ENST00000558855 DZANK1Q9NVP4 752 aa15.01□□□□□ -0.01
VPS18-203ENST00000558855 GIT1Q9Y2X7 761 aa15.01□□□□□ -0.01
VPS18-203ENST00000558855 CITO14578 2027 aa15□□□□□ -0.01
VPS18-203ENST00000558855 SPATA31D3P0C874 917 aa15□□□□□ -0.01
VPS18-203ENST00000558855 RPL17P18621 184 aaKnown RBP15□□□□□ -0.01
VPS18-203ENST00000558855 CYP11B2P19099 503 aa15□□□□□ -0.01
VPS18-203ENST00000558855 KLRC2P26717 231 aa15□□□□□ -0.01
VPS18-203ENST00000558855 CDC25AP30304 524 aa15□□□□□ -0.01
VPS18-203ENST00000558855 MTHFRP42898 656 aa15□□□□□ -0.01
VPS18-203ENST00000558855 SAFBQ15424 915 aaKnown RBP eCLIP15□□□□□ -0.01
VPS18-203ENST00000558855 CES5AQ6NT32 575 aa15□□□□□ -0.01
VPS18-203ENST00000558855 SPATA31D4Q6ZUB0 917 aa15□□□□□ -0.01
VPS18-203ENST00000558855 GPR149Q86SP6 731 aa15□□□□□ -0.01
VPS18-203ENST00000558855 CABP7Q86V35 215 aa15□□□□□ -0.01
VPS18-203ENST00000558855 GLYCTKQ8IVS8 523 aa15□□□□□ -0.01
VPS18-203ENST00000558855 DAW1Q8N136 415 aa15□□□□□ -0.01
VPS18-203ENST00000558855 HASPINQ8TF76 798 aa15□□□□□ -0.01
VPS18-203ENST00000558855 RPS6KC1Q96S38 1066 aa15□□□□□ -0.01
VPS18-203ENST00000558855 MMTAG2Q9BU76 263 aaKnown RBP15□□□□□ -0.01
VPS18-203ENST00000558855 MAN1C1Q9NR34 630 aa15□□□□□ -0.01
VPS18-203ENST00000558855 SNTG2Q9NY99 539 aa15□□□□□ -0.01
VPS18-203ENST00000558855 KANSL3Q9P2N6 904 aa15□□□□□ -0.01
VPS18-203ENST00000558855 PARP2Q9UGN5 583 aa15□□□□□ -0.01
VPS18-203ENST00000558855 USP34Q70CQ2 3546 aa15□□□□□ -0.01
VPS18-203ENST00000558855 E9PMD0 336 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 RFPL2O75678 378 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 PRKCBP05771 671 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 URODP06132 367 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 LIG1P18858 919 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 U2AF2P26368 475 aaKnown RBP eCLIP14.99□□□□□ -0.01
VPS18-203ENST00000558855 GLUD2P49448 558 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 RBM25P49756 843 aaKnown RBP14.99□□□□□ -0.01
VPS18-203ENST00000558855 FXR2P51116 673 aaKnown RBP eCLIP14.99□□□□□ -0.01
VPS18-203ENST00000558855 DSG1Q02413 1049 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 TCF15Q12870 199 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 PCBP1Q15365 356 aaKnown RBP eCLIP14.99□□□□□ -0.01
VPS18-203ENST00000558855 FAM187BQ17R55 369 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 NT5DC1Q5TFE4 455 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 FUT10Q6P4F1 479 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 PRSS55Q6UWB4 352 aaPredicted RBP14.99□□□□□ -0.01
VPS18-203ENST00000558855 FBXL6Q8N531 539 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 MCPH1Q8NEM0 835 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 NACC1Q96RE7 527 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 TRIM6Q9C030 488 aaPredicted RBP14.99□□□□□ -0.01
VPS18-203ENST00000558855 BHMT2Q9H2M3 363 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 SFXN1Q9H9B4 322 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 UBN1Q9NPG3 1134 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 MRPL17Q9NRX2 175 aaKnown RBP14.99□□□□□ -0.01
VPS18-203ENST00000558855 CHST7Q9NS84 486 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 PRMT7Q9NVM4 692 aaPredicted RBP14.99□□□□□ -0.01
VPS18-203ENST00000558855 LIMD1Q9UGP4 676 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 MYH15Q9Y2K3 1946 aa14.99□□□□□ -0.01
VPS18-203ENST00000558855 ARHGEF35A5YM69 484 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 CASTOR2A6NHX0 329 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 RECQL4O94761 1208 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 KIF4AO95239 1232 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 CCT6AP40227 531 aaKnown RBP14.98□□□□□ -0.01
VPS18-203ENST00000558855 HMGN5P82970 282 aaKnown RBP14.98□□□□□ -0.01
VPS18-203ENST00000558855 GRIK3Q13003 919 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 MAPK7Q13164 816 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 PTGDRQ13258 359 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 GIT2Q14161 759 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 RTP2Q5QGT7 225 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 TAS1R3Q7RTX0 852 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 TMEM130Q8N3G9 435 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 CEP120Q8N960 986 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 IGSF22Q8N9C0 903 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 TDRD5Q8NAT2 981 aaKnown RBP14.98□□□□□ -0.01
VPS18-203ENST00000558855 ZNF707Q96C28 371 aaPredicted RBP14.98□□□□□ -0.01
VPS18-203ENST00000558855 ZSCAN31Q96LW9 406 aaPredicted RBP14.98□□□□□ -0.01
VPS18-203ENST00000558855 MFSD14AQ96MC6 490 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 RIPOR3Q96MK2 946 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 NECTIN4Q96NY8 510 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 RUSC1Q9BVN2 902 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 RXFP1Q9HBX9 757 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 SH2B1Q9NRF2 756 aaPredicted RBP14.98□□□□□ -0.01
VPS18-203ENST00000558855 DDX19AQ9NUU7 478 aaKnown RBP14.98□□□□□ -0.01
VPS18-203ENST00000558855 KIAA1024Q9UPX6 916 aa14.98□□□□□ -0.01
VPS18-203ENST00000558855 ANK1P16157 1881 aa14.97□□□□□ -0.01
VPS18-203ENST00000558855 MYO15AQ9UKN7 3530 aa14.97□□□□□ -0.01
VPS18-203ENST00000558855 DMDP11532 3685 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms