RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 SCN5AQ14524 2016 aa6.49□□□□□ -1.37
ATXN3-230ENST00000554673 BRCA2P51587 3418 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 PTPRSQ13332 1948 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 ABLIM1O14639 778 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 TLR2O60603 784 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 HIP1RO75146 1068 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 PRPF6O94906 941 aaKnown RBP6.48□□□□□ -1.37
ATXN3-230ENST00000554673 LETM1O95202 739 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-230ENST00000554673 GJB1P08034 283 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 SUPT20HL2P0C7V6 817 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 CASP4P49662 377 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 ASIC1P78348 528 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 CLN3Q13286 438 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 SERINC3Q13530 473 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 BMS1Q14692 1282 aaKnown RBP6.48□□□□□ -1.37
ATXN3-230ENST00000554673 MTFR1Q15390 333 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 UVSSAQ2YD98 709 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 CELF3Q5SZQ8 465 aaKnown RBP6.48□□□□□ -1.37
ATXN3-230ENST00000554673 MCTP2Q6DN12 878 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 SASS6Q6UVJ0 657 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 LINC00114Q6XXX2 140 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 HS2ST1Q7LGA3 356 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 MIER3Q7Z3K6 550 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 CYP2U1Q7Z449 544 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 KRTAP1-3Q8IUG1 177 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 TPH2Q8IWU9 490 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 ANKRD35Q8N283 1001 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 GOLGA6L1Q8N7Z2 621 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 TRIML1Q8N9V2 468 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 GPRC5AQ8NFJ5 357 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 DNERQ8NFT8 737 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 CACTINQ8WUQ7 758 aaKnown RBP6.48□□□□□ -1.37
ATXN3-230ENST00000554673 TRIB2Q92519 343 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 KAT2BQ92831 832 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 C16orf70Q9BSU1 422 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 CXCL16Q9H2A7 254 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 RNPEPQ9H4A4 650 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 IFNKQ9P0W0 207 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 ADD3Q9UEY8 706 aaKnown RBP6.48□□□□□ -1.37
ATXN3-230ENST00000554673 DIS3Q9Y2L1 958 aaKnown RBP6.48□□□□□ -1.37
ATXN3-230ENST00000554673 NFE2L3Q9Y4A8 694 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 SYNRGQ9UMZ2 1314 aa6.48□□□□□ -1.37
ATXN3-230ENST00000554673 TET1Q8NFU7 2136 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 hCG_2014768A0A024R1R8 64 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 SCO2A0A1W2PP80 73 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 ANKRD63C9JTQ0 380 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 GNB5O14775 395 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 EIF3JO75822 258 aaKnown RBP6.47□□□□□ -1.37
ATXN3-230ENST00000554673 TOMM70O94826 608 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 GGPS1O95749 300 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 TBC1D8O95759 1140 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 SLC25A27O95847 323 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 PDGFAP04085 211 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 HOXC6P09630 235 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 XRCC5P13010 732 aaKnown RBP6.47□□□□□ -1.37
ATXN3-230ENST00000554673 GUCY2CP25092 1073 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 BRD2P25440 801 aaKnown RBP6.47□□□□□ -1.37
ATXN3-230ENST00000554673 ITGB7P26010 798 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 CYP2C19P33261 490 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 PSMA6P60900 246 aaKnown RBP6.47□□□□□ -1.37
ATXN3-230ENST00000554673 IGBP1P78318 339 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 CCZ1BP86790 482 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 CCZ1P86791 482 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-230ENST00000554673 SETQ01105 290 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-230ENST00000554673 PRKCEQ02156 737 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 PLCB4Q15147 1175 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 KRT31Q15323 416 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 TAF1CQ15572 869 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-230ENST00000554673 BMT2Q1RMZ1 405 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 MARCH8Q5T0T0 291 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 KRT79Q5XKE5 535 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 SWSAP1Q6NVH7 229 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 XRRA1Q6P2D8 792 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 SLC9A9Q8IVB4 645 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 C4orf19Q8IY42 314 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 WNT8BQ93098 351 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 ELMO3Q96BJ8 720 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 CAPNS2Q96L46 248 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 IWS1Q96ST2 819 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 CUEDC2Q9H467 287 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 MROH8Q9H579 483 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 RUBCNLQ9H714 662 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 METTL14Q9HCE5 456 aaKnown RBP6.47□□□□□ -1.37
ATXN3-230ENST00000554673 PANK4Q9NVE7 773 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 RNF186Q9NXI6 227 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 GABBR1Q9UBS5 961 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 MRPL42Q9Y6G3 142 aaKnown RBP6.47□□□□□ -1.37
ATXN3-230ENST00000554673 DNAH12Q6ZR08 3092 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 CITO14578 2027 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 SCN1AP35498 2009 aa6.47□□□□□ -1.37
ATXN3-230ENST00000554673 COL4A6Q14031 1691 aa6.46□□□□□ -1.37
ATXN3-230ENST00000554673 IGKV6-21A0A0C4DH24 114 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 A0A1B0GTH6 734 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 PVALEFA0A1B0GWK0 134 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 MANSC4A6NHS7 340 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-230ENST00000554673 SLC15A5A6NIM6 579 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 PIK3R2O00459 728 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 EIF1AYO14602 144 aaKnown RBP6.46□□□□□ -1.38
ATXN3-230ENST00000554673 ENPP3O14638 875 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 SLC26A4O43511 780 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms