RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 PTPN14Q15678 1187 aa12.78□□□□□ -0.36
CASC4-205ENST00000558735 RARS2Q5T160 578 aaKnown RBP12.78□□□□□ -0.36
CASC4-205ENST00000558735 KIAA1841Q6NSI8 718 aa12.78□□□□□ -0.36
CASC4-205ENST00000558735 CDR2LQ86X02 465 aaPredicted RBP12.78□□□□□ -0.36
CASC4-205ENST00000558735 ADSSL1Q8N142 457 aa12.78□□□□□ -0.36
CASC4-205ENST00000558735 TMEM87AQ8NBN3 555 aa12.78□□□□□ -0.36
CASC4-205ENST00000558735 GSTCDQ8NEC7 633 aa12.78□□□□□ -0.36
CASC4-205ENST00000558735 CCDC51Q96ER9 411 aa12.78□□□□□ -0.36
CASC4-205ENST00000558735 ZSCAN31Q96LW9 406 aaPredicted RBP12.78□□□□□ -0.36
CASC4-205ENST00000558735 ZFP42Q96MM3 310 aa12.78□□□□□ -0.36
CASC4-205ENST00000558735 KLHL5Q96PQ7 755 aa12.78□□□□□ -0.36
CASC4-205ENST00000558735 NACC1Q96RE7 527 aa12.78□□□□□ -0.36
CASC4-205ENST00000558735 POLR3FQ9H1D9 316 aaPredicted RBP12.78□□□□□ -0.36
CASC4-205ENST00000558735 TSHZ2Q9NRE2 1034 aa12.78□□□□□ -0.36
CASC4-205ENST00000558735 DBR1Q9UK59 544 aaKnown RBP12.78□□□□□ -0.36
CASC4-205ENST00000558735 SSBP05455 408 aaKnown RBP eCLIP12.77□□□□□ -0.37
CASC4-205ENST00000558735 AKAP5P24588 427 aa12.77□□□□□ -0.37
CASC4-205ENST00000558735 RPA1P27694 616 aa12.77□□□□□ -0.37
CASC4-205ENST00000558735 MLH1P40692 756 aa12.77□□□□□ -0.37
CASC4-205ENST00000558735 RBM25P49756 843 aaKnown RBP12.77□□□□□ -0.37
CASC4-205ENST00000558735 SCNN1GP51170 649 aa12.77□□□□□ -0.37
CASC4-205ENST00000558735 DSC1Q08554 894 aa12.77□□□□□ -0.37
CASC4-205ENST00000558735 ECM1Q16610 540 aa12.77□□□□□ -0.37
CASC4-205ENST00000558735 ATAT1Q5SQI0 421 aa12.77□□□□□ -0.37
CASC4-205ENST00000558735 TDRD5Q8NAT2 981 aaKnown RBP12.77□□□□□ -0.37
CASC4-205ENST00000558735 APOL6Q9BWW8 343 aa12.77□□□□□ -0.37
CASC4-205ENST00000558735 SEMA4AQ9H3S1 761 aa12.77□□□□□ -0.37
CASC4-205ENST00000558735 SMOC2Q9H3U7 446 aa12.77□□□□□ -0.37
CASC4-205ENST00000558735 FZD8Q9H461 694 aa12.77□□□□□ -0.37
CASC4-205ENST00000558735 NXF3Q9H4D5 531 aaKnown RBP12.77□□□□□ -0.37
CASC4-205ENST00000558735 DZANK1Q9NVP4 752 aa12.77□□□□□ -0.37
CASC4-205ENST00000558735 MARCH5Q9NX47 278 aa12.77□□□□□ -0.37
CASC4-205ENST00000558735 GIT1Q9Y2X7 761 aa12.77□□□□□ -0.37
CASC4-205ENST00000558735 MYO10Q9HD67 2058 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 LRRIQ4A6NIV6 560 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 TTLL13PA6NNM8 815 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 F8W810 466 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 OR52Z1P0C646 297 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 NPR3P17342 541 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 CYP11B2P19099 503 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 AOC1P19801 751 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 KLRC2P26717 231 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 OR1G1P47890 313 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 TOB1P50616 345 aaPredicted RBP12.76□□□□□ -0.37
CASC4-205ENST00000558735 CLCN4P51793 760 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 HMGN5P82970 282 aaKnown RBP12.76□□□□□ -0.37
CASC4-205ENST00000558735 ORC2Q13416 577 aaPredicted RBP12.76□□□□□ -0.37
CASC4-205ENST00000558735 C8orf34Q49A92 452 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 TTC38Q5R3I4 469 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 KIAA0319Q5VV43 1072 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 CWF19L1Q69YN2 538 aaKnown RBP12.76□□□□□ -0.37
CASC4-205ENST00000558735 POTEGQ6S5H5 508 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 TMC5Q6UXY8 1006 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 PPFIBP1Q86W92 1011 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 CCDC105Q8IYK2 499 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 RNF168Q8IYW5 571 aaPredicted RBP12.76□□□□□ -0.37
CASC4-205ENST00000558735 BSNDQ8WZ55 320 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 CCDC43Q96MW1 224 aaKnown RBP12.76□□□□□ -0.37
CASC4-205ENST00000558735 POLD4Q9HCU8 107 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 SH2B1Q9NRF2 756 aaPredicted RBP12.76□□□□□ -0.37
CASC4-205ENST00000558735 MRPL17Q9NRX2 175 aaKnown RBP12.76□□□□□ -0.37
CASC4-205ENST00000558735 STK39Q9UEW8 545 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 LIMD1Q9UGP4 676 aa12.76□□□□□ -0.37
CASC4-205ENST00000558735 PRG3Q9Y2Y8 225 aaPredicted RBP12.76□□□□□ -0.37
CASC4-205ENST00000558735 C2CD2LO14523 706 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 NPTXRO95502 500 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 SOD2P04179 222 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 ASGR2P07307 311 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 U2AF2P26368 475 aaKnown RBP eCLIP12.75□□□□□ -0.374e-6■■■■□ 26.4
CASC4-205ENST00000558735 EP300Q09472 2414 aaPredicted RBP12.75□□□□□ -0.37
CASC4-205ENST00000558735 NBR1Q14596 966 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 FAM187BQ17R55 369 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 SLC27A1Q6PCB7 646 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 PADI6Q6TGC4 694 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 PPP4R3CPQ6ZMV5 832 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 GPR149Q86SP6 731 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 CABP7Q86V35 215 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 NOSTRINQ8IVI9 506 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 FAM184AQ8NB25 1140 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 MCPH1Q8NEM0 835 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 RPS6KC1Q96S38 1066 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 RTP3Q9BQQ7 232 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 EMILIN2Q9BXX0 1053 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 TRIM6Q9C030 488 aaPredicted RBP12.75□□□□□ -0.37
CASC4-205ENST00000558735 MFSD1Q9H3U5 465 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 KLK14Q9P0G3 267 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 USP20Q9Y2K6 914 aa12.75□□□□□ -0.37
CASC4-205ENST00000558735 DNAH14Q0VDD8 3507 aa12.74□□□□□ -0.37
CASC4-205ENST00000558735 MUTP22033 750 aa12.74□□□□□ -0.37
CASC4-205ENST00000558735 TRAPPC10P48553 1259 aa12.74□□□□□ -0.37
CASC4-205ENST00000558735 FXR2P51116 673 aaKnown RBP eCLIP12.74□□□□□ -0.37
CASC4-205ENST00000558735 PDIA5Q14554 519 aa12.74□□□□□ -0.37
CASC4-205ENST00000558735 CDCA2Q69YH5 1023 aaPredicted RBP12.74□□□□□ -0.37
CASC4-205ENST00000558735 ERMNQ8TAM6 284 aa12.74□□□□□ -0.37
CASC4-205ENST00000558735 RABGGTAQ92696 567 aa12.74□□□□□ -0.37
CASC4-205ENST00000558735 PRIMPOLQ96LW4 560 aa12.74□□□□□ -0.37
CASC4-205ENST00000558735 HERC2P3Q9BVR0 1158 aa12.74□□□□□ -0.37
CASC4-205ENST00000558735 COLEC11Q9BWP8 271 aa12.74□□□□□ -0.37
CASC4-205ENST00000558735 GPR62Q9BZJ7 368 aa12.74□□□□□ -0.37
CASC4-205ENST00000558735 CXCL16Q9H2A7 254 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms