RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 ATP2C1P98194 919 aaPredicted RBP13.16□□□□□ -0.3
HERC1-202ENST00000558324 DSC1Q08554 894 aa13.16□□□□□ -0.3
HERC1-202ENST00000558324 RARS2Q5T160 578 aaKnown RBP13.16□□□□□ -0.3
HERC1-202ENST00000558324 KANK3Q6NY19 840 aa13.16□□□□□ -0.3
HERC1-202ENST00000558324 C12orf76Q8N812 135 aaPredicted RBP13.16□□□□□ -0.3
HERC1-202ENST00000558324 RABGGTAQ92696 567 aa13.16□□□□□ -0.3
HERC1-202ENST00000558324 PLIN2Q99541 437 aa13.16□□□□□ -0.3
HERC1-202ENST00000558324 CCDC113Q9H0I3 377 aa13.16□□□□□ -0.3
HERC1-202ENST00000558324 TSHZ2Q9NRE2 1034 aa13.16□□□□□ -0.3
HERC1-202ENST00000558324 CACNG4Q9UBN1 327 aa13.16□□□□□ -0.3
HERC1-202ENST00000558324 DNM3Q9UQ16 869 aa13.16□□□□□ -0.3
HERC1-202ENST00000558324 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.16□□□□□ -0.3
HERC1-202ENST00000558324 STK24Q9Y6E0 443 aa13.16□□□□□ -0.3
HERC1-202ENST00000558324 C5orf42Q9H799 3197 aa13.16□□□□□ -0.3
HERC1-202ENST00000558324 VWA3AA6NCI4 1184 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 CCDC169A6NNP5 214 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 LOC730098B7Z3J9 87 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 ACKR2O00590 384 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 N4BP3O15049 544 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 GPR37L1O60883 481 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 HIP1RO75146 1068 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 NR1I2O75469 434 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 URODP06132 367 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 HOXB8P17481 243 aaPredicted RBP13.15□□□□□ -0.3
HERC1-202ENST00000558324 PEX3P56589 373 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 GRIK3Q13003 919 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 GIT2Q14161 759 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 FAM187BQ17R55 369 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 TPRNQ4KMQ1 711 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 EEF1DP3Q658K8 133 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 LARP1BQ659C4 914 aaKnown RBP13.15□□□□□ -0.3
HERC1-202ENST00000558324 CES5AQ6NT32 575 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 TAS1R1Q7RTX1 841 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 KCNK18Q7Z418 384 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 GSTCDQ8NEC7 633 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 KIFAP3Q92845 792 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 B3GALT6Q96L58 329 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 ADPGKQ9BRR6 497 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 MMTAG2Q9BU76 263 aaKnown RBP13.15□□□□□ -0.3
HERC1-202ENST00000558324 RUSC1Q9BVN2 902 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 EMILIN2Q9BXX0 1053 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 MRPL17Q9NRX2 175 aaKnown RBP13.15□□□□□ -0.3
HERC1-202ENST00000558324 SNTG2Q9NY99 539 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 GDAQ9Y2T3 454 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 IRAK3Q9Y616 596 aa13.15□□□□□ -0.3
HERC1-202ENST00000558324 RECQL4O94761 1208 aa13.14□□□□□ -0.31
HERC1-202ENST00000558324 SOD2P04179 222 aa13.14□□□□□ -0.31
HERC1-202ENST00000558324 CNPP09543 421 aaKnown RBP13.14□□□□□ -0.31
HERC1-202ENST00000558324 KLRC2P26717 231 aa13.14□□□□□ -0.31
HERC1-202ENST00000558324 RAD51AP2Q09MP3 1159 aa13.14□□□□□ -0.31
HERC1-202ENST00000558324 CABP7Q86V35 215 aa13.14□□□□□ -0.31
HERC1-202ENST00000558324 FEZF2Q8TBJ5 459 aa13.14□□□□□ -0.31
HERC1-202ENST00000558324 HASPINQ8TF76 798 aa13.14□□□□□ -0.31
HERC1-202ENST00000558324 SLC22A17Q8WUG5 538 aa13.14□□□□□ -0.31
HERC1-202ENST00000558324 CDK5RAP3Q96JB5 506 aa13.14□□□□□ -0.31
HERC1-202ENST00000558324 KLHL5Q96PQ7 755 aa13.14□□□□□ -0.31
HERC1-202ENST00000558324 HERC2P3Q9BVR0 1158 aa13.14□□□□□ -0.31
HERC1-202ENST00000558324 COLEC11Q9BWP8 271 aa13.14□□□□□ -0.31
HERC1-202ENST00000558324 CXCL16Q9H2A7 254 aa13.14□□□□□ -0.31
HERC1-202ENST00000558324 ADAM7Q9H2U9 754 aa13.14□□□□□ -0.31
HERC1-202ENST00000558324 DZANK1Q9NVP4 752 aa13.14□□□□□ -0.31
HERC1-202ENST00000558324 VPS37CA5D8V6 355 aaPredicted RBP13.13□□□□□ -0.31
HERC1-202ENST00000558324 CASTOR2A6NHX0 329 aa13.13□□□□□ -0.31
HERC1-202ENST00000558324 PRR33A8MZF0 331 aa13.13□□□□□ -0.31
HERC1-202ENST00000558324 MYBP10242 640 aa13.13□□□□□ -0.31
HERC1-202ENST00000558324 NPTX2P47972 431 aa13.13□□□□□ -0.31
HERC1-202ENST00000558324 GLUD2P49448 558 aa13.13□□□□□ -0.31
HERC1-202ENST00000558324 EFNA5P52803 228 aa13.13□□□□□ -0.31
HERC1-202ENST00000558324 DMP1Q13316 513 aaPredicted RBP13.13□□□□□ -0.31
HERC1-202ENST00000558324 HERC4Q5GLZ8 1057 aaPredicted RBP13.13□□□□□ -0.31
HERC1-202ENST00000558324 NT5DC1Q5TFE4 455 aa13.13□□□□□ -0.31
HERC1-202ENST00000558324 ATF7IP2Q5U623 682 aa13.13□□□□□ -0.31
HERC1-202ENST00000558324 KIAA1841Q6NSI8 718 aa13.13□□□□□ -0.31
HERC1-202ENST00000558324 TMC5Q6UXY8 1006 aa13.13□□□□□ -0.31
HERC1-202ENST00000558324 DAW1Q8N136 415 aa13.13□□□□□ -0.31
HERC1-202ENST00000558324 PNMA5Q96PV4 448 aa13.13□□□□□ -0.31
HERC1-202ENST00000558324 PAAF1Q9BRP4 392 aa13.13□□□□□ -0.31
HERC1-202ENST00000558324 POMKQ9H5K3 350 aa13.13□□□□□ -0.31
HERC1-202ENST00000558324 STK39Q9UEW8 545 aa13.13□□□□□ -0.31
HERC1-202ENST00000558324 HCN4Q9Y3Q4 1203 aa13.13□□□□□ -0.31
HERC1-202ENST00000558324 PHLPP2Q6ZVD8 1323 aa13.13□□□□□ -0.31
HERC1-202ENST00000558324 SFI1A8K8P3 1242 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 K7ERI5 159 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 PTGESO14684 152 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 CLCN4P51793 760 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 ITIH3Q06033 890 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 MAPK7Q13164 816 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 DCAF4L1Q3SXM0 396 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 GLRA4Q5JXX5 417 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 RINT1Q6NUQ1 792 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 FUT10Q6P4F1 479 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 C1orf186Q6ZWK4 172 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 PPFIBP1Q86W92 1011 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 GLYCTKQ8IVS8 523 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 DRC1Q96MC2 740 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 FBXL18Q96ME1 805 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 RIPOR3Q96MK2 946 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 GPR62Q9BZJ7 368 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 KMT5AQ9NQR1 393 aa13.12□□□□□ -0.31
HERC1-202ENST00000558324 ADAM28Q9UKQ2 775 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms