RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 N4BP2Q86UW6 1770 aaPredicted RBP5.15□□□□□ -1.58
SRP54-212ENST00000556992 A0A0G2JLW4 131 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 KLF18A0A0U1RQI7 1052 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 A0A1W2PQH9 124 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 FSD2A1L4K1 749 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 GOLGA6L4A6NEF3 574 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 CCDC69A6NI79 296 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 C22orf46C9J442 243 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 IFIT3O14879 490 aaKnown RBP5.15□□□□□ -1.59
SRP54-212ENST00000556992 PRKAB2O43741 272 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 IL1R1P14778 569 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 GDF5P43026 501 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 RCAN1P53805 252 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 UBE2HP62256 183 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 CCT2P78371 535 aaKnown RBP5.15□□□□□ -1.59
SRP54-212ENST00000556992 KRT85P78386 507 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 GPSM2P81274 684 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 PPARAQ07869 468 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 DDR1Q08345 913 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 ST3GAL1Q11201 340 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 CHAF1AQ13111 956 aaPredicted RBP5.15□□□□□ -1.59
SRP54-212ENST00000556992 EZH2Q15910 746 aaKnown RBP5.15□□□□□ -1.59
SRP54-212ENST00000556992 PPP2R5EQ16537 467 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 CCDC178Q5BJE1 867 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 PRAMEF18Q5VWM3 479 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 CHST3Q7LGC8 479 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 MILR1Q7Z6M3 343 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 SGMS1Q86VZ5 419 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 DZIP1Q86YF9 867 aaKnown RBP5.15□□□□□ -1.59
SRP54-212ENST00000556992 MIB1Q86YT6 1006 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 AMOTL1Q8IY63 956 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 LCORLQ8N3X6 602 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 ZNF513Q8N8E2 541 aaPredicted RBP5.15□□□□□ -1.59
SRP54-212ENST00000556992 TBC1D22AQ8WUA7 517 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 STAG1Q8WVM7 1258 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 WASF1Q92558 559 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 KISS1RQ969F8 398 aaPredicted RBP5.15□□□□□ -1.59
SRP54-212ENST00000556992 NSUN4Q96CB9 384 aaKnown RBP5.15□□□□□ -1.59
SRP54-212ENST00000556992 ZNF396Q96N95 335 aaPredicted RBP5.15□□□□□ -1.59
SRP54-212ENST00000556992 RIOK1Q9BRS2 568 aaKnown RBP5.15□□□□□ -1.59
SRP54-212ENST00000556992 UBAC1Q9BSL1 405 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 LRRC2Q9BYS8 371 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 AP5M1Q9H0R1 490 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 ATP6V0A2Q9Y487 856 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 SLC12A7Q9Y666 1083 aa5.15□□□□□ -1.59
SRP54-212ENST00000556992 SHANK3Q9BYB0 1731 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 PTPDC1A2A3K4 754 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 GOLGA8BA8MQT2 603 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 B4E1Z4 1266 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 H0YIN7 160 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 SH2B2O14492 632 aaPredicted RBP5.14□□□□□ -1.59
SRP54-212ENST00000556992 GPR42O15529 346 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 ZBTB43O43298 467 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 LAMTOR5O43504 91 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 JAK2O60674 1132 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 UFL1O94874 794 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 CTDNEP1O95476 244 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 AMHP03971 560 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 MMP10P09238 476 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 FGRP09769 529 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 SRGNP10124 158 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 KLRK1P26718 216 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 ANTXR2P58335 489 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 ADAM9Q13443 819 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 CR1LQ2VPA4 569 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 ZSCAN23Q3MJ62 389 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 SBK1Q52WX2 424 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 CAVIN1Q6NZI2 390 aaKnown RBP5.14□□□□□ -1.59
SRP54-212ENST00000556992 CTR9Q6PD62 1173 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 CRIP3Q6Q6R5 217 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 CYB5R4Q7L1T6 521 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 FAM124AQ86V42 546 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 TBC1D10CQ8IV04 446 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 NSUN7Q8NE18 718 aaKnown RBP5.14□□□□□ -1.59
SRP54-212ENST00000556992 TBC1D16Q8TBP0 767 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 GPT2Q8TD30 523 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 ANP32BQ92688 251 aaKnown RBP5.14□□□□□ -1.59
SRP54-212ENST00000556992 MASTLQ96GX5 879 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 LCORQ96JN0 433 aaPredicted RBP5.14□□□□□ -1.59
SRP54-212ENST00000556992 MENTQ9BUN1 341 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 ZNF747Q9BV97 191 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 COA1Q9GZY4 146 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 ZNF287Q9HBT7 754 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 NCOA5Q9HCD5 579 aaKnown RBP5.14□□□□□ -1.59
SRP54-212ENST00000556992 CD209Q9NNX6 404 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 TOMM22Q9NS69 142 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 STK32BQ9NY57 414 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 AKT3Q9Y243 479 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 CNPY2Q9Y2B0 182 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 EFR3BQ9Y2G0 817 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 ELP1O95163 1332 aa5.14□□□□□ -1.59
SRP54-212ENST00000556992 ORC4O43929 436 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 CYP1A1P04798 512 aaPredicted RBP5.13□□□□□ -1.59
SRP54-212ENST00000556992 CALM1P0DP23 149 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 CALM2P0DP24 149 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 CALM3P0DP25 149 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 XRCC6P12956 609 aaKnown RBP eCLIP5.13□□□□□ -1.59
SRP54-212ENST00000556992 FDPSP14324 419 aaKnown RBP5.13□□□□□ -1.59
SRP54-212ENST00000556992 IARSP41252 1262 aaKnown RBP5.13□□□□□ -1.59
SRP54-212ENST00000556992 METAP2P50579 478 aaKnown RBP eCLIP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms