RNA–Protein interactions for RNA: ENST00000558528.1

LDLR-209, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 456 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-209ENST00000558528 CSADQ9Y600 493 aa5.76□□□□□ -1.49
LDLR-209ENST00000558528 TCRBV16S1A1N1A0A5B0 115 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 ESYT2A0FGR8 921 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 SMIM22K7EJ46 135 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 TNFRSF10AO00220 468 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 ZBTB5O15062 677 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 CBFA2T2O43439 604 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 GDF11O95390 407 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 PLEKHA8P1O95397 391 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 CFBP00751 764 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 TP53P04637 393 aaPredicted RBP5.75□□□□□ -1.49
LDLR-209ENST00000558528 ITGA4P13612 1032 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 EPHA1P21709 976 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 GUCY1A2P33402 732 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 MAN1A1P33908 653 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 STAT2P52630 851 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 ERVK-24P63145 666 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 FKBP1BP68106 108 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 IKQ13123 557 aaPredicted RBP5.75□□□□□ -1.49
LDLR-209ENST00000558528 RESTQ13127 1097 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 COL9A3Q14050 684 aaPredicted RBP5.75□□□□□ -1.49
LDLR-209ENST00000558528 ZNF460Q14592 562 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 PKN1Q16512 942 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 KLHL40Q2TBA0 621 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 FGD2Q7Z6J4 655 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 SYT9Q86SS6 491 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 C11orf74Q86VG3 221 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 RAB11FIP4Q86YS3 637 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 HID1Q8IV36 788 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 NOSTRINQ8IVI9 506 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 TMEM192Q8IY95 271 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 SMAP1Q8IYB5 467 aaPredicted RBP5.75□□□□□ -1.49
LDLR-209ENST00000558528 DIS3L2Q8IYB7 885 aaKnown RBP5.75□□□□□ -1.49
LDLR-209ENST00000558528 BLIDQ8IZY5 108 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 DAGLBQ8NCG7 672 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 USP33Q8TEY7 942 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 CUL5Q93034 780 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 CLIP3Q96DZ5 547 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 MRGPRX3Q96LB0 322 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 ELAC2Q9BQ52 826 aaKnown RBP5.75□□□□□ -1.49
LDLR-209ENST00000558528 PYM1Q9BRP8 204 aaKnown RBP5.75□□□□□ -1.49
LDLR-209ENST00000558528 PHF20Q9BVI0 1012 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 AMNQ9BXJ7 453 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 ZMYND12Q9H0C1 365 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 MAP3K20Q9NYL2 800 aaKnown RBP5.75□□□□□ -1.49
LDLR-209ENST00000558528 RTEL1Q9NZ71 1219 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 TMOD4Q9NZQ9 345 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 APEX2Q9UBZ4 518 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 TAGLN3Q9UI15 199 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 DNMT3LQ9UJW3 386 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 RCOR1Q9UKL0 485 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 ISY1Q9ULR0 285 aaKnown RBP5.75□□□□□ -1.49
LDLR-209ENST00000558528 TRIM33Q9UPN9 1127 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 EMC9Q9Y3B6 208 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 RABGAP1Q9Y3P9 1069 aa5.75□□□□□ -1.49
LDLR-209ENST00000558528 DDX49Q9Y6V7 483 aaKnown RBP5.75□□□□□ -1.49
LDLR-209ENST00000558528 MORC2Q9Y6X9 1032 aaPredicted RBP5.75□□□□□ -1.49
LDLR-209ENST00000558528 CNTNAP5Q8WYK1 1306 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 SMCO2A6NFE2 343 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 TMEM232C9JQI7 657 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 GPR25O00155 361 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 LAD1O00515 517 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 CXCL11O14625 94 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 GAS7O60861 476 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 ZBED4O75132 1171 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 PPP6R2O75170 966 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 TCEA3O75764 348 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 NDUFB10O96000 172 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 CPP00450 1065 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 MAOBP27338 520 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 POLR2BP30876 1174 aaKnown RBP5.74□□□□□ -1.49
LDLR-209ENST00000558528 HOXC12P31275 282 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 LSSP48449 732 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 NAPAP54920 295 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 BACE1P56817 501 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 IL2P60568 153 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 RNF4P78317 190 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 GUCY1B3Q02153 619 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 PPATQ06203 517 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 RING1Q06587 406 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 PKP1Q13835 747 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 KRT72Q14CN4 511 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 STK38Q15208 465 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 MAPRE1Q15691 268 aaKnown RBP5.74□□□□□ -1.49
LDLR-209ENST00000558528 ZC3H12AQ5D1E8 599 aaKnown RBP5.74□□□□□ -1.49
LDLR-209ENST00000558528 NBPF12Q5TAG4 269 aaPredicted RBP5.74□□□□□ -1.49
LDLR-209ENST00000558528 PIK3R6Q5UE93 754 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 WDR78Q5VTH9 848 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 ADALQ6DHV7 355 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 FOXR1Q6PIV2 292 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 HEATR3Q7Z4Q2 680 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 FBXO11Q86XK2 927 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 SIAH1Q8IUQ4 282 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 ADGRF4Q8IZF3 695 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 ZNF513Q8N8E2 541 aaPredicted RBP5.74□□□□□ -1.49
LDLR-209ENST00000558528 ZNF507Q8TCN5 953 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 COG1Q8WTW3 980 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 CYB5D2Q8WUJ1 264 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 C12orf42Q96LP6 360 aa5.74□□□□□ -1.49
LDLR-209ENST00000558528 WRNIP1Q96S55 665 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms