RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 OCRLQ01968 901 aa5.46□□□□□ -1.54
SCFD1-216ENST00000555550 NHLH2Q02577 135 aa5.46□□□□□ -1.54
SCFD1-216ENST00000555550 BEAN1Q3B7T3 259 aa5.46□□□□□ -1.54
SCFD1-216ENST00000555550 KIAA1841Q6NSI8 718 aa5.46□□□□□ -1.54
SCFD1-216ENST00000555550 BHLHA9Q7RTU4 235 aa5.46□□□□□ -1.54
SCFD1-216ENST00000555550 EFHBQ8N7U6 833 aa5.46□□□□□ -1.54
SCFD1-216ENST00000555550 CPEB3Q8NE35 698 aaKnown RBP5.46□□□□□ -1.54
SCFD1-216ENST00000555550 LINC00476Q8WZB0 136 aa5.46□□□□□ -1.54
SCFD1-216ENST00000555550 MAP3K2Q9Y2U5 619 aa5.46□□□□□ -1.54
SCFD1-216ENST00000555550 CHST2Q9Y4C5 530 aa5.46□□□□□ -1.54
SCFD1-216ENST00000555550 ST20-MTHFSA0A0A6YYL1 179 aa5.45□□□□□ -1.54
SCFD1-216ENST00000555550 PIPSLA2A3N6 862 aa5.45□□□□□ -1.54
SCFD1-216ENST00000555550 LY86O95711 162 aa5.45□□□□□ -1.54
SCFD1-216ENST00000555550 HKR1P10072 659 aa5.45□□□□□ -1.54
SCFD1-216ENST00000555550 GZMKP49863 264 aa5.45□□□□□ -1.54
SCFD1-216ENST00000555550 GUCY1B3Q02153 619 aa5.45□□□□□ -1.54
SCFD1-216ENST00000555550 TP53BP2Q13625 1128 aa5.45□□□□□ -1.54
SCFD1-216ENST00000555550 HDGFL2Q7Z4V5 671 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-216ENST00000555550 KIAA0907Q7Z7F0 614 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-216ENST00000555550 C11orf74Q86VG3 221 aa5.45□□□□□ -1.54
SCFD1-216ENST00000555550 BOLLQ8N9W6 283 aaKnown RBP5.45□□□□□ -1.54
SCFD1-216ENST00000555550 FAM98AQ8NCA5 519 aaKnown RBP5.45□□□□□ -1.54
SCFD1-216ENST00000555550 PPP1R14CQ8TAE6 165 aa5.45□□□□□ -1.54
SCFD1-216ENST00000555550 LEO1Q8WVC0 666 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-216ENST00000555550 FERMT2Q96AC1 680 aa5.45□□□□□ -1.54
SCFD1-216ENST00000555550 COQ10AQ96MF6 247 aa5.45□□□□□ -1.54
SCFD1-216ENST00000555550 MYPNQ86TC9 1320 aa5.45□□□□□ -1.54
SCFD1-216ENST00000555550 GAGE12BA1L429 117 aa5.44□□□□□ -1.54
SCFD1-216ENST00000555550 FAM83GA6ND36 823 aa5.44□□□□□ -1.54
SCFD1-216ENST00000555550 GAGE12HA6NDE8 117 aa5.44□□□□□ -1.54
SCFD1-216ENST00000555550 PRR5-ARHGAP8B1AHC4 643 aa5.44□□□□□ -1.54
SCFD1-216ENST00000555550 ENPP3O14638 875 aa5.44□□□□□ -1.54
SCFD1-216ENST00000555550 MYCLP1P12525 358 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-216ENST00000555550 HSP90B1P14625 803 aaKnown RBP5.44□□□□□ -1.54
SCFD1-216ENST00000555550 ZSCAN20P17040 1043 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-216ENST00000555550 BMPR1AP36894 532 aa5.44□□□□□ -1.54
SCFD1-216ENST00000555550 ERCC6LQ2NKX8 1250 aa5.44□□□□□ -1.54
SCFD1-216ENST00000555550 PDCD4Q53EL6 469 aaKnown RBP5.44□□□□□ -1.54
SCFD1-216ENST00000555550 DOK3Q7L591 496 aa5.44□□□□□ -1.54
SCFD1-216ENST00000555550 GPRIN1Q7Z2K8 1008 aa5.44□□□□□ -1.54
SCFD1-216ENST00000555550 MSL3Q8N5Y2 521 aaKnown RBP5.44□□□□□ -1.54
SCFD1-216ENST00000555550 LRFN3Q9BTN0 628 aa5.44□□□□□ -1.54
SCFD1-216ENST00000555550 SLKQ9H2G2 1235 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-216ENST00000555550 ZMAT4Q9H898 229 aa5.44□□□□□ -1.54
SCFD1-216ENST00000555550 SPTLC3Q9NUV7 552 aa5.44□□□□□ -1.54
SCFD1-216ENST00000555550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.44□□□□□ -1.54
SCFD1-216ENST00000555550 MSRAQ9UJ68 235 aa5.44□□□□□ -1.54
SCFD1-216ENST00000555550 USP18Q9UMW8 372 aa5.44□□□□□ -1.54
SCFD1-216ENST00000555550 ELL2O00472 640 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-216ENST00000555550 PDE8AO60658 829 aa5.43□□□□□ -1.54
SCFD1-216ENST00000555550 RAB11FIP3O75154 756 aa5.43□□□□□ -1.54
SCFD1-216ENST00000555550 LSP1P33241 339 aa5.43□□□□□ -1.54
SCFD1-216ENST00000555550 DUSP2Q05923 314 aa5.43□□□□□ -1.54
SCFD1-216ENST00000555550 LRRC32Q14392 662 aa5.43□□□□□ -1.54
SCFD1-216ENST00000555550 SEPT7Q16181 437 aaKnown RBP5.43□□□□□ -1.54
SCFD1-216ENST00000555550 ANKS6Q68DC2 871 aa5.43□□□□□ -1.54
SCFD1-216ENST00000555550 ESPNLQ6ZVH7 1005 aa5.43□□□□□ -1.54
SCFD1-216ENST00000555550 UNC5BQ8IZJ1 945 aa5.43□□□□□ -1.54
SCFD1-216ENST00000555550 SMC1BQ8NDV3 1235 aa5.43□□□□□ -1.54
SCFD1-216ENST00000555550 ADAM2Q99965 735 aa5.43□□□□□ -1.54
SCFD1-216ENST00000555550 SPATA5L1Q9BVQ7 753 aa5.43□□□□□ -1.54
SCFD1-216ENST00000555550 TMA7Q9Y2S6 64 aaKnown RBP5.43□□□□□ -1.54
SCFD1-216ENST00000555550 SALL3Q9BXA9 1300 aa5.43□□□□□ -1.54
SCFD1-216ENST00000555550 TGM5O43548 720 aa5.42□□□□□ -1.54
SCFD1-216ENST00000555550 FKBP9O95302 570 aa5.42□□□□□ -1.54
SCFD1-216ENST00000555550 MPLP40238 635 aa5.42□□□□□ -1.54
SCFD1-216ENST00000555550 LSSP48449 732 aa5.42□□□□□ -1.54
SCFD1-216ENST00000555550 WNT3AP56704 352 aa5.42□□□□□ -1.54
SCFD1-216ENST00000555550 FKBP9P1Q75LS8 142 aa5.42□□□□□ -1.54
SCFD1-216ENST00000555550 TAS1R1Q7RTX1 841 aa5.42□□□□□ -1.54
SCFD1-216ENST00000555550 ASB10Q8WXI3 467 aa5.42□□□□□ -1.54
SCFD1-216ENST00000555550 USP7Q93009 1102 aa5.42□□□□□ -1.54
SCFD1-216ENST00000555550 FDXACB1Q9BRP7 624 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-216ENST00000555550 ALG13Q9NP73 1137 aaKnown RBP5.42□□□□□ -1.54
SCFD1-216ENST00000555550 USP36Q9P275 1121 aaKnown RBP5.42□□□□□ -1.54
SCFD1-216ENST00000555550 TBX22Q9Y458 520 aa5.42□□□□□ -1.54
SCFD1-216ENST00000555550 PCDHB6Q9Y5E3 794 aa5.42□□□□□ -1.54
SCFD1-216ENST00000555550 ZMYM3Q14202 1370 aa5.42□□□□□ -1.54
SCFD1-216ENST00000555550 TLDC2A0PJX2 215 aa5.41□□□□□ -1.54
SCFD1-216ENST00000555550 SPDEFO95238 335 aa5.41□□□□□ -1.54
SCFD1-216ENST00000555550 DDX6P26196 483 aaKnown RBP eCLIP5.41□□□□□ -1.54
SCFD1-216ENST00000555550 ADCYAP1R1P41586 468 aa5.41□□□□□ -1.54
SCFD1-216ENST00000555550 GYS2P54840 703 aa5.41□□□□□ -1.54
SCFD1-216ENST00000555550 ELLP55199 621 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-216ENST00000555550 RESTQ13127 1097 aa5.41□□□□□ -1.54
SCFD1-216ENST00000555550 ZNF362Q5T0B9 420 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-216ENST00000555550 BTNL9Q6UXG8 535 aa5.41□□□□□ -1.54
SCFD1-216ENST00000555550 PLXDC1Q8IUK5 500 aa5.41□□□□□ -1.54
SCFD1-216ENST00000555550 SLC44A3Q8N4M1 653 aa5.41□□□□□ -1.54
SCFD1-216ENST00000555550 OR10H5Q8NGA6 315 aa5.41□□□□□ -1.54
SCFD1-216ENST00000555550 POGKQ9P215 609 aa5.41□□□□□ -1.54
SCFD1-216ENST00000555550 FRMD4BQ9Y2L6 1034 aa5.41□□□□□ -1.54
SCFD1-216ENST00000555550 LCHNA4D1U4 455 aa5.4□□□□□ -1.54
SCFD1-216ENST00000555550 MYADML2A6NDP7 307 aa5.4□□□□□ -1.54
SCFD1-216ENST00000555550 GSG1L2A8MUP6 293 aa5.4□□□□□ -1.54
SCFD1-216ENST00000555550 ESRRBO95718 433 aa5.4□□□□□ -1.54
SCFD1-216ENST00000555550 CLEC2LP0C7M8 214 aa5.4□□□□□ -1.54
SCFD1-216ENST00000555550 EGR2P11161 476 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-216ENST00000555550 XPAP23025 273 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-216ENST00000555550 APBA1Q02410 837 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms