RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 CCR3P51677 355 aa13.39□□□□□ -0.27
SMAD3-206ENST00000558739 ZNF252P-AS1Q0IIN9 211 aa13.39□□□□□ -0.27
SMAD3-206ENST00000558739 SLC5A9Q2M3M2 681 aa13.39□□□□□ -0.27
SMAD3-206ENST00000558739 WDR44Q5JSH3 913 aa13.39□□□□□ -0.27
SMAD3-206ENST00000558739 RTP2Q5QGT7 225 aa13.39□□□□□ -0.27
SMAD3-206ENST00000558739 UBXN11Q5T124 520 aa13.39□□□□□ -0.27
SMAD3-206ENST00000558739 TANGO2Q6ICL3 276 aa13.39□□□□□ -0.27
SMAD3-206ENST00000558739 Q6ZS52 159 aa13.39□□□□□ -0.27
SMAD3-206ENST00000558739 PLA2G4DQ86XP0 818 aa13.39□□□□□ -0.27
SMAD3-206ENST00000558739 TICAM2Q86XR7 235 aa13.39□□□□□ -0.27
SMAD3-206ENST00000558739 C12orf50Q8NA57 414 aaPredicted RBP13.39□□□□□ -0.27
SMAD3-206ENST00000558739 IGDCC4Q8TDY8 1250 aa13.39□□□□□ -0.27
SMAD3-206ENST00000558739 MBOAT7Q96N66 472 aa13.39□□□□□ -0.27
SMAD3-206ENST00000558739 GCOM2Q9BZD3 368 aaPredicted RBP13.39□□□□□ -0.27
SMAD3-206ENST00000558739 RNF39Q9H2S5 420 aa13.39□□□□□ -0.27
SMAD3-206ENST00000558739 RBM12Q9NTZ6 932 aaKnown RBP13.39□□□□□ -0.27
SMAD3-206ENST00000558739 EML5Q05BV3 1969 aa13.39□□□□□ -0.27
SMAD3-206ENST00000558739 SPTA1P02549 2419 aa13.38□□□□□ -0.27
SMAD3-206ENST00000558739 ADAM12O43184 909 aa13.38□□□□□ -0.27
SMAD3-206ENST00000558739 C8AP07357 584 aa13.38□□□□□ -0.27
SMAD3-206ENST00000558739 FCARP24071 287 aa13.38□□□□□ -0.27
SMAD3-206ENST00000558739 SREBF1P36956 1147 aa13.38□□□□□ -0.27
SMAD3-206ENST00000558739 SCNN1GP51170 649 aa13.38□□□□□ -0.27
SMAD3-206ENST00000558739 NOVA1P51513 510 aaKnown RBP13.38□□□□□ -0.27
SMAD3-206ENST00000558739 DSC1Q08554 894 aa13.38□□□□□ -0.27
SMAD3-206ENST00000558739 SOWAHCQ53LP3 525 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-206ENST00000558739 FUT10Q6P4F1 479 aa13.38□□□□□ -0.27
SMAD3-206ENST00000558739 CATSPER4Q7RTX7 472 aa13.38□□□□□ -0.27
SMAD3-206ENST00000558739 ZFP42Q96MM3 310 aa13.38□□□□□ -0.27
SMAD3-206ENST00000558739 LMAN1LQ9HAT1 526 aa13.38□□□□□ -0.27
SMAD3-206ENST00000558739 SSX2IPQ9Y2D8 614 aa13.38□□□□□ -0.27
SMAD3-206ENST00000558739 MRPS17Q9Y2R5 130 aaKnown RBP13.38□□□□□ -0.27
SMAD3-206ENST00000558739 PDCD11Q14690 1871 aaKnown RBP13.38□□□□□ -0.27
SMAD3-206ENST00000558739 DDAH1O94760 285 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 PSAPP07602 524 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 SKIP12755 728 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 CEBPBP17676 345 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 ZNF76P36508 570 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 MLH1P40692 756 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 CXCL12P48061 93 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 RBM25P49756 843 aaKnown RBP13.37□□□□□ -0.27
SMAD3-206ENST00000558739 TRDNQ13061 729 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 ZNF746Q6NUN9 644 aaPredicted RBP13.37□□□□□ -0.27
SMAD3-206ENST00000558739 MAMSTRQ6ZN01 415 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 CEP68Q76N32 757 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 MRPL10Q7Z7H8 261 aaKnown RBP13.37□□□□□ -0.27
SMAD3-206ENST00000558739 SMG8Q8ND04 991 aaKnown RBP13.37□□□□□ -0.27
SMAD3-206ENST00000558739 PGBD4Q96DM1 585 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 MCRS1Q96EZ8 462 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 FAM167AQ96KS9 214 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 NLRP4Q96MN2 994 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 CEP89Q96ST8 783 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 GAD1Q99259 594 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 ZNF577Q9BSK1 485 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 SCNM1Q9BWG6 230 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 LNPKQ9C0E8 428 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 MINDY3Q9H8M7 445 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 AGPAT5Q9NUQ2 364 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 MIOSQ9NXC5 875 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 DNMT3BQ9UBC3 853 aaKnown RBP13.37□□□□□ -0.27
SMAD3-206ENST00000558739 HES2Q9Y543 173 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 PCDHA10Q9Y5I2 948 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 NCANO14594 1321 aa13.37□□□□□ -0.27
SMAD3-206ENST00000558739 ATG2BQ96BY7 2078 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 ARL5CA6NH57 179 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 E7EWF7 191 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 ECI2O75521 394 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 ZNF806P0C7X5 589 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 CHRNB1P11230 501 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 SMARCA1P28370 1054 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 HOXA11P31270 313 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-206ENST00000558739 PPP2R5DQ14738 602 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 TARBP2Q15633 366 aaKnown RBP13.36□□□□□ -0.27
SMAD3-206ENST00000558739 PABPC1LQ4VXU2 614 aaKnown RBP13.36□□□□□ -0.27
SMAD3-206ENST00000558739 PPM1LQ5SGD2 360 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 LIN9Q5TKA1 542 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 KIAA1211LQ6NV74 962 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 NIPA1Q7RTP0 329 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 RHPN2Q8IUC4 686 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 MB21D2Q8IYB1 491 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-206ENST00000558739 SMAP1Q8IYB5 467 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-206ENST00000558739 SLC7A14Q8TBB6 771 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 CRYGNQ8WXF5 182 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 GJA10Q969M2 543 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 PAAF1Q9BRP4 392 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 IFT122Q9HBG6 1241 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 RIC8AQ9NPQ8 531 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 FNIP2Q9P278 1114 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 SAMM50Q9Y512 469 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 CNTNAP2Q9UHC6 1331 aa13.36□□□□□ -0.27
SMAD3-206ENST00000558739 FOXD2O60548 495 aaPredicted RBP13.35□□□□□ -0.27
SMAD3-206ENST00000558739 NAPAP54920 295 aa13.35□□□□□ -0.27
SMAD3-206ENST00000558739 PTH1RQ03431 593 aa13.35□□□□□ -0.27
SMAD3-206ENST00000558739 SART3Q15020 963 aaKnown RBP13.35□□□□□ -0.27
SMAD3-206ENST00000558739 USP41Q3LFD5 358 aa13.35□□□□□ -0.27
SMAD3-206ENST00000558739 MTERF2Q49AM1 385 aa13.35□□□□□ -0.27
SMAD3-206ENST00000558739 RALYLQ86SE5 291 aaKnown RBP13.35□□□□□ -0.27
SMAD3-206ENST00000558739 KBTBD6Q86V97 674 aa13.35□□□□□ -0.27
SMAD3-206ENST00000558739 LONP2Q86WA8 852 aa13.35□□□□□ -0.27
SMAD3-206ENST00000558739 ZNF710Q8N1W2 664 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms