RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 CCDC127Q96BQ5 260 aa22.93■■□□□ 1.26
ARHGEF40-204ENST00000555038 RUFY1Q96T51 708 aa22.93■■□□□ 1.26
ARHGEF40-204ENST00000555038 POLR3FQ9H1D9 316 aaPredicted RBP22.93■■□□□ 1.26
ARHGEF40-204ENST00000555038 ZHX1Q9UKY1 873 aaPredicted RBP22.93■■□□□ 1.26
ARHGEF40-204ENST00000555038 NFU1Q9UMS0 254 aa22.93■■□□□ 1.26
ARHGEF40-204ENST00000555038 ADGRA3Q8IWK6 1321 aa22.93■■□□□ 1.26
ARHGEF40-204ENST00000555038 ZNF233A6NK53 670 aa22.92■■□□□ 1.26
ARHGEF40-204ENST00000555038 USP2O75604 605 aaPredicted RBP22.92■■□□□ 1.26
ARHGEF40-204ENST00000555038 RNASE9P60153 205 aaKnown RBP22.92■■□□□ 1.26
ARHGEF40-204ENST00000555038 GCNT1Q02742 428 aa22.92■■□□□ 1.26
ARHGEF40-204ENST00000555038 EMC2Q15006 297 aa22.92■■□□□ 1.26
ARHGEF40-204ENST00000555038 SEMA4DQ92854 862 aa22.92■■□□□ 1.26
ARHGEF40-204ENST00000555038 RPS6KC1Q96S38 1066 aa22.92■■□□□ 1.26
ARHGEF40-204ENST00000555038 ZNF302Q9NR11 478 aa22.92■■□□□ 1.26
ARHGEF40-204ENST00000555038 STYXL1Q9Y6J8 313 aa22.92■■□□□ 1.26
ARHGEF40-204ENST00000555038 SART1O43290 800 aaKnown RBP22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 EXTL3O43909 919 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 PHACTR2O75167 634 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 PIGRP01833 764 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 OATP04181 439 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 CLDN10P78369 228 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 RIOX2Q8IUF8 465 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 IFT81Q8WYA0 676 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 FZD1Q9UP38 647 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 SNCAIPQ9Y6H5 919 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 IGKV6D-21A0A0A0MT36 114 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 HSPA6P17066 643 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 CHRNB2P17787 502 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 POLGP54098 1239 aaPredicted RBP22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 HIRAP54198 1017 aaPredicted RBP22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 STRN3Q13033 797 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 PRPF4BQ13523 1007 aaKnown RBP22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 NOP9Q86U38 636 aaKnown RBP22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 ANKRD35Q8N283 1001 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 BICD1Q96G01 975 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 HINFPQ9BQA5 517 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 NIFKQ9BYG3 293 aaKnown RBP22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 DHX33Q9H6R0 707 aaKnown RBP22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 CALCOCO1Q9P1Z2 691 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 CTTNBP2NLQ9P2B4 639 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 COG5Q9UP83 839 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 PPME1Q9Y570 386 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 SYNGAP1Q96PV0 1343 aa22.91■■□□□ 1.26
ARHGEF40-204ENST00000555038 RPS6KA5O75582 802 aa22.9■■□□□ 1.26
ARHGEF40-204ENST00000555038 SGPL1O95470 568 aa22.9■■□□□ 1.26
ARHGEF40-204ENST00000555038 USP8P40818 1118 aa22.9■■□□□ 1.26
ARHGEF40-204ENST00000555038 RFC5P40937 340 aa22.9■■□□□ 1.26
ARHGEF40-204ENST00000555038 NAMPTP43490 491 aa22.9■■□□□ 1.26
ARHGEF40-204ENST00000555038 PDE6CP51160 858 aa22.9■■□□□ 1.26
ARHGEF40-204ENST00000555038 CDR2Q01850 454 aa22.9■■□□□ 1.26
ARHGEF40-204ENST00000555038 MTERF2Q49AM1 385 aa22.9■■□□□ 1.26
ARHGEF40-204ENST00000555038 SLFN12LQ6IEE8 588 aa22.9■■□□□ 1.26
ARHGEF40-204ENST00000555038 SV2AQ7L0J3 742 aa22.9■■□□□ 1.26
ARHGEF40-204ENST00000555038 UBL4BQ8N7F7 174 aa22.9■■□□□ 1.26
ARHGEF40-204ENST00000555038 KAT5Q92993 513 aa22.9■■□□□ 1.26
ARHGEF40-204ENST00000555038 PORCNQ9H237 461 aa22.9■■□□□ 1.26
ARHGEF40-204ENST00000555038 MYH9P35579 1960 aaKnown RBP22.9■■□□□ 1.26
ARHGEF40-204ENST00000555038 GOLGA6L10A0A0M3HER8 536 aa22.89■■□□□ 1.26
ARHGEF40-204ENST00000555038 ERICH4A6NGS2 130 aa22.89■■□□□ 1.26
ARHGEF40-204ENST00000555038 EDNRBP24530 442 aa22.89■■□□□ 1.26
ARHGEF40-204ENST00000555038 LIG4P49917 911 aa22.89■■□□□ 1.26
ARHGEF40-204ENST00000555038 ALDH5A1P51649 535 aaPredicted RBP22.89■■□□□ 1.26
ARHGEF40-204ENST00000555038 PSMD6Q15008 389 aa22.89■■□□□ 1.26
ARHGEF40-204ENST00000555038 C15orf39Q6ZRI6 1047 aa22.89■■□□□ 1.26
ARHGEF40-204ENST00000555038 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.89■■□□□ 1.26
ARHGEF40-204ENST00000555038 TAS1R3Q7RTX0 852 aa22.89■■□□□ 1.26
ARHGEF40-204ENST00000555038 CD302Q8IX05 232 aa22.89■■□□□ 1.26
ARHGEF40-204ENST00000555038 TSEN2Q8NCE0 465 aaKnown RBP22.89■■□□□ 1.26
ARHGEF40-204ENST00000555038 FAM76AQ8TAV0 307 aa22.89■■□□□ 1.26
ARHGEF40-204ENST00000555038 TAS1R2Q8TE23 839 aa22.89■■□□□ 1.26
ARHGEF40-204ENST00000555038 PKNOX2Q96KN3 472 aa22.89■■□□□ 1.26
ARHGEF40-204ENST00000555038 GTF3C4Q9UKN8 822 aa22.89■■□□□ 1.26
ARHGEF40-204ENST00000555038 GOLGA6CA6NDK9 693 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 CYP26A1O43174 497 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 GOLGA6DP0CG33 693 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 CYP11B1P15538 503 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 ACTN2P35609 894 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 HSPA9P38646 679 aaKnown RBP22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 SOX10P56693 466 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 ERVK-9P63128 1117 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 FMO1Q01740 532 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 SP4Q02446 784 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 VGLL4Q14135 290 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 CFAP58Q5T655 872 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 LEKR1Q6ZMV7 388 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 IQCKQ8N0W5 287 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 C1orf131Q8NDD1 294 aaKnown RBP22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 SEC14L1Q92503 715 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 DHX38Q92620 1227 aaKnown RBP22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 PCDHB18PQ96TA0 734 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 AP1M1Q9BXS5 423 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 GOLGA6AQ9NYA3 693 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 UVRAGQ9P2Y5 699 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 ALG6Q9Y672 507 aa22.89■■□□□ 1.25
ARHGEF40-204ENST00000555038 DOCK5Q9H7D0 1870 aa22.88■■□□□ 1.25
ARHGEF40-204ENST00000555038 SIP14410 1827 aa22.88■■□□□ 1.25
ARHGEF40-204ENST00000555038 PAPPA2Q9BXP8 1791 aa22.88■■□□□ 1.25
ARHGEF40-204ENST00000555038 PTPRFP10586 1907 aa22.88■■□□□ 1.25
ARHGEF40-204ENST00000555038 ESYT3A0FGR9 886 aa22.88■■□□□ 1.25
ARHGEF40-204ENST00000555038 ZSCAN5CA6NGD5 496 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms