RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 ITGA10O75578 1167 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 IL33O95760 270 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 ADSLP30566 484 aaPredicted RBP5.48□□□□□ -1.53
FCF1-208ENST00000556814 RAB27AP51159 221 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 KIF23Q02241 960 aaPredicted RBP5.48□□□□□ -1.53
FCF1-208ENST00000556814 HHEXQ03014 270 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 PPP3CAQ08209 521 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 DUSP8Q13202 625 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 HS1BP3Q53T59 392 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 FAM111BQ6SJ93 734 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 POLNQ7Z5Q5 900 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 CMTR2Q8IYT2 770 aaKnown RBP5.48□□□□□ -1.53
FCF1-208ENST00000556814 OR7D4Q8NG98 312 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 HDAC10Q969S8 669 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 CYFIP2Q96F07 1278 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 IL17RAQ96F46 866 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 SAMD11Q96NU1 681 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 UHRF1Q96T88 793 aaPredicted RBP5.48□□□□□ -1.53
FCF1-208ENST00000556814 C7orf25Q9BPX7 421 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 SSBP3Q9BWW4 388 aaPredicted RBP5.48□□□□□ -1.53
FCF1-208ENST00000556814 MANSC1Q9H8J5 431 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 AGO3Q9H9G7 860 aaKnown RBP5.48□□□□□ -1.53
FCF1-208ENST00000556814 DMRT3Q9NQL9 472 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 PLA2G3Q9NZ20 509 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 IP6K2Q9UHH9 426 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 TUBD1Q9UJT1 453 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 ZNF180Q9UJW8 692 aa5.48□□□□□ -1.53
FCF1-208ENST00000556814 PATE3B3GLJ2 98 aa5.47□□□□□ -1.53
FCF1-208ENST00000556814 K7ESM1 405 aa5.47□□□□□ -1.53
FCF1-208ENST00000556814 ABLIM3O94929 683 aa5.47□□□□□ -1.53
FCF1-208ENST00000556814 RPLP2P05387 115 aaKnown RBP5.47□□□□□ -1.53
FCF1-208ENST00000556814 CASRP41180 1078 aa5.47□□□□□ -1.53
FCF1-208ENST00000556814 GZMKP49863 264 aa5.47□□□□□ -1.53
FCF1-208ENST00000556814 HMGA2P52926 109 aa5.47□□□□□ -1.53
FCF1-208ENST00000556814 PPP4R3AQ6IN85 833 aa5.47□□□□□ -1.53
FCF1-208ENST00000556814 FUKQ8N0W3 1084 aa5.47□□□□□ -1.53
FCF1-208ENST00000556814 TTC9BQ8N6N2 239 aa5.47□□□□□ -1.53
FCF1-208ENST00000556814 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.47□□□□□ -1.53
FCF1-208ENST00000556814 NRG4Q8WWG1 115 aa5.47□□□□□ -1.53
FCF1-208ENST00000556814 COA7Q96BR5 231 aa5.47□□□□□ -1.53
FCF1-208ENST00000556814 ENKD1Q9H0I2 346 aa5.47□□□□□ -1.53
FCF1-208ENST00000556814 EPC1Q9H2F5 836 aa5.47□□□□□ -1.53
FCF1-208ENST00000556814 TRPS1Q9UHF7 1281 aa5.47□□□□□ -1.53
FCF1-208ENST00000556814 INTUQ9ULD6 942 aa5.47□□□□□ -1.53
FCF1-208ENST00000556814 PNMA8BQ9ULN7 279 aaPredicted RBP5.47□□□□□ -1.53
FCF1-208ENST00000556814 THRAP3Q9Y2W1 955 aaKnown RBP5.47□□□□□ -1.53
FCF1-208ENST00000556814 EID1Q9Y6B2 187 aa5.47□□□□□ -1.53
FCF1-208ENST00000556814 DTNBO60941 627 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 ZNF623O75123 536 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 U2AF1L5P0DN76 240 aaPredicted RBP5.46□□□□□ -1.54
FCF1-208ENST00000556814 ZSCAN20P17040 1043 aaPredicted RBP5.46□□□□□ -1.54
FCF1-208ENST00000556814 COMTP21964 271 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 AKAP5P24588 427 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 U2AF1Q01081 240 aaKnown RBP eCLIP5.46□□□□□ -1.54
FCF1-208ENST00000556814 APBA1Q02410 837 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 UAP1L1Q3KQV9 507 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 FKBP15Q5T1M5 1219 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 Q6ZVL8 140 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 PQLC1Q8N2U9 271 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 CHST13Q8NET6 341 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 DNERQ8NFT8 737 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 HOXB13Q92826 284 aaPredicted RBP5.46□□□□□ -1.54
FCF1-208ENST00000556814 FAM89AQ96GI7 184 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 TMEM176AQ96HP8 235 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 LOXL4Q96JB6 756 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 CDH19Q9H159 772 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 LANCL2Q9NS86 450 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 ZIM2Q9NZV7 527 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 SRRDQ9UH36 339 aa5.46□□□□□ -1.54
FCF1-208ENST00000556814 G3BP2Q9UN86 482 aaKnown RBP5.46□□□□□ -1.54
FCF1-208ENST00000556814 HOXA3O43365 443 aaPredicted RBP5.45□□□□□ -1.54
FCF1-208ENST00000556814 FOXS1O43638 330 aa5.45□□□□□ -1.54
FCF1-208ENST00000556814 RFPL1O75677 317 aa5.45□□□□□ -1.54
FCF1-208ENST00000556814 IPO13O94829 963 aaKnown RBP5.45□□□□□ -1.54
FCF1-208ENST00000556814 ZRANB2O95218 330 aaKnown RBP eCLIP5.45□□□□□ -1.54
FCF1-208ENST00000556814 PF4V1P10720 104 aa5.45□□□□□ -1.54
FCF1-208ENST00000556814 PTPN7P35236 360 aa5.45□□□□□ -1.54
FCF1-208ENST00000556814 MSX2P35548 267 aaPredicted RBP5.45□□□□□ -1.54
FCF1-208ENST00000556814 MRPL49Q13405 166 aaKnown RBP5.45□□□□□ -1.54
FCF1-208ENST00000556814 PPP2R5AQ15172 486 aa5.45□□□□□ -1.54
FCF1-208ENST00000556814 NFE2Q16621 373 aaPredicted RBP5.45□□□□□ -1.54
FCF1-208ENST00000556814 ANKRD35Q8N283 1001 aa5.45□□□□□ -1.54
FCF1-208ENST00000556814 D2HGDHQ8N465 521 aa5.45□□□□□ -1.54
FCF1-208ENST00000556814 JPH3Q8WXH2 748 aaPredicted RBP5.45□□□□□ -1.54
FCF1-208ENST00000556814 ZNF512Q96ME7 567 aaPredicted RBP5.45□□□□□ -1.54
FCF1-208ENST00000556814 RHOBTB2Q9BYZ6 727 aa5.45□□□□□ -1.54
FCF1-208ENST00000556814 SENP6Q9GZR1 1112 aaPredicted RBP5.45□□□□□ -1.54
FCF1-208ENST00000556814 TMEM140Q9NV12 185 aa5.45□□□□□ -1.54
FCF1-208ENST00000556814 MOCS1Q9NZB8 636 aa5.45□□□□□ -1.54
FCF1-208ENST00000556814 CLCA2Q9UQC9 943 aa5.45□□□□□ -1.54
FCF1-208ENST00000556814 TCAF1Q9Y4C2 921 aa5.45□□□□□ -1.54
FCF1-208ENST00000556814 CCDC154A6NI56 674 aa5.44□□□□□ -1.54
FCF1-208ENST00000556814 CYP27B1O15528 508 aa5.44□□□□□ -1.54
FCF1-208ENST00000556814 TEX33O43247 280 aa5.44□□□□□ -1.54
FCF1-208ENST00000556814 HTRA2O43464 458 aaPredicted RBP5.44□□□□□ -1.54
FCF1-208ENST00000556814 SGTAO43765 313 aa5.44□□□□□ -1.54
FCF1-208ENST00000556814 MFAP3LO75121 409 aa5.44□□□□□ -1.54
FCF1-208ENST00000556814 IL2RBP14784 551 aa5.44□□□□□ -1.54
FCF1-208ENST00000556814 GNAT2P19087 354 aa5.44□□□□□ -1.54
FCF1-208ENST00000556814 CYP2C19P33261 490 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms