RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 KRT83P78385 493 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 ZNF200P98182 395 aaPredicted RBP8.72□□□□□ -1.01
RTF1-205ENST00000558298 PTGDRQ13258 359 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 SLC39A14Q15043 492 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 RBBP5Q15291 538 aaKnown RBP8.72□□□□□ -1.01
RTF1-205ENST00000558298 SNCBQ16143 134 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 TMEM266Q2M3C6 531 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 TCTN1Q2MV58 587 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 NT5DC1Q5TFE4 455 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 AP1ARQ63HQ0 302 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 ANO5Q75V66 913 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 DEFB123Q8N688 67 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 TC2NQ8N9U0 490 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 RETREG2Q8NC44 543 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 LRRN4CLQ8ND94 238 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 ARMC2Q8NEN0 867 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 ERMNQ8TAM6 284 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 APBB2Q92870 758 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 KCNN1Q92952 543 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 EIF2AK1Q9BQI3 630 aaKnown RBP8.72□□□□□ -1.01
RTF1-205ENST00000558298 PBX4Q9BYU1 374 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 TSGA10Q9BZW7 698 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 MTIF3Q9H2K0 278 aaKnown RBP8.72□□□□□ -1.01
RTF1-205ENST00000558298 DHX33Q9H6R0 707 aaKnown RBP8.72□□□□□ -1.01
RTF1-205ENST00000558298 ANKEF1Q9NU02 776 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 SETD4Q9NVD3 440 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 RNF14Q9UBS8 474 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 DBR1Q9UK59 544 aaKnown RBP8.72□□□□□ -1.01
RTF1-205ENST00000558298 HPCAL4Q9UM19 191 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 SAMM50Q9Y512 469 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 ADGRG1Q9Y653 693 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 A0A1B0GTH6 734 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 POTEMA6NI47 508 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 RSPH10B2B2RC85 870 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 RBAK-RBAKDNI3L0D1 243 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 CHMP2AO43633 222 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 HSF2BPO75031 334 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 MAFO75444 373 aaPredicted RBP8.71□□□□□ -1.02
RTF1-205ENST00000558298 LUC7L3O95232 432 aaKnown RBP8.71□□□□□ -1.02
RTF1-205ENST00000558298 FGBP02675 491 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 RSPH10BP0C881 870 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 SPATA31C1P0DKV0 1188 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 DNAJB2P25686 324 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 TMOD1P28289 359 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 YWHABP31946 246 aaKnown RBP8.71□□□□□ -1.02
RTF1-205ENST00000558298 NDUFA8P51970 172 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 FOSBP53539 338 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 POU5F1BQ06416 359 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 PTPAQ15257 358 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 PCBP1Q15365 356 aaKnown RBP eCLIP8.71□□□□□ -1.02
RTF1-205ENST00000558298 E2F4Q16254 413 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 PLEKHG4Q58EX7 1191 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 IER5Q5VY09 327 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 CNKSR3Q6P9H4 555 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 CRELD2Q6UXH1 353 aaPredicted RBP8.71□□□□□ -1.02
RTF1-205ENST00000558298 OTUD6AQ7L8S5 288 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 KIAA0319LQ8IZA0 1049 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 PDILTQ8N807 584 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 EIF1ADQ8N9N8 165 aaKnown RBP8.71□□□□□ -1.02
RTF1-205ENST00000558298 PHOSPHO2Q8TCD6 241 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 GJA10Q969M2 543 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 SH3GL2Q99962 352 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 NFKBIZQ9BYH8 718 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 CYP26B1Q9NR63 512 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 WRAP73Q9P2S5 460 aaPredicted RBP8.71□□□□□ -1.02
RTF1-205ENST00000558298 HPSEQ9Y251 543 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 STXBP5LQ9Y2K9 1186 aa8.71□□□□□ -1.02
RTF1-205ENST00000558298 RALGAPA2Q2PPJ7 1873 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 PRUNE2Q8WUY3 3088 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 COL4A4P53420 1690 aaPredicted RBP8.7□□□□□ -1.02
RTF1-205ENST00000558298 ABHD14A-ACY1A0A1B0GW23 586 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 CCDC189A1A4V9 331 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 GRXCR1A8MXD5 290 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 KRT86O43790 486 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 MARCH6O60337 910 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 DGAT1O75907 488 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 ACTN1P12814 892 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 PFKFB1P16118 471 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 PRLRP16471 622 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 ZNF18P17022 549 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 KLRC1P26715 233 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 LONP1P36776 959 aaKnown RBP8.7□□□□□ -1.02
RTF1-205ENST00000558298 PBX2P40425 430 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 TXKP42681 527 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 CCT5P48643 541 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 RARRES1P49788 294 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 LIG3P49916 1009 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 SH3BGRP55822 239 aaPredicted RBP8.7□□□□□ -1.02
RTF1-205ENST00000558298 RWDD2BP57060 319 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 VSNL1P62760 191 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 MRPS6P82932 125 aaKnown RBP8.7□□□□□ -1.02
RTF1-205ENST00000558298 ZNF174Q15697 407 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 CCDC40Q4G0X9 1142 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 ZNF569Q5MCW4 686 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 ODR4Q5SWX8 454 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 ZNF618Q5T7W0 954 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 NCAPH2Q6IBW4 605 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 FAM173BQ6P4H8 233 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 DTHD1Q6ZMT9 781 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 TSHZ1Q6ZSZ6 1077 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms