RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 GDI1P31150 447 aa10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 SOX9P48436 509 aa10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 GPC3P51654 580 aa10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 PABPC1LQ4VXU2 614 aaKnown RBP10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 EFCAB12Q6NXP0 572 aa10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 PKN3Q6P5Z2 889 aa10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 MAP4K3Q8IVH8 894 aa10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 CKAP2LQ8IYA6 745 aa10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 ABCA7Q8IZY2 2146 aa10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 ZNF843Q8N446 348 aa10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 RSPH1Q8WYR4 309 aa10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 CUL5Q93034 780 aa10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 ELSPBP1Q96BH3 223 aa10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 UBL7Q96S82 380 aaPredicted RBP10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 MAP7D2Q96T17 732 aa10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 SDF4Q9BRK5 362 aa10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 TRMT61BQ9BVS5 477 aaKnown RBP10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 GPR62Q9BZJ7 368 aa10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 DUSP15Q9H1R2 295 aaPredicted RBP10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 SCUBE2Q9NQ36 999 aa10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 CHST7Q9NS84 486 aa10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 MRPS23Q9Y3D9 190 aaKnown RBP10.92□□□□□ -0.66
IGKV2D-28-202ENST00000558026 TEP1Q99973 2627 aaKnown RBP10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 BCLAF3A2AJT9 711 aaKnown RBP10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 DCLK1O15075 740 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 PCP11498 1178 aaKnown RBP10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 CEBPBP17676 345 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 FAM193AP78312 1265 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 TRAF1Q13077 416 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 LRRC32Q14392 662 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 LIN9Q5TKA1 542 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 FAM160B1Q5W0V3 765 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 ABHD15Q6UXT9 468 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 COLGALT2Q8IYK4 626 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 LINC01465Q8N7H1 131 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 PI4K2BQ8TCG2 481 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 NLRP7Q8WX94 980 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 IRF7Q92985 503 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 FAM227BQ96M60 508 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 TRAIPQ9BWF2 469 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 RNF41Q9H4P4 317 aaPredicted RBP10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 ZNF302Q9NR11 478 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 CHST12Q9NRB3 414 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 POLR3BQ9NW08 1133 aaPredicted RBP10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 ZSWIM5Q9P217 1185 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 FNIP2Q9P278 1114 aa10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 PIN4Q9Y237 131 aaKnown RBP10.91□□□□□ -0.66
IGKV2D-28-202ENST00000558026 NCANO14594 1321 aa10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 NFASCO94856 1347 aa10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 PIK3CDO00329 1044 aa10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 XYLBO75191 536 aa10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 C1RP00736 705 aa10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 IRX4P78413 519 aa10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 UBE2SQ16763 222 aa10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 CCDC178Q5BJE1 867 aa10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 FAM78AQ5JUQ0 283 aa10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 SWSAP1Q6NVH7 229 aa10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 TXNDC11Q6PKC3 985 aa10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 VITQ6UXI7 678 aa10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 RAB44Q7Z6P3 723 aaPredicted RBP10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 ZNF589Q86UQ0 364 aaPredicted RBP10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 SLC7A14Q8TBB6 771 aa10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 RABGGTAQ92696 567 aa10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 GDE1Q9NZC3 331 aa10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 KCNH3Q9ULD8 1083 aa10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 PCDHB2Q9Y5E7 798 aa10.9□□□□□ -0.66
IGKV2D-28-202ENST00000558026 PTPN13Q12923 2485 aa10.9□□□□□ -0.67
IGKV2D-28-202ENST00000558026 ZMYM6O95789 1325 aa10.89□□□□□ -0.67
IGKV2D-28-202ENST00000558026 A0A0D9SFI3 127 aa10.89□□□□□ -0.67
IGKV2D-28-202ENST00000558026 SLC38A8A6NNN8 435 aa10.89□□□□□ -0.67
IGKV2D-28-202ENST00000558026 TK2O00142 265 aa10.89□□□□□ -0.67
IGKV2D-28-202ENST00000558026 KHNYNO15037 678 aaKnown RBP10.89□□□□□ -0.67
IGKV2D-28-202ENST00000558026 MAFGO15525 162 aa10.89□□□□□ -0.67
IGKV2D-28-202ENST00000558026 ADAM12O43184 909 aa10.89□□□□□ -0.67
IGKV2D-28-202ENST00000558026 ZNF623O75123 536 aa10.89□□□□□ -0.67
IGKV2D-28-202ENST00000558026 SKIP12755 728 aa10.89□□□□□ -0.67
IGKV2D-28-202ENST00000558026 SRSF1Q07955 248 aaKnown RBP eCLIP10.89□□□□□ -0.67
IGKV2D-28-202ENST00000558026 DRP2Q13474 957 aa10.89□□□□□ -0.67
IGKV2D-28-202ENST00000558026 IFIT1BQ5T764 474 aaKnown RBP10.89□□□□□ -0.67
IGKV2D-28-202ENST00000558026 OTUD7AQ8TE49 926 aaPredicted RBP10.89□□□□□ -0.67
IGKV2D-28-202ENST00000558026 SLC32A1Q9H598 525 aa10.89□□□□□ -0.67
IGKV2D-28-202ENST00000558026 RSAD1Q9HA92 442 aa10.89□□□□□ -0.67
IGKV2D-28-202ENST00000558026 ZFP14Q9HCL3 533 aa10.89□□□□□ -0.67
IGKV2D-28-202ENST00000558026 ZBTB40Q9NUA8 1239 aa10.89□□□□□ -0.67
IGKV2D-28-202ENST00000558026 THADAQ6YHU6 1953 aa10.88□□□□□ -0.67
IGKV2D-28-202ENST00000558026 TDRD15B5MCY1 1934 aaKnown RBP10.88□□□□□ -0.67
IGKV2D-28-202ENST00000558026 ATXN7O15265 892 aaPredicted RBP10.88□□□□□ -0.67
IGKV2D-28-202ENST00000558026 MEFVO15553 781 aaPredicted RBP10.88□□□□□ -0.67
IGKV2D-28-202ENST00000558026 RHOP08100 348 aa10.88□□□□□ -0.67
IGKV2D-28-202ENST00000558026 HOXA9P31269 272 aa10.88□□□□□ -0.67
IGKV2D-28-202ENST00000558026 MAPK8P45983 427 aa10.88□□□□□ -0.67
IGKV2D-28-202ENST00000558026 GRM4Q14833 912 aa10.88□□□□□ -0.67
IGKV2D-28-202ENST00000558026 ELF2Q15723 593 aa10.88□□□□□ -0.67
IGKV2D-28-202ENST00000558026 USP41Q3LFD5 358 aa10.88□□□□□ -0.67
IGKV2D-28-202ENST00000558026 RTP2Q5QGT7 225 aa10.88□□□□□ -0.67
IGKV2D-28-202ENST00000558026 FUT10Q6P4F1 479 aa10.88□□□□□ -0.67
IGKV2D-28-202ENST00000558026 PIP4P1Q86T03 277 aa10.88□□□□□ -0.67
IGKV2D-28-202ENST00000558026 TTC8Q8TAM2 541 aa10.88□□□□□ -0.67
IGKV2D-28-202ENST00000558026 TCEAL4Q96EI5 215 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms