RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 KCNT2Q6UVM3 1135 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 AGMOQ6ZNB7 445 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 STXBP4Q6ZWJ1 553 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 HAUS6Q7Z4H7 955 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 SFR1Q86XK3 245 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 SYCP3Q8IZU3 236 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 SMG8Q8ND04 991 aaKnown RBP9.85□□□□□ -0.83
SPG11-207ENST00000558138 LRRC15Q8TF66 581 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 NOC3LQ8WTT2 800 aaKnown RBP9.85□□□□□ -0.83
SPG11-207ENST00000558138 POF1BQ8WVV4 589 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 TMEM169Q96HH4 297 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 CCDC34Q96HJ3 373 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 TNMDQ9H2S6 317 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 MAGEF1Q9HAY2 307 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 ENTPD7Q9NQZ7 604 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 RNF19AQ9NV58 838 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 PANK4Q9NVE7 773 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 TBC1D13Q9NVG8 400 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 SPG21Q9NZD8 308 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 ARHGAP28Q9P2N2 729 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 TNFSF13BQ9Y275 285 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 GIT1Q9Y2X7 761 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 MTCH2Q9Y6C9 303 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 A0A1B0GVL5 298 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 CARNS1A5YM72 827 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 ARL5CA6NH57 179 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 TTLL13PA6NNM8 815 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 C5orf67F2Z3F1 127 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 GRM6O15303 877 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 CLDN3O15551 220 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 FGF18O76093 207 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 RECQL4O94761 1208 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 ITGB1P05556 798 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 MAPTP10636 758 aaKnown RBP9.84□□□□□ -0.83
SPG11-207ENST00000558138 PFKFB1P16118 471 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 SCP2P22307 547 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 NMT1P30419 496 aaKnown RBP9.84□□□□□ -0.83
SPG11-207ENST00000558138 SYKP43405 635 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 NCKAP1LP55160 1127 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 BCAR1P56945 870 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 NOLC1Q14978 699 aaKnown RBP eCLIP9.84□□□□□ -0.83
SPG11-207ENST00000558138 AXDND1Q5T1B0 1012 aaPredicted RBP9.84□□□□□ -0.83
SPG11-207ENST00000558138 NT5DC1Q5TFE4 455 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 EEF1DP3Q658K8 133 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 MPZL3Q6UWV2 235 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 LRRC55Q6ZSA7 311 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 MRPL10Q7Z7H8 261 aaKnown RBP9.84□□□□□ -0.83
SPG11-207ENST00000558138 CRIPAKQ8N1N5 446 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 FSIP1Q8NA03 581 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 TMEM161BQ8NDZ6 487 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 P2RX5Q93086 422 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 MRPL38Q96DV4 380 aaKnown RBP9.84□□□□□ -0.83
SPG11-207ENST00000558138 ZFP42Q96MM3 310 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 ACO2Q99798 780 aaKnown RBP9.84□□□□□ -0.83
SPG11-207ENST00000558138 LMAN2LQ9H0V9 348 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 RNF39Q9H2S5 420 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 CWH43Q9H720 699 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 TOPORSQ9NS56 1045 aaPredicted RBP9.84□□□□□ -0.83
SPG11-207ENST00000558138 LMCD1Q9NZU5 365 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 SEL1LQ9UBV2 794 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 TBX20Q9UMR3 447 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 PLAGL2Q9UPG8 496 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 EXOC7Q9UPT5 735 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 FAN1Q9Y2M0 1017 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 PRG3Q9Y2Y8 225 aaPredicted RBP9.84□□□□□ -0.83
SPG11-207ENST00000558138 SZT2Q5T011 3432 aa9.84□□□□□ -0.83
SPG11-207ENST00000558138 TOM1L1O75674 476 aa9.83□□□□□ -0.84
SPG11-207ENST00000558138 EDN1P05305 212 aa9.83□□□□□ -0.84
SPG11-207ENST00000558138 MCF2P10911 925 aa9.83□□□□□ -0.84
SPG11-207ENST00000558138 ZNF131P52739 623 aa9.83□□□□□ -0.84
SPG11-207ENST00000558138 GRIK3Q13003 919 aa9.83□□□□□ -0.84
SPG11-207ENST00000558138 PLPP4Q5VZY2 271 aa9.83□□□□□ -0.84
SPG11-207ENST00000558138 ADALQ6DHV7 355 aa9.83□□□□□ -0.84
SPG11-207ENST00000558138 TMC7Q7Z402 723 aa9.83□□□□□ -0.84
SPG11-207ENST00000558138 MRPS27Q92552 414 aaKnown RBP9.83□□□□□ -0.84
SPG11-207ENST00000558138 CCDC47Q96A33 483 aaKnown RBP9.83□□□□□ -0.84
SPG11-207ENST00000558138 FAM212AQ96EL1 285 aa9.83□□□□□ -0.84
SPG11-207ENST00000558138 ACAP3Q96P50 834 aa9.83□□□□□ -0.84
SPG11-207ENST00000558138 TCF25Q9BQ70 676 aa9.83□□□□□ -0.84
SPG11-207ENST00000558138 NTPCRQ9BSD7 190 aaKnown RBP9.83□□□□□ -0.84
SPG11-207ENST00000558138 CDT1Q9H211 546 aa9.83□□□□□ -0.84
SPG11-207ENST00000558138 BLZF1Q9H2G9 400 aa9.83□□□□□ -0.84
SPG11-207ENST00000558138 NSUN3Q9H649 340 aaKnown RBP9.83□□□□□ -0.84
SPG11-207ENST00000558138 IGFLR1Q9H665 355 aa9.83□□□□□ -0.84
SPG11-207ENST00000558138 NRDE2Q9H7Z3 1164 aa9.83□□□□□ -0.84
SPG11-207ENST00000558138 TLR9Q9NR96 1032 aa9.83□□□□□ -0.84
SPG11-207ENST00000558138 SERTAD1Q9UHV2 236 aa9.83□□□□□ -0.84
SPG11-207ENST00000558138 CIZ1Q9ULV3 898 aaPredicted RBP9.83□□□□□ -0.84
SPG11-207ENST00000558138 CASTOR2A6NHX0 329 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 SPDYE4A6NLX3 237 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 ALDH2P05091 517 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 THP07101 528 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 CMA1P23946 247 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 SLC11A1P49279 550 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 UBE3AQ05086 875 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 COASYQ13057 564 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 ALCAMQ13740 583 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 E2F4Q16254 413 aa9.82□□□□□ -0.84
SPG11-207ENST00000558138 ZC2HC1CQ53FD0 456 aaPredicted RBP9.82□□□□□ -0.84
SPG11-207ENST00000558138 TCEAL5Q5H9L2 206 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms