RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 ANKRD63C9JTQ0 380 aa19.1■□□□□ 0.65
TPM1-214ENST00000558544 EOMESO95936 686 aa19.1■□□□□ 0.65
TPM1-214ENST00000558544 FGFR1P11362 822 aa19.1■□□□□ 0.65
TPM1-214ENST00000558544 PBX2P40425 430 aa19.1■□□□□ 0.65
TPM1-214ENST00000558544 LRIT3Q3SXY7 679 aa19.1■□□□□ 0.65
TPM1-214ENST00000558544 NELFCDQ8IXH7 590 aa19.1■□□□□ 0.65
TPM1-214ENST00000558544 SPATA20Q8TB22 786 aa19.1■□□□□ 0.65
TPM1-214ENST00000558544 YME1L1Q96TA2 773 aa19.1■□□□□ 0.65
TPM1-214ENST00000558544 PBX4Q9BYU1 374 aa19.1■□□□□ 0.65
TPM1-214ENST00000558544 HAPLN2Q9GZV7 340 aa19.1■□□□□ 0.65
TPM1-214ENST00000558544 RNF19AQ9NV58 838 aa19.1■□□□□ 0.65
TPM1-214ENST00000558544 RMND1Q9NWS8 449 aa19.1■□□□□ 0.65
TPM1-214ENST00000558544 GDAQ9Y2T3 454 aa19.1■□□□□ 0.65
TPM1-214ENST00000558544 DGKIO75912 1065 aa19.09■□□□□ 0.65
TPM1-214ENST00000558544 MBD3O95983 291 aa19.09■□□□□ 0.65
TPM1-214ENST00000558544 ITGA4P13612 1032 aa19.09■□□□□ 0.65
TPM1-214ENST00000558544 MYOGP15173 224 aa19.09■□□□□ 0.65
TPM1-214ENST00000558544 HOXD13P35453 343 aa19.09■□□□□ 0.65
TPM1-214ENST00000558544 HTRA4P83105 476 aaPredicted RBP19.09■□□□□ 0.65
TPM1-214ENST00000558544 NOLC1Q14978 699 aaKnown RBP eCLIP19.09■□□□□ 0.65
TPM1-214ENST00000558544 APBB1IPQ7Z5R6 666 aaPredicted RBP19.09■□□□□ 0.65
TPM1-214ENST00000558544 MRPL10Q7Z7H8 261 aaKnown RBP19.09■□□□□ 0.65
TPM1-214ENST00000558544 CEP120Q8N960 986 aa19.09■□□□□ 0.65
TPM1-214ENST00000558544 ZNF507Q8TCN5 953 aa19.09■□□□□ 0.65
TPM1-214ENST00000558544 HELQQ8TDG4 1101 aa19.09■□□□□ 0.65
TPM1-214ENST00000558544 PGBD4Q96DM1 585 aa19.09■□□□□ 0.65
TPM1-214ENST00000558544 GSDMAQ96QA5 445 aa19.09■□□□□ 0.65
TPM1-214ENST00000558544 NUP62CLQ9H1M0 184 aa19.09■□□□□ 0.65
TPM1-214ENST00000558544 RNF39Q9H2S5 420 aa19.09■□□□□ 0.65
TPM1-214ENST00000558544 TMEM206Q9H813 350 aa19.09■□□□□ 0.65
TPM1-214ENST00000558544 RC3H2Q9HBD1 1191 aaKnown RBP19.09■□□□□ 0.65
TPM1-214ENST00000558544 YBX2Q9Y2T7 364 aaKnown RBP19.09■□□□□ 0.65
TPM1-214ENST00000558544 LCHNA4D1U4 455 aa19.08■□□□□ 0.65
TPM1-214ENST00000558544 CLDN3O15551 220 aa19.08■□□□□ 0.65
TPM1-214ENST00000558544 MCF2P10911 925 aa19.08■□□□□ 0.65
TPM1-214ENST00000558544 SMAD3P84022 425 aaKnown RBP19.08■□□□□ 0.65
TPM1-214ENST00000558544 MCL1Q07820 350 aa19.08■□□□□ 0.65
TPM1-214ENST00000558544 BMT2Q1RMZ1 405 aa19.08■□□□□ 0.65
TPM1-214ENST00000558544 PAN2Q504Q3 1202 aaKnown RBP19.08■□□□□ 0.65
TPM1-214ENST00000558544 CLLU1OSQ5K130 101 aa19.08■□□□□ 0.65
TPM1-214ENST00000558544 AGMOQ6ZNB7 445 aa19.08■□□□□ 0.65
TPM1-214ENST00000558544 SMYD4Q8IYR2 804 aaPredicted RBP19.08■□□□□ 0.65
TPM1-214ENST00000558544 HACE1Q8IYU2 909 aa19.08■□□□□ 0.65
TPM1-214ENST00000558544 ZNF689Q96CS4 500 aaPredicted RBP19.08■□□□□ 0.65
TPM1-214ENST00000558544 RAD9AQ99638 391 aa19.08■□□□□ 0.65
TPM1-214ENST00000558544 SNTG2Q9NY99 539 aa19.08■□□□□ 0.65
TPM1-214ENST00000558544 MAN1B1Q9UKM7 699 aa19.08■□□□□ 0.65
TPM1-214ENST00000558544 PCDHA11Q9Y5I1 949 aa19.08■□□□□ 0.65
TPM1-214ENST00000558544 CHD9Q3L8U1 2897 aa19.08■□□□□ 0.64
TPM1-214ENST00000558544 TBKBP1A7MCY6 615 aa19.07■□□□□ 0.64
TPM1-214ENST00000558544 HOXA2O43364 376 aa19.07■□□□□ 0.64
TPM1-214ENST00000558544 AKAP5P24588 427 aa19.07■□□□□ 0.64
TPM1-214ENST00000558544 OSTNP61366 133 aa19.07■□□□□ 0.64
TPM1-214ENST00000558544 RAB30Q15771 203 aa19.07■□□□□ 0.64
TPM1-214ENST00000558544 ISM2Q6H9L7 571 aa19.07■□□□□ 0.64
TPM1-214ENST00000558544 THNSL1Q8IYQ7 743 aa19.07■□□□□ 0.64
TPM1-214ENST00000558544 ABI1Q8IZP0 508 aa19.07■□□□□ 0.64
TPM1-214ENST00000558544 RSAD1Q9HA92 442 aa19.07■□□□□ 0.64
TPM1-214ENST00000558544 PARP2Q9UGN5 583 aa19.07■□□□□ 0.64
TPM1-214ENST00000558544 MSRAQ9UJ68 235 aa19.07■□□□□ 0.64
TPM1-214ENST00000558544 INSL6Q9Y581 213 aa19.07■□□□□ 0.64
TPM1-214ENST00000558544 BIN1O00499 593 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 SOX1O00570 391 aaPredicted RBP19.06■□□□□ 0.64
TPM1-214ENST00000558544 RECQL4O94761 1208 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 CA3P07451 260 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 DNAJB2P25686 324 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 SEZ6Q53EL9 994 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 ZNF658Q5TYW1 1059 aaPredicted RBP19.06■□□□□ 0.64
TPM1-214ENST00000558544 TMEM192Q8IY95 271 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 POMGNT1Q8WZA1 660 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 MSTO1Q9BUK6 570 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 TMEM117Q9H0C3 514 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 GBP3Q9H0R5 595 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 NKX2-4Q9H2Z4 354 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 MAPK8IP1Q9UQF2 711 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 INPP5FQ9Y2H2 1132 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 ADSSP30520 456 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 MLH1P40692 756 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 GRM5P41594 1212 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 BTG3Q14201 252 aaPredicted RBP19.06■□□□□ 0.64
TPM1-214ENST00000558544 KNOP1Q1ED39 458 aaKnown RBP19.06■□□□□ 0.64
TPM1-214ENST00000558544 HABP4Q5JVS0 413 aaKnown RBP19.06■□□□□ 0.64
TPM1-214ENST00000558544 SLFN12LQ6IEE8 588 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 GLB1LQ6UWU2 654 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 CASD1Q96PB1 797 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 CCDC94Q9BW85 323 aaPredicted RBP19.06■□□□□ 0.64
TPM1-214ENST00000558544 KLK14Q9P0G3 267 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 KIAA1468Q9P260 1216 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 STYXL1Q9Y6J8 313 aa19.06■□□□□ 0.64
TPM1-214ENST00000558544 A0A0B4J269 797 aa19.05■□□□□ 0.64
TPM1-214ENST00000558544 OGTO15294 1046 aa19.05■□□□□ 0.64
TPM1-214ENST00000558544 TGFB1I1O43294 461 aa19.05■□□□□ 0.64
TPM1-214ENST00000558544 OFD1O75665 1012 aa19.05■□□□□ 0.64
TPM1-214ENST00000558544 ARHGEF15O94989 841 aa19.05■□□□□ 0.64
TPM1-214ENST00000558544 ZBTB41Q5SVQ8 909 aa19.05■□□□□ 0.64
TPM1-214ENST00000558544 ARMCX5Q6P1M9 558 aa19.05■□□□□ 0.64
TPM1-214ENST00000558544 CMTR2Q8IYT2 770 aaKnown RBP19.05■□□□□ 0.64
TPM1-214ENST00000558544 SP7Q8TDD2 431 aaPredicted RBP19.05■□□□□ 0.64
TPM1-214ENST00000558544 LRCH3Q96II8 777 aa19.05■□□□□ 0.64
TPM1-214ENST00000558544 ZFP42Q96MM3 310 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms