RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 SMC1AQ14683 1233 aaKnown RBP12.22□□□□□ -0.45
CHGA-205ENST00000556098 PRR16Q569H4 304 aa12.22□□□□□ -0.45
CHGA-205ENST00000556098 UBALD2Q8IYN6 164 aa12.22□□□□□ -0.45
CHGA-205ENST00000556098 CRIPAKQ8N1N5 446 aa12.22□□□□□ -0.45
CHGA-205ENST00000556098 TMEM40Q8WWA1 233 aa12.22□□□□□ -0.45
CHGA-205ENST00000556098 RAD54LQ92698 747 aa12.22□□□□□ -0.45
CHGA-205ENST00000556098 SCLT1Q96NL6 688 aa12.22□□□□□ -0.45
CHGA-205ENST00000556098 HINFPQ9BQA5 517 aa12.22□□□□□ -0.45
CHGA-205ENST00000556098 MMTAG2Q9BU76 263 aaKnown RBP12.22□□□□□ -0.45
CHGA-205ENST00000556098 POLR3CQ9BUI4 534 aaPredicted RBP12.22□□□□□ -0.45
CHGA-205ENST00000556098 TUFT1Q9NNX1 390 aa12.22□□□□□ -0.45
CHGA-205ENST00000556098 LIMD1Q9UGP4 676 aa12.22□□□□□ -0.45
CHGA-205ENST00000556098 TCEAL9Q9UHQ7 104 aa12.22□□□□□ -0.45
CHGA-205ENST00000556098 ZFHX2Q9C0A1 2572 aaPredicted RBP12.22□□□□□ -0.45
CHGA-205ENST00000556098 C9IYK1 514 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 MEIS1O00470 390 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 KIF20AO95235 890 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 ZNF75DP51815 510 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 NCAPHQ15003 741 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 FAM160B1Q5W0V3 765 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 ASTLQ6HA08 431 aaPredicted RBP12.21□□□□□ -0.45
CHGA-205ENST00000556098 KCNT2Q6UVM3 1135 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 FAM228AQ86W67 206 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 NME8Q8N427 588 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 CYP2W1Q8TAV3 490 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 NOC3LQ8WTT2 800 aaKnown RBP12.21□□□□□ -0.45
CHGA-205ENST00000556098 AUTS2Q8WXX7 1259 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 SLC5A5Q92911 643 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 MXRA8Q9BRK3 442 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 TRIM9Q9C026 710 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 KCNH7Q9NS40 1196 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 EXOC1Q9NV70 894 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 TMEM161AQ9NX61 479 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 IMPACTQ9P2X3 320 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 RWDD2AQ9UIY3 292 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 FBXL21Q9UKT6 434 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 AKT3Q9Y243 479 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 HCFC2Q9Y5Z7 792 aa12.21□□□□□ -0.45
CHGA-205ENST00000556098 MTCL1Q9Y4B5 1905 aaKnown RBP12.21□□□□□ -0.46
CHGA-205ENST00000556098 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.2□□□□□ -0.46
CHGA-205ENST00000556098 BICDL2A1A5D9 508 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 POTEMA6NI47 508 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 FAM86B1E9PN63 330 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 PSMA7O14818 248 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 MSH4O15457 936 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 FAM86B2P0C5J1 330 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 ZSCAN20P17040 1043 aaPredicted RBP12.2□□□□□ -0.46
CHGA-205ENST00000556098 HOXB8P17481 243 aaPredicted RBP12.2□□□□□ -0.46
CHGA-205ENST00000556098 CCT6AP40227 531 aaKnown RBP12.2□□□□□ -0.46
CHGA-205ENST00000556098 MTHFRP42898 656 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 GSDMDP57764 484 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 PLCB2Q00722 1185 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 SPIRE1Q08AE8 756 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 SPATA1Q5VX52 437 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 LRRC55Q6ZSA7 311 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 UNC13DQ70J99 1090 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 PLPPR4Q7Z2D5 763 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 ZSCAN30Q86W11 494 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 LRRC43Q8N309 656 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 ANKRD20A12PQ8NF67 263 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 RDM1Q8NG50 284 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 HELQQ8TDG4 1101 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 ERCC4Q92889 916 aaPredicted RBP12.2□□□□□ -0.46
CHGA-205ENST00000556098 DHTKD1Q96HY7 919 aaPredicted RBP12.2□□□□□ -0.46
CHGA-205ENST00000556098 NECTIN4Q96NY8 510 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 TEKT3Q9BXF9 490 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 TMEM117Q9H0C3 514 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 NGRNQ9NPE2 291 aaKnown RBP12.2□□□□□ -0.46
CHGA-205ENST00000556098 ZNF302Q9NR11 478 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 TBC1D22BQ9NU19 505 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 SPG21Q9NZD8 308 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 KCND2Q9NZV8 630 aa12.2□□□□□ -0.46
CHGA-205ENST00000556098 SPTBN4Q9H254 2564 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 PP2D1A8MPX8 630 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 PROB1E7EW31 1015 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 NRDCO43847 1150 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 HBP1O60381 514 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 GAS7O60861 476 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 CLASP2O75122 1294 aaKnown RBP12.19□□□□□ -0.46
CHGA-205ENST00000556098 CXCL14O95715 111 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 PRKCSHP14314 528 aaPredicted RBP12.19□□□□□ -0.46
CHGA-205ENST00000556098 BMP6P22004 513 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 FGFR4P22455 802 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 MSNP26038 577 aaKnown RBP12.19□□□□□ -0.46
CHGA-205ENST00000556098 PPM1AP35813 382 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 NBL1P41271 181 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 CLCN3P51790 818 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 PLCB3Q01970 1234 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 PAK1Q13153 545 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 ITGB3BPQ13352 177 aaPredicted RBP12.19□□□□□ -0.46
CHGA-205ENST00000556098 CUL4BQ13620 913 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 LRCH2Q5VUJ6 765 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 TMC5Q6UXY8 1006 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 KIAA0319LQ8IZA0 1049 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 CASD1Q96PB1 797 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 PNMA5Q96PV4 448 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 MTRQ99707 1265 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 ADAM7Q9H2U9 754 aa12.19□□□□□ -0.46
CHGA-205ENST00000556098 AGO4Q9HCK5 861 aaKnown RBP12.19□□□□□ -0.46
CHGA-205ENST00000556098 BLOC1S4Q9NUP1 217 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms