RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 NT5DC3Q86UY8 548 aa16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 CRYGNQ8WXF5 182 aa16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 OTUD5Q96G74 571 aa16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 MSTO1Q9BUK6 570 aa16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 INO80BQ9C086 356 aaPredicted RBP16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 AZI2Q9H6S1 392 aa16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 SLC38A10Q9HBR0 1119 aa16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 RAB20Q9NX57 234 aa16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 TBK1Q9UHD2 729 aa16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 GOLGA6L7A0A1B0GV03 622 aa16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 LCA5LO95447 670 aa16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 MAGOHP61326 146 aaKnown RBP16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 WHAMMQ8TF30 809 aa16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 MOV10L1Q9BXT6 1211 aaKnown RBP16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 GJB6O95452 261 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 FGFR4P22455 802 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 HSD17B3P37058 310 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 BACE1P56817 501 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 SGO2Q562F6 1265 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 SV2AQ7L0J3 742 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 LRRC71Q8N4P6 559 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 ATG4AQ8WYN0 398 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 PLVAPQ9BX97 442 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 TRPC6Q9Y210 931 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 GOLGA8SH3BPF8 625 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 CTNND1O60716 968 aaKnown RBP16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 VIMP08670 466 aaKnown RBP16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 HOXA7P31268 230 aaPredicted RBP16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 ACTR2P61160 394 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 TRPC3Q13507 836 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 ANO5Q75V66 913 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 NOP9Q86U38 636 aaKnown RBP16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 ANKRD42Q8N9B4 389 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 NEK9Q8TD19 979 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 CNKSR2Q8WXI2 1034 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 CLEC4DQ8WXI8 215 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 PI4K2BG5E9Z4 385 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 TMEM253P0C7T8 217 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 COL5A3P25940 1745 aaPredicted RBP16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 CNTNAP1P78357 1384 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 IFT88Q13099 833 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 PCNX4Q63HM2 1172 aa16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 CCDC137Q6PK04 289 aaKnown RBP16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 RNF25Q96BH1 459 aaPredicted RBP16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 ACSF2Q96CM8 615 aaPredicted RBP16.47■□□□□ 0.23
TMEM55B-207ENST00000557041 ADCY8P40145 1251 aa16.46■□□□□ 0.23
TMEM55B-207ENST00000557041 TTMPQ5BVD1 217 aa16.46■□□□□ 0.23
TMEM55B-207ENST00000557041 CCDC60Q8IWA6 550 aaPredicted RBP16.46■□□□□ 0.23
TMEM55B-207ENST00000557041 RHOT2Q8IXI1 618 aa16.46■□□□□ 0.23
TMEM55B-207ENST00000557041 ALG3Q92685 438 aa16.46■□□□□ 0.23
TMEM55B-207ENST00000557041 SEMA4DQ92854 862 aa16.46■□□□□ 0.23
TMEM55B-207ENST00000557041 ATP6V0A4Q9HBG4 840 aa16.46■□□□□ 0.23
TMEM55B-207ENST00000557041 CSADQ9Y600 493 aa16.46■□□□□ 0.23
TMEM55B-207ENST00000557041 MAPK7Q13164 816 aa16.46■□□□□ 0.23
TMEM55B-207ENST00000557041 MIS18BP1Q6P0N0 1132 aa16.46■□□□□ 0.23
TMEM55B-207ENST00000557041 RUFY4Q6ZNE9 571 aa16.46■□□□□ 0.23
TMEM55B-207ENST00000557041 TEX13BQ9BXU2 312 aa16.46■□□□□ 0.23
TMEM55B-207ENST00000557041 CCDC188H7C350 402 aa16.46■□□□□ 0.22
TMEM55B-207ENST00000557041 RBAK-RBAKDNI3L0D1 243 aa16.46■□□□□ 0.22
TMEM55B-207ENST00000557041 PPFIA4O75335 1185 aa16.46■□□□□ 0.22
TMEM55B-207ENST00000557041 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.22
TMEM55B-207ENST00000557041 PTGER2P43116 358 aa16.46■□□□□ 0.22
TMEM55B-207ENST00000557041 DYNLT1P63172 113 aa16.46■□□□□ 0.22
TMEM55B-207ENST00000557041 ZNF365Q70YC5 407 aa16.46■□□□□ 0.22
TMEM55B-207ENST00000557041 TRIM50Q86XT4 487 aa16.46■□□□□ 0.22
TMEM55B-207ENST00000557041 MDM1Q8TC05 714 aa16.46■□□□□ 0.22
TMEM55B-207ENST00000557041 TRIM7Q9C029 511 aa16.46■□□□□ 0.22
TMEM55B-207ENST00000557041 ACAD9Q9H845 621 aa16.46■□□□□ 0.22
TMEM55B-207ENST00000557041 AGO2Q9UKV8 859 aaKnown RBP16.46■□□□□ 0.22
TMEM55B-207ENST00000557041 ZMYM2Q9UBW7 1377 aa16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 ZNF536O15090 1300 aa16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 RGS16O15492 202 aaPredicted RBP16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 NPM3O75607 178 aaKnown RBP16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 SCP2P22307 547 aa16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 FMNL3Q8IVF7 1028 aa16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 BSNDQ8WZ55 320 aa16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 KIAA1683Q9H0B3 1180 aa16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 PGK2P07205 417 aa16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 SFNP31947 248 aa16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 STXBP2Q15833 593 aa16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 BMT2Q1RMZ1 405 aa16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 CYP4F22Q6NT55 531 aa16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 FBXO25Q8TCJ0 367 aa16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 PSMD1Q99460 953 aa16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 RBAKQ9NYW8 714 aaPredicted RBP16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 SUCLA2Q9P2R7 463 aaPredicted RBP16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 COG5Q9UP83 839 aa16.45■□□□□ 0.22
TMEM55B-207ENST00000557041 CETN2P41208 172 aa16.44■□□□□ 0.22
TMEM55B-207ENST00000557041 PRKCIP41743 596 aa16.44■□□□□ 0.22
TMEM55B-207ENST00000557041 EAPPQ56P03 285 aaPredicted RBP16.44■□□□□ 0.22
TMEM55B-207ENST00000557041 ARFGAP2Q8N6H7 521 aa16.44■□□□□ 0.22
TMEM55B-207ENST00000557041 A1CFQ9NQ94 594 aaKnown RBP16.44■□□□□ 0.22
TMEM55B-207ENST00000557041 ZNF302Q9NR11 478 aa16.44■□□□□ 0.22
TMEM55B-207ENST00000557041 KCND2Q9NZV8 630 aa16.44■□□□□ 0.22
TMEM55B-207ENST00000557041 FBXO40Q9UH90 709 aa16.44■□□□□ 0.22
TMEM55B-207ENST00000557041 TTC7AQ9ULT0 858 aaPredicted RBP16.44■□□□□ 0.22
TMEM55B-207ENST00000557041 ATRNL1Q5VV63 1379 aa16.44■□□□□ 0.22
TMEM55B-207ENST00000557041 DKC1O60832 514 aaKnown RBP eCLIP16.44■□□□□ 0.22
TMEM55B-207ENST00000557041 MMP14P50281 582 aa16.44■□□□□ 0.22
TMEM55B-207ENST00000557041 ORC1Q13415 861 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms