RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 SERPINC1P01008 464 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 EDN1P05305 212 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 ATP1A3P13637 1013 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 SELPP16109 830 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 ARF4P18085 180 aaPredicted RBP12.04□□□□□ -0.48
TMEM260-208ENST00000555905 EN2P19622 333 aaPredicted RBP12.04□□□□□ -0.48
TMEM260-208ENST00000555905 FGFR4P22455 802 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 ADSSP30520 456 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 MTIF2P46199 727 aaKnown RBP12.04□□□□□ -0.48
TMEM260-208ENST00000555905 MCL1Q07820 350 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 PAK2Q13177 524 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 NOLC1Q14978 699 aaKnown RBP eCLIP12.04□□□□□ -0.48
TMEM260-208ENST00000555905 ZNF568Q3ZCX4 644 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 FBXO47Q5MNV8 452 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 NOTUMQ6P988 496 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 LRRC8DQ7L1W4 858 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 ZBTB33Q86T24 672 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 GPD1LQ8N335 351 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 TMEM40Q8WWA1 233 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 CPB2Q96IY4 423 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 ZBTB45Q96K62 511 aaPredicted RBP12.04□□□□□ -0.48
TMEM260-208ENST00000555905 CNOT6LQ96LI5 555 aaKnown RBP12.04□□□□□ -0.48
TMEM260-208ENST00000555905 ADPGKQ9BRR6 497 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 MKNK1Q9BUB5 465 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 METTL14Q9HCE5 456 aaKnown RBP12.04□□□□□ -0.48
TMEM260-208ENST00000555905 AGPAT5Q9NUQ2 364 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 AGO2Q9UKV8 859 aaKnown RBP12.04□□□□□ -0.48
TMEM260-208ENST00000555905 NOC2LQ9Y3T9 749 aaKnown RBP12.04□□□□□ -0.48
TMEM260-208ENST00000555905 A0A0B4J269 797 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 A0A1B0GUA9 196 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 MAPK13O15264 365 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 OGTO15294 1046 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 EXTL3O43909 919 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 AKAP3O75969 853 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 MCF2P10911 925 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 GHRP10912 638 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 HARSP12081 509 aaKnown RBP12.03□□□□□ -0.48
TMEM260-208ENST00000555905 KRT13P13646 458 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 PROZP22891 400 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 FAAP100Q0VG06 881 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 NFX1Q12986 1120 aaKnown RBP12.03□□□□□ -0.48
TMEM260-208ENST00000555905 LRRC26Q2I0M4 334 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 DCAF4L1Q3SXM0 396 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 FILIP1LQ4L180 1135 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 SLC27A1Q6PCB7 646 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 FRMD5Q7Z6J6 570 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 FAM228AQ86W67 206 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 IRF2BP1Q8IU81 584 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 FAM186BQ8IYM0 893 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 ANP32BQ92688 251 aaKnown RBP12.03□□□□□ -0.48
TMEM260-208ENST00000555905 SAAL1Q96ER3 474 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 CCDC51Q96ER9 411 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 FAM213AQ9BRX8 229 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 NOC4LQ9BVI4 516 aaKnown RBP12.03□□□□□ -0.48
TMEM260-208ENST00000555905 HIPK3Q9H422 1215 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 PDZD7Q9H5P4 517 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 PTPRHQ9HD43 1115 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 TMEM39AQ9NV64 488 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 ARMCX3Q9UH62 379 aaPredicted RBP12.03□□□□□ -0.48
TMEM260-208ENST00000555905 ST3GAL5Q9UNP4 418 aa12.03□□□□□ -0.48
TMEM260-208ENST00000555905 PIN4Q9Y237 131 aaKnown RBP12.03□□□□□ -0.48
TMEM260-208ENST00000555905 GOLGA8IPA6NC78 632 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 ZNF233A6NK53 670 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 GOLGA8JA6NMD2 632 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 CBFA2T2O43439 604 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 PARNO95453 639 aaKnown RBP12.02□□□□□ -0.49
TMEM260-208ENST00000555905 TPM3P06753 285 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 CLTBP09497 229 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 PRKCSHP14314 528 aaPredicted RBP12.02□□□□□ -0.49
TMEM260-208ENST00000555905 HOXA11P31270 313 aaPredicted RBP12.02□□□□□ -0.49
TMEM260-208ENST00000555905 CASP4P49662 377 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 MARSP56192 900 aaKnown RBP12.02□□□□□ -0.49
TMEM260-208ENST00000555905 FANCCQ00597 558 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 LPIN1Q14693 890 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 KRT31Q15323 416 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 SNRNP35Q16560 246 aaKnown RBP12.02□□□□□ -0.49
TMEM260-208ENST00000555905 KYAT1Q16773 422 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 EEF1DP3Q658K8 133 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 SARM1Q6SZW1 724 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 INTS8Q75QN2 995 aaKnown RBP12.02□□□□□ -0.49
TMEM260-208ENST00000555905 USP37Q86T82 979 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 RDH13Q8NBN7 331 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 FBXL18Q96ME1 805 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 TUBGCP2Q9BSJ2 902 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 TRIM6Q9C030 488 aaPredicted RBP12.02□□□□□ -0.49
TMEM260-208ENST00000555905 TRIM5Q9C035 493 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 HAPLN2Q9GZV7 340 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 CDT1Q9H211 546 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 ERVK-5Q9HDB9 667 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 CHST12Q9NRB3 414 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 LIMA1Q9UHB6 759 aaKnown RBP12.02□□□□□ -0.49
TMEM260-208ENST00000555905 PADI3Q9ULW8 664 aa12.02□□□□□ -0.49
TMEM260-208ENST00000555905 TULP1O00294 542 aaPredicted RBP12.01□□□□□ -0.49
TMEM260-208ENST00000555905 ABLIM1O14639 778 aa12.01□□□□□ -0.49
TMEM260-208ENST00000555905 ZSCAN20P17040 1043 aaPredicted RBP12.01□□□□□ -0.49
TMEM260-208ENST00000555905 CD52P31358 61 aa12.01□□□□□ -0.49
TMEM260-208ENST00000555905 UBASH3AP57075 661 aa12.01□□□□□ -0.49
TMEM260-208ENST00000555905 PPP2R3AQ06190 1150 aa12.01□□□□□ -0.49
TMEM260-208ENST00000555905 MAN2A1Q16706 1144 aa12.01□□□□□ -0.49
TMEM260-208ENST00000555905 TWF2Q6IBS0 349 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms