RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 NEMP1O14524 444 aa6□□□□□ -1.45
VRK1-207ENST00000557352 ITGA10O75578 1167 aa6□□□□□ -1.45
VRK1-207ENST00000557352 GCP02774 474 aa6□□□□□ -1.45
VRK1-207ENST00000557352 LAG3P18627 525 aa6□□□□□ -1.45
VRK1-207ENST00000557352 PROZP22891 400 aa6□□□□□ -1.45
VRK1-207ENST00000557352 CTSSP25774 331 aa6□□□□□ -1.45
VRK1-207ENST00000557352 UGT8Q16880 541 aa6□□□□□ -1.45
VRK1-207ENST00000557352 ANKS6Q68DC2 871 aa6□□□□□ -1.45
VRK1-207ENST00000557352 RNF180Q86T96 592 aa6□□□□□ -1.45
VRK1-207ENST00000557352 NOP9Q86U38 636 aaKnown RBP6□□□□□ -1.45
VRK1-207ENST00000557352 CLRN3Q8NCR9 226 aa6□□□□□ -1.45
VRK1-207ENST00000557352 MYEOVQ96EZ4 313 aa6□□□□□ -1.45
VRK1-207ENST00000557352 DCLRE1CQ96SD1 692 aaKnown RBP6□□□□□ -1.45
VRK1-207ENST00000557352 SPON1Q9HCB6 807 aa6□□□□□ -1.45
VRK1-207ENST00000557352 GPRC5DQ9NZD1 345 aa6□□□□□ -1.45
VRK1-207ENST00000557352 TRPM5Q9NZQ8 1165 aa6□□□□□ -1.45
VRK1-207ENST00000557352 COL4A3Q01955 1670 aa5.99□□□□□ -1.45
VRK1-207ENST00000557352 ZEB2O60315 1214 aa5.99□□□□□ -1.45
VRK1-207ENST00000557352 FSCN1Q16658 493 aaKnown RBP5.99□□□□□ -1.45
VRK1-207ENST00000557352 DRICH1Q6PGQ1 229 aaPredicted RBP5.99□□□□□ -1.45
VRK1-207ENST00000557352 BTNL9Q6UXG8 535 aa5.99□□□□□ -1.45
VRK1-207ENST00000557352 DDX46Q7L014 1031 aaKnown RBP5.99□□□□□ -1.45
VRK1-207ENST00000557352 GDF7Q7Z4P5 450 aa5.99□□□□□ -1.45
VRK1-207ENST00000557352 HDGFL2Q7Z4V5 671 aaPredicted RBP5.99□□□□□ -1.45
VRK1-207ENST00000557352 THNSL2Q86YJ6 484 aa5.99□□□□□ -1.45
VRK1-207ENST00000557352 SYT12Q8IV01 421 aa5.99□□□□□ -1.45
VRK1-207ENST00000557352 DNAJC10Q8IXB1 793 aa5.99□□□□□ -1.45
VRK1-207ENST00000557352 MDM1Q8TC05 714 aa5.99□□□□□ -1.45
VRK1-207ENST00000557352 TTC1Q99614 292 aa5.99□□□□□ -1.45
VRK1-207ENST00000557352 EDARQ9UNE0 448 aa5.99□□□□□ -1.45
VRK1-207ENST00000557352 CHST2Q9Y4C5 530 aa5.99□□□□□ -1.45
VRK1-207ENST00000557352 CENPVL1A0A0U1RR11 272 aa5.98□□□□□ -1.45
VRK1-207ENST00000557352 GRID2IPA4D2P6 1211 aa5.98□□□□□ -1.45
VRK1-207ENST00000557352 TBKBP1A7MCY6 615 aa5.98□□□□□ -1.45
VRK1-207ENST00000557352 B5MCH6 92 aa5.98□□□□□ -1.45
VRK1-207ENST00000557352 LPXNO60711 386 aa5.98□□□□□ -1.45
VRK1-207ENST00000557352 ULK1O75385 1050 aa5.98□□□□□ -1.45
VRK1-207ENST00000557352 GASTP01350 101 aa5.98□□□□□ -1.45
VRK1-207ENST00000557352 SESN3P58005 492 aa5.98□□□□□ -1.45
VRK1-207ENST00000557352 NHLH2Q02577 135 aa5.98□□□□□ -1.45
VRK1-207ENST00000557352 OR10H5Q8NGA6 315 aa5.98□□□□□ -1.45
VRK1-207ENST00000557352 GPR150Q8NGU9 434 aa5.98□□□□□ -1.45
VRK1-207ENST00000557352 CEP95Q96GE4 821 aa5.98□□□□□ -1.45
VRK1-207ENST00000557352 PAWRQ96IZ0 340 aaKnown RBP5.98□□□□□ -1.45
VRK1-207ENST00000557352 AKIP1Q9NQ31 210 aa5.98□□□□□ -1.45
VRK1-207ENST00000557352 PACSIN3Q9UKS6 424 aa5.98□□□□□ -1.45
VRK1-207ENST00000557352 TMEM200CA6NKL6 621 aa5.97□□□□□ -1.45
VRK1-207ENST00000557352 RNASET2O00584 256 aaKnown RBP5.97□□□□□ -1.45
VRK1-207ENST00000557352 NCR1O76036 304 aa5.97□□□□□ -1.45
VRK1-207ENST00000557352 RHOBTB3O94955 611 aa5.97□□□□□ -1.45
VRK1-207ENST00000557352 ZSCAN20P17040 1043 aaPredicted RBP5.97□□□□□ -1.45
VRK1-207ENST00000557352 ENPP1P22413 925 aa5.97□□□□□ -1.45
VRK1-207ENST00000557352 CANXP27824 592 aaKnown RBP5.97□□□□□ -1.45
VRK1-207ENST00000557352 RNASE9P60153 205 aaKnown RBP5.97□□□□□ -1.45
VRK1-207ENST00000557352 STRN3Q13033 797 aa5.97□□□□□ -1.45
VRK1-207ENST00000557352 EFCAB12Q6NXP0 572 aa5.97□□□□□ -1.45
VRK1-207ENST00000557352 STRA8Q7Z7C7 330 aa5.97□□□□□ -1.45
VRK1-207ENST00000557352 NPM2Q86SE8 214 aaKnown RBP5.97□□□□□ -1.45
VRK1-207ENST00000557352 UBR7Q8N806 425 aa5.97□□□□□ -1.45
VRK1-207ENST00000557352 ACAP3Q96P50 834 aa5.97□□□□□ -1.45
VRK1-207ENST00000557352 DPP7Q9UHL4 492 aa5.97□□□□□ -1.45
VRK1-207ENST00000557352 NISCHQ9Y2I1 1504 aa5.97□□□□□ -1.45
VRK1-207ENST00000557352 RPTORQ8N122 1335 aa5.97□□□□□ -1.45
VRK1-207ENST00000557352 PCSK5Q92824 1860 aa5.96□□□□□ -1.45
VRK1-207ENST00000557352 GAGE12BA1L429 117 aa5.96□□□□□ -1.46
VRK1-207ENST00000557352 GAGE12HA6NDE8 117 aa5.96□□□□□ -1.46
VRK1-207ENST00000557352 DIRC3C9JPN6 131 aa5.96□□□□□ -1.46
VRK1-207ENST00000557352 B3GALT2O43825 422 aa5.96□□□□□ -1.46
VRK1-207ENST00000557352 BMP5P22003 454 aa5.96□□□□□ -1.46
VRK1-207ENST00000557352 CRHR1P34998 444 aa5.96□□□□□ -1.46
VRK1-207ENST00000557352 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.96□□□□□ -1.46
VRK1-207ENST00000557352 BMT2Q1RMZ1 405 aa5.96□□□□□ -1.46
VRK1-207ENST00000557352 TAF7LQ5H9L4 462 aa5.96□□□□□ -1.46
VRK1-207ENST00000557352 MFSD14BQ5SR56 506 aa5.96□□□□□ -1.46
VRK1-207ENST00000557352 PRAMEF14Q5SWL7 426 aa5.96□□□□□ -1.46
VRK1-207ENST00000557352 PDZD4Q76G19 769 aaPredicted RBP5.96□□□□□ -1.46
VRK1-207ENST00000557352 ZNF480Q8WV37 535 aa5.96□□□□□ -1.46
VRK1-207ENST00000557352 RAX2Q96IS3 184 aa5.96□□□□□ -1.46
VRK1-207ENST00000557352 CRAMP1Q96RY5 1269 aa5.96□□□□□ -1.46
VRK1-207ENST00000557352 TEX101Q9BY14 249 aa5.96□□□□□ -1.46
VRK1-207ENST00000557352 POGKQ9P215 609 aa5.96□□□□□ -1.46
VRK1-207ENST00000557352 DKK2Q9UBU2 259 aa5.96□□□□□ -1.46
VRK1-207ENST00000557352 APOBEC2Q9Y235 224 aaKnown RBP5.96□□□□□ -1.46
VRK1-207ENST00000557352 ZNF185O15231 689 aa5.95□□□□□ -1.46
VRK1-207ENST00000557352 ADCY6O43306 1168 aa5.95□□□□□ -1.46
VRK1-207ENST00000557352 NDUFA10O95299 355 aa5.95□□□□□ -1.46
VRK1-207ENST00000557352 RBP3P10745 1247 aa5.95□□□□□ -1.46
VRK1-207ENST00000557352 MGAT1P26572 445 aa5.95□□□□□ -1.46
VRK1-207ENST00000557352 ADRA1BP35368 520 aa5.95□□□□□ -1.46
VRK1-207ENST00000557352 CDK17Q00537 523 aa5.95□□□□□ -1.46
VRK1-207ENST00000557352 BEAN1Q3B7T3 259 aa5.95□□□□□ -1.46
VRK1-207ENST00000557352 PLXDC1Q8IUK5 500 aa5.95□□□□□ -1.46
VRK1-207ENST00000557352 ARHGEF19Q8IW93 802 aa5.95□□□□□ -1.46
VRK1-207ENST00000557352 RNF169Q8NCN4 708 aa5.95□□□□□ -1.46
VRK1-207ENST00000557352 TFAP2CQ92754 450 aa5.95□□□□□ -1.46
VRK1-207ENST00000557352 SERHL2Q9H4I8 314 aa5.95□□□□□ -1.46
VRK1-207ENST00000557352 ANKFY1Q9P2R3 1169 aa5.95□□□□□ -1.46
VRK1-207ENST00000557352 PHF2O75151 1096 aa5.94□□□□□ -1.46
VRK1-207ENST00000557352 PPFIA2O75334 1257 aa5.94□□□□□ -1.46
VRK1-207ENST00000557352 LMNAP02545 664 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms