RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 PPM1LQ5SGD2 360 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 LIN9Q5TKA1 542 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 PDXDC2PQ6P474 469 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 TRMT1LQ7Z2T5 733 aaKnown RBP10.68□□□□□ -0.7
NEDD1-211ENST00000557454 CCDC60Q8IWA6 550 aaPredicted RBP10.68□□□□□ -0.7
NEDD1-211ENST00000557454 LRRC71Q8N4P6 559 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 PIBF1Q8WXW3 757 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 ELSPBP1Q96BH3 223 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 MBOAT7Q96N66 472 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 UBL7Q96S82 380 aaPredicted RBP10.68□□□□□ -0.7
NEDD1-211ENST00000557454 SDF4Q9BRK5 362 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 CCDC86Q9H6F5 360 aaKnown RBP10.68□□□□□ -0.7
NEDD1-211ENST00000557454 RIOX1Q9H6W3 641 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 SCUBE2Q9NQ36 999 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 FAM105AQ9NUU6 356 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 EVPLQ92817 2033 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 PIEZO2Q9H5I5 2752 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 ZMYM6O95789 1325 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 IGKV6D-21A0A0A0MT36 114 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 PALM3A6NDB9 673 aaPredicted RBP10.67□□□□□ -0.7
NEDD1-211ENST00000557454 B4E1Z4 1266 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 J3QKU1 62 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 CYTH3O43739 400 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 XYLBO75191 536 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 ATG7O95352 703 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 CCNE2O96020 404 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 POMCP01189 267 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 C8AP07357 584 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 ATP4AP20648 1035 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 FCARP24071 287 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 OR1G1P47890 313 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 GPC3P51654 580 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 ITGB3BPQ13352 177 aaPredicted RBP10.67□□□□□ -0.7
NEDD1-211ENST00000557454 PABPC1LQ4VXU2 614 aaKnown RBP10.67□□□□□ -0.7
NEDD1-211ENST00000557454 FAM160B1Q5W0V3 765 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 LINC01465Q8N7H1 131 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 MDM1Q8TC05 714 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 MS4A3Q96HJ5 214 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 TRAIPQ9BWF2 469 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 ZNF334Q9HCZ1 680 aaPredicted RBP10.67□□□□□ -0.7
NEDD1-211ENST00000557454 CHST12Q9NRB3 414 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.67□□□□□ -0.7
NEDD1-211ENST00000557454 KCNH7Q9NS40 1196 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 CHST7Q9NS84 486 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 FNIP2Q9P278 1114 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 KCNH3Q9ULD8 1083 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 PIN4Q9Y237 131 aaKnown RBP10.67□□□□□ -0.7
NEDD1-211ENST00000557454 MRPS23Q9Y3D9 190 aaKnown RBP10.67□□□□□ -0.7
NEDD1-211ENST00000557454 PTPN13Q12923 2485 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 COL4A2P08572 1712 aa10.67□□□□□ -0.7
NEDD1-211ENST00000557454 NFASCO94856 1347 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 DDX39AO00148 427 aaKnown RBP10.66□□□□□ -0.7
NEDD1-211ENST00000557454 PIK3CDO00329 1044 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 NRG2O14511 850 aaPredicted RBP10.66□□□□□ -0.7
NEDD1-211ENST00000557454 MAFGO15525 162 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 EXTL3O43909 919 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 SKIP12755 728 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 CEBPBP17676 345 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 GDI1P31150 447 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 SLC5A9Q2M3M2 681 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 EFCAB12Q6NXP0 572 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 AGMOQ6ZNB7 445 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 MAP4K3Q8IVH8 894 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 CKAP2LQ8IYA6 745 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 PI4K2BQ8TCG2 481 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 NLRP7Q8WX94 980 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 IRF7Q92985 503 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 ZC3H10Q96K80 434 aaKnown RBP10.66□□□□□ -0.7
NEDD1-211ENST00000557454 TRMT61BQ9BVS5 477 aaKnown RBP10.66□□□□□ -0.7
NEDD1-211ENST00000557454 SLC32A1Q9H598 525 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 ZNF302Q9NR11 478 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 GDE1Q9NZC3 331 aa10.66□□□□□ -0.7
NEDD1-211ENST00000557454 DNMT3BQ9UBC3 853 aaKnown RBP10.66□□□□□ -0.7
NEDD1-211ENST00000557454 ASCC3Q8N3C0 2202 aaKnown RBP10.66□□□□□ -0.7
NEDD1-211ENST00000557454 BAZ2BQ9UIF8 2168 aaKnown RBP10.66□□□□□ -0.7
NEDD1-211ENST00000557454 BCLAF3A2AJT9 711 aaKnown RBP10.65□□□□□ -0.7
NEDD1-211ENST00000557454 H0Y626 953 aa10.65□□□□□ -0.7
NEDD1-211ENST00000557454 TK2O00142 265 aa10.65□□□□□ -0.7
NEDD1-211ENST00000557454 TRIM16O95361 564 aa10.65□□□□□ -0.7
NEDD1-211ENST00000557454 HOXA9P31269 272 aa10.65□□□□□ -0.7
NEDD1-211ENST00000557454 RAB27AP51159 221 aa10.65□□□□□ -0.7
NEDD1-211ENST00000557454 IFIT1BQ5T764 474 aaKnown RBP10.65□□□□□ -0.7
NEDD1-211ENST00000557454 PRSS55Q6UWB4 352 aaPredicted RBP10.65□□□□□ -0.7
NEDD1-211ENST00000557454 ABHD15Q6UXT9 468 aa10.65□□□□□ -0.7
NEDD1-211ENST00000557454 COLGALT2Q8IYK4 626 aa10.65□□□□□ -0.7
NEDD1-211ENST00000557454 ZNF843Q8N446 348 aa10.65□□□□□ -0.7
NEDD1-211ENST00000557454 EFCAB3Q8N7B9 438 aa10.65□□□□□ -0.7
NEDD1-211ENST00000557454 SLC7A14Q8TBB6 771 aa10.65□□□□□ -0.7
NEDD1-211ENST00000557454 DUSP15Q9H1R2 295 aaPredicted RBP10.65□□□□□ -0.7
NEDD1-211ENST00000557454 RSAD1Q9HA92 442 aa10.65□□□□□ -0.7
NEDD1-211ENST00000557454 TRPV5Q9NQA5 729 aa10.65□□□□□ -0.7
NEDD1-211ENST00000557454 TEP1Q99973 2627 aaKnown RBP10.65□□□□□ -0.71
NEDD1-211ENST00000557454 MTCL1Q9Y4B5 1905 aaKnown RBP10.64□□□□□ -0.71
NEDD1-211ENST00000557454 URB1O60287 2271 aaKnown RBP10.64□□□□□ -0.71
NEDD1-211ENST00000557454 A0A0D9SFI3 127 aa10.64□□□□□ -0.71
NEDD1-211ENST00000557454 PATE3B3GLJ2 98 aa10.64□□□□□ -0.71
NEDD1-211ENST00000557454 KHNYNO15037 678 aaKnown RBP10.64□□□□□ -0.71
NEDD1-211ENST00000557454 ZNF623O75123 536 aa10.64□□□□□ -0.71
NEDD1-211ENST00000557454 AKAP3O75969 853 aa10.64□□□□□ -0.71
NEDD1-211ENST00000557454 TMOD1P28289 359 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms