RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 LILRB5O75023 590 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 CPA1P15085 419 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 GNA11P29992 359 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 PRKCQQ04759 706 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 FZD5Q13467 585 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 USP41Q3LFD5 358 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 PPM1JQ5JR12 505 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 ZBTB41Q5SVQ8 909 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 FUT10Q6P4F1 479 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 TPRG1Q6ZUI0 275 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 DHX32Q7L7V1 743 aaKnown RBP9.37□□□□□ -0.91
NEK9-206ENST00000555537 NELL1Q92832 810 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 ESYT1Q9BSJ8 1104 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 EPC1Q9H2F5 836 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 ANO2Q9NQ90 1003 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 HCFC1R1Q9NWW0 138 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 KLK14Q9P0G3 267 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 FNIP2Q9P278 1114 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 MIA3Q5JRA6 1907 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 MTCL1Q9Y4B5 1905 aaKnown RBP9.37□□□□□ -0.91
NEK9-206ENST00000555537 PATJQ8NI35 1801 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.36□□□□□ -0.91
NEK9-206ENST00000555537 SHISA7A6NL88 538 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 ZBTB39O15060 712 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 ADAM12O43184 909 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 PRPF3O43395 683 aaKnown RBP9.36□□□□□ -0.91
NEK9-206ENST00000555537 NR1I2O75469 434 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 TADA2AO75478 443 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 TDP2O95551 362 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 KCNA4P22459 653 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 AKAP5P24588 427 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 USP11P51784 963 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 LAMTOR4Q0VGL1 99 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 MTAPQ13126 283 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 RTP2Q5QGT7 225 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 PPM1LQ5SGD2 360 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 POTEHQ6S545 545 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 B3GNT9Q6UX72 402 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 SRGAP1Q7Z6B7 1085 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 CDR2LQ86X02 465 aaPredicted RBP9.36□□□□□ -0.91
NEK9-206ENST00000555537 CEP57Q86XR8 500 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 RASEFQ8IZ41 740 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 RNF149Q8NC42 400 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 GSTCDQ8NEC7 633 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 TBCKQ8TEA7 893 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 HASPINQ8TF76 798 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 ING5Q8WYH8 240 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 CLDN23Q96B33 292 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 MCRS1Q96EZ8 462 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 BORCS6Q96GS4 357 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 CEP170P1Q96L14 293 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 MBOAT7Q96N66 472 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 CLSTN3Q9BQT9 956 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 PAAF1Q9BRP4 392 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 PHF20Q9BVI0 1012 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 OSBPL6Q9BZF3 934 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 UBN1Q9NPG3 1134 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 HEBP1Q9NRV9 189 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 VPS54Q9P1Q0 977 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 WRAP73Q9P2S5 460 aaPredicted RBP9.36□□□□□ -0.91
NEK9-206ENST00000555537 GMEB2Q9UKD1 530 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 ADAM28Q9UKQ2 775 aa9.36□□□□□ -0.91
NEK9-206ENST00000555537 ZFP37Q9Y6Q3 630 aaPredicted RBP9.36□□□□□ -0.91
NEK9-206ENST00000555537 TBC1D4O60343 1298 aa9.35□□□□□ -0.91
NEK9-206ENST00000555537 GDF9O60383 454 aa9.35□□□□□ -0.91
NEK9-206ENST00000555537 TSPAN1O60635 241 aa9.35□□□□□ -0.91
NEK9-206ENST00000555537 C8AP07357 584 aa9.35□□□□□ -0.91
NEK9-206ENST00000555537 PSMC5P62195 406 aa9.35□□□□□ -0.91
NEK9-206ENST00000555537 Q4G0T1 1027 aa9.35□□□□□ -0.91
NEK9-206ENST00000555537 MTSS1LQ765P7 747 aa9.35□□□□□ -0.91
NEK9-206ENST00000555537 CNNM3Q8NE01 707 aa9.35□□□□□ -0.91
NEK9-206ENST00000555537 RDM1Q8NG50 284 aa9.35□□□□□ -0.91
NEK9-206ENST00000555537 LNX1Q8TBB1 728 aaPredicted RBP9.35□□□□□ -0.91
NEK9-206ENST00000555537 CCDC12Q8WUD4 166 aaPredicted RBP9.35□□□□□ -0.91
NEK9-206ENST00000555537 PSPC1Q8WXF1 523 aaKnown RBP9.35□□□□□ -0.91
NEK9-206ENST00000555537 NXF3Q9H4D5 531 aaKnown RBP9.35□□□□□ -0.91
NEK9-206ENST00000555537 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.35□□□□□ -0.91
NEK9-206ENST00000555537 DNMT3BQ9UBC3 853 aaKnown RBP9.35□□□□□ -0.91
NEK9-206ENST00000555537 FBXW11Q9UKB1 542 aa9.35□□□□□ -0.91
NEK9-206ENST00000555537 NDRG2Q9UN36 371 aaKnown RBP9.35□□□□□ -0.91
NEK9-206ENST00000555537 CEP250Q9BV73 2442 aa9.34□□□□□ -0.91
NEK9-206ENST00000555537 GPR179Q6PRD1 2367 aa9.34□□□□□ -0.91
NEK9-206ENST00000555537 NRG2O14511 850 aaPredicted RBP9.34□□□□□ -0.91
NEK9-206ENST00000555537 SLC30A4O14863 429 aa9.34□□□□□ -0.91
NEK9-206ENST00000555537 NCAM2O15394 837 aa9.34□□□□□ -0.91
NEK9-206ENST00000555537 ERLIN2O94905 339 aa9.34□□□□□ -0.91
NEK9-206ENST00000555537 C1RP00736 705 aa9.34□□□□□ -0.91
NEK9-206ENST00000555537 IGFBP6P24592 240 aaPredicted RBP9.34□□□□□ -0.91
NEK9-206ENST00000555537 FGD1P98174 961 aa9.34□□□□□ -0.91
NEK9-206ENST00000555537 PFKPQ01813 784 aa9.34□□□□□ -0.91
NEK9-206ENST00000555537 FAM171A1Q5VUB5 890 aa9.34□□□□□ -0.91
NEK9-206ENST00000555537 TANGO2Q6ICL3 276 aa9.34□□□□□ -0.91
NEK9-206ENST00000555537 RSPO2Q6UXX9 243 aaPredicted RBP9.34□□□□□ -0.91
NEK9-206ENST00000555537 ZNF852Q6ZMS4 543 aa9.34□□□□□ -0.91
NEK9-206ENST00000555537 PRR23BQ6ZRT6 265 aa9.34□□□□□ -0.91
NEK9-206ENST00000555537 FERMT3Q86UX7 667 aa9.34□□□□□ -0.91
NEK9-206ENST00000555537 NPAS3Q8IXF0 933 aa9.34□□□□□ -0.91
NEK9-206ENST00000555537 ETNPPLQ8TBG4 499 aa9.34□□□□□ -0.91
NEK9-206ENST00000555537 BICD2Q8TD16 824 aa9.34□□□□□ -0.91
NEK9-206ENST00000555537 SLC7A3Q8WY07 619 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms