RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 POTEB3A0JP26 581 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 LGALS16A8MUM7 142 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 ZC3H11AO75152 810 aaKnown RBP eCLIP8.95□□□□□ -0.98
LINC00641-201ENST00000555379 KLHL38Q2WGJ6 581 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 ATG16L1Q676U5 607 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 POTEBQ6S5H4 581 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 MXRA8Q9BRK3 442 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 WNT8AQ9H1J5 351 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 NXF1Q9UBU9 619 aaKnown RBP8.95□□□□□ -0.98
LINC00641-201ENST00000555379 UBQLN1Q9UMX0 589 aaKnown RBP8.95□□□□□ -0.98
LINC00641-201ENST00000555379 CDC27P30260 824 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 CTNNA1P35221 906 aaKnown RBP8.95□□□□□ -0.98
LINC00641-201ENST00000555379 PPATQ06203 517 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 KRT33BQ14525 404 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 UBE2SQ16763 222 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 CCDC144BQ3MJ40 725 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 RICTORQ6R327 1708 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 TRAPPC11Q7Z392 1133 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 FBXL13Q8NEE6 735 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 SUCLA2Q9P2R7 463 aaPredicted RBP8.95□□□□□ -0.98
LINC00641-201ENST00000555379 CDC23Q9UJX2 597 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 MROH1Q8NDA8 1641 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 KPNA7A9QM74 516 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 SGK1O00141 431 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 RPS6KA5O75582 802 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 KRT37O76014 449 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 NDUFB10O96000 172 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 PSMA2P25787 234 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 SLC20A2Q08357 652 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 GTF2H3Q13889 308 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 ATG9AQ7Z3C6 839 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 IFT43Q96FT9 208 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 EIF2AK1Q9BQI3 630 aaKnown RBP8.95□□□□□ -0.98
LINC00641-201ENST00000555379 TEX12Q9BXU0 123 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 FGFR1OP2Q9NVK5 253 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 ADAM22Q9P0K1 906 aa8.95□□□□□ -0.98
LINC00641-201ENST00000555379 SNUPNO95149 360 aaKnown RBP8.94□□□□□ -0.98
LINC00641-201ENST00000555379 CLTAP09496 248 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 PLS3P13797 630 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 CPB1P15086 417 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 CAP2P40123 477 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 RPL10AP62906 217 aaKnown RBP8.94□□□□□ -0.98
LINC00641-201ENST00000555379 TMED2Q15363 201 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 TRADDQ15628 312 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 SLFNL1Q499Z3 407 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 TCP11X2Q5H9J9 407 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 SWSAP1Q6NVH7 229 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 KLHL7Q8IXQ5 586 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 DNAAF3Q8N9W5 541 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 GANCQ8TET4 914 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 MAGOHBQ96A72 148 aaKnown RBP8.94□□□□□ -0.98
LINC00641-201ENST00000555379 DYDC2Q96IM9 177 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 ZWILCHQ9H900 591 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 XAB2Q9HCS7 855 aaKnown RBP8.94□□□□□ -0.98
LINC00641-201ENST00000555379 EPS15L1Q9UBC2 864 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 MROH7Q68CQ1 1323 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 MAN1A2O60476 641 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 PMLP29590 882 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 MSH2P43246 934 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 ARL4CP56559 192 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 COASYQ13057 564 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 TAF2Q6P1X5 1199 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 RRN3Q9NYV6 651 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 UVRAGQ9P2Y5 699 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 KRT38O76015 456 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 KRT75O95678 551 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 GYS1P13807 737 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 FXR2P51116 673 aaKnown RBP eCLIP8.94□□□□□ -0.98
LINC00641-201ENST00000555379 RASSF7Q02833 373 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 CTTNQ14247 550 aaKnown RBP8.94□□□□□ -0.98
LINC00641-201ENST00000555379 C9orf131Q5VYM1 1079 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 C17orf50Q8WW18 174 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 FAM163AQ96GL9 167 aaPredicted RBP8.94□□□□□ -0.98
LINC00641-201ENST00000555379 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.94□□□□□ -0.98
LINC00641-201ENST00000555379 FANCLQ9NW38 375 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 BCL9O00512 1426 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 ZNF197O14709 1029 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 AKR1B1P15121 316 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 YWHABP31946 246 aaKnown RBP8.94□□□□□ -0.98
LINC00641-201ENST00000555379 GEMIN4P57678 1058 aaKnown RBP8.94□□□□□ -0.98
LINC00641-201ENST00000555379 YWHAGP61981 247 aaKnown RBP eCLIP8.94□□□□□ -0.98
LINC00641-201ENST00000555379 TMCO4Q5TGY1 634 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 TBC1D10CQ8IV04 446 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 CCNYQ8ND76 341 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 GIPC2Q8TF65 315 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 EPSTI1Q96J88 318 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 LRRC37BQ96QE4 947 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 YIPF3Q9GZM5 350 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 KIAA1683Q9H0B3 1180 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 PARVAQ9NVD7 372 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 NDE1Q9NXR1 346 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 RBAKQ9NYW8 714 aaPredicted RBP8.94□□□□□ -0.98
LINC00641-201ENST00000555379 DDX41Q9UJV9 622 aaKnown RBP8.94□□□□□ -0.98
LINC00641-201ENST00000555379 PCDHB7Q9Y5E2 793 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 RASSF10A6NK89 507 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 ODC1P11926 461 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 UGP2Q16851 508 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 ITIH5Q86UX2 942 aa8.94□□□□□ -0.98
LINC00641-201ENST00000555379 MMTAG2Q9BU76 263 aaKnown RBP8.94□□□□□ -0.98
LINC00641-201ENST00000555379 NEDD4P46934 1319 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms