RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SPIRE2Q8WWL2 714 aa11.4□□□□□ -0.58
TPM1-210ENST00000558264 PCYT2Q99447 389 aa11.4□□□□□ -0.58
TPM1-210ENST00000558264 HAPLN2Q9GZV7 340 aa11.4□□□□□ -0.58
TPM1-210ENST00000558264 ASCC2Q9H1I8 757 aaPredicted RBP11.4□□□□□ -0.58
TPM1-210ENST00000558264 ADARB2Q9NS39 739 aaKnown RBP11.4□□□□□ -0.58
TPM1-210ENST00000558264 CTTNBP2NLQ9P2B4 639 aa11.4□□□□□ -0.58
TPM1-210ENST00000558264 PTPRJQ12913 1337 aa11.4□□□□□ -0.58
TPM1-210ENST00000558264 TTLL13PA6NNM8 815 aa11.4□□□□□ -0.59
TPM1-210ENST00000558264 ARIH2O95376 493 aa11.4□□□□□ -0.59
TPM1-210ENST00000558264 GGPS1O95749 300 aa11.4□□□□□ -0.59
TPM1-210ENST00000558264 CCDC172P0C7W6 258 aa11.4□□□□□ -0.59
TPM1-210ENST00000558264 GLRA2P23416 452 aa11.4□□□□□ -0.59
TPM1-210ENST00000558264 LLGL1Q15334 1064 aa11.4□□□□□ -0.59
TPM1-210ENST00000558264 DDX42Q86XP3 938 aaKnown RBP eCLIP11.4□□□□□ -0.59
TPM1-210ENST00000558264 HELQQ8TDG4 1101 aa11.4□□□□□ -0.59
TPM1-210ENST00000558264 ZNF516Q92618 1163 aa11.4□□□□□ -0.59
TPM1-210ENST00000558264 NTPCRQ9BSD7 190 aaKnown RBP11.4□□□□□ -0.59
TPM1-210ENST00000558264 TARS2Q9BW92 718 aaKnown RBP11.4□□□□□ -0.59
TPM1-210ENST00000558264 RAB20Q9NX57 234 aa11.4□□□□□ -0.59
TPM1-210ENST00000558264 ADAM21Q9UKJ8 722 aa11.4□□□□□ -0.59
TPM1-210ENST00000558264 STXBP5LQ9Y2K9 1186 aa11.4□□□□□ -0.59
TPM1-210ENST00000558264 NR2E1Q9Y466 385 aa11.4□□□□□ -0.59
TPM1-210ENST00000558264 ZC3H4Q9UPT8 1303 aaKnown RBP11.39□□□□□ -0.59
TPM1-210ENST00000558264 GSTTP1A0A1W2PQM5 241 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 FARP2O94887 1054 aaPredicted RBP11.39□□□□□ -0.59
TPM1-210ENST00000558264 SYF2O95926 243 aaKnown RBP11.39□□□□□ -0.59
TPM1-210ENST00000558264 MARCKSL1P49006 195 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 Q3C1V9 767 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 C2CD6Q53TS8 623 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 DCAF12L1Q5VU92 463 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 FBXL13Q8NEE6 735 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 TMEM8AQ9HCN3 771 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 ARHGAP28Q9P2N2 729 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 AMFRQ9UKV5 643 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 ARID2Q68CP9 1835 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 KRIT1O00522 736 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 DKC1O60832 514 aaKnown RBP eCLIP11.39□□□□□ -0.59
TPM1-210ENST00000558264 RNF40O75150 1001 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 ZBTB48P10074 688 aaPredicted RBP11.39□□□□□ -0.59
TPM1-210ENST00000558264 TNNI1P19237 187 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 ANXA13P27216 316 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 TCF7P36402 384 aaPredicted RBP11.39□□□□□ -0.59
TPM1-210ENST00000558264 LMAN1P49257 510 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 SLFN11Q7Z7L1 901 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 RIOX2Q8IUF8 465 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 DNERQ8NFT8 737 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 DEPTORQ8TB45 409 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 CASKIN2Q8WXE0 1202 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 SLC7A3Q8WY07 619 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 NT5C1BQ96P26 610 aa11.39□□□□□ -0.59
TPM1-210ENST00000558264 NOCTQ9UK39 431 aaKnown RBP11.39□□□□□ -0.59
TPM1-210ENST00000558264 MAFBQ9Y5Q3 323 aaPredicted RBP11.39□□□□□ -0.59
TPM1-210ENST00000558264 MYH9P35579 1960 aaKnown RBP11.39□□□□□ -0.59
TPM1-210ENST00000558264 NCANO14594 1321 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 A0A0A6YYK5 440 aaPredicted RBP11.38□□□□□ -0.59
TPM1-210ENST00000558264 ANKRD62A6NC57 917 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 AGPSO00116 658 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 PGRMC1O00264 195 aaKnown RBP11.38□□□□□ -0.59
TPM1-210ENST00000558264 P4HA2O15460 535 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 ECM2O94769 699 aaPredicted RBP11.38□□□□□ -0.59
TPM1-210ENST00000558264 FGGP02679 453 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 YBX3P16989 372 aaKnown RBP eCLIP11.38□□□□□ -0.59
TPM1-210ENST00000558264 MFAP3P55082 362 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 STRN3Q13033 797 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 BIRC3Q13489 604 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 MESDQ14696 234 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 FBXO16Q8IX29 292 aaPredicted RBP11.38□□□□□ -0.59
TPM1-210ENST00000558264 FAM71AQ8IYT1 594 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 LRRC71Q8N4P6 559 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 LMBR1Q8WVP7 490 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 COPS5Q92905 334 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 MFSD14AQ96MC6 490 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 CELF4Q9BZC1 486 aaKnown RBP11.38□□□□□ -0.59
TPM1-210ENST00000558264 FBXO40Q9UH90 709 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 AMACRQ9UHK6 382 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 PRDM4Q9UKN5 801 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 INTUQ9ULD6 942 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 MYPNQ86TC9 1320 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 ZNF233A6NK53 670 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 K7ERI5 159 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 CNMDO75829 334 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 STAM2O75886 525 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 GJB1P08034 283 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 CYP11B1P15538 503 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 RFX1P22670 979 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 IREB2P48200 963 aaKnown RBP11.38□□□□□ -0.59
TPM1-210ENST00000558264 FMO1Q01740 532 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 PPATQ06203 517 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 MKRN3Q13064 507 aaKnown RBP11.38□□□□□ -0.59
TPM1-210ENST00000558264 HSDL1Q3SXM5 330 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 EAPPQ56P03 285 aaPredicted RBP11.38□□□□□ -0.59
TPM1-210ENST00000558264 BRDTQ58F21 947 aaPredicted RBP11.38□□□□□ -0.59
TPM1-210ENST00000558264 C9orf131Q5VYM1 1079 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 LLGL2Q6P1M3 1020 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 ZBTB33Q86T24 672 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 SLC17A8Q8NDX2 589 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 TRAPPC12Q8WVT3 735 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 ALG3Q92685 438 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 KRT35Q92764 455 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 GLG1Q92896 1179 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms