RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 DMDP11532 3685 aa26.94■■□□□ 1.9
FOXA1-204ENST00000554607 CFHP08603 1231 aa26.93■■□□□ 1.9
FOXA1-204ENST00000554607 CYP4A11Q02928 519 aa26.93■■□□□ 1.9
FOXA1-204ENST00000554607 USP41Q3LFD5 358 aa26.93■■□□□ 1.9
FOXA1-204ENST00000554607 SLC44A3Q8N4M1 653 aa26.93■■□□□ 1.9
FOXA1-204ENST00000554607 RSAD2Q8WXG1 361 aa26.93■■□□□ 1.9
FOXA1-204ENST00000554607 CPB2Q96IY4 423 aa26.93■■□□□ 1.9
FOXA1-204ENST00000554607 ZFP42Q96MM3 310 aa26.93■■□□□ 1.9
FOXA1-204ENST00000554607 ZDHHC7Q9NXF8 308 aa26.93■■□□□ 1.9
FOXA1-204ENST00000554607 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.93■■□□□ 1.9
FOXA1-204ENST00000554607 STK36Q9NRP7 1315 aa26.92■■□□□ 1.9
FOXA1-204ENST00000554607 ZBTB39O15060 712 aa26.92■■□□□ 1.9
FOXA1-204ENST00000554607 RFPL2O75678 378 aa26.92■■□□□ 1.9
FOXA1-204ENST00000554607 SLITRK3O94933 977 aa26.92■■□□□ 1.9
FOXA1-204ENST00000554607 SRFP11831 508 aa26.92■■□□□ 1.9
FOXA1-204ENST00000554607 CREMQ03060 361 aa26.92■■□□□ 1.9
FOXA1-204ENST00000554607 SPIRE1Q08AE8 756 aa26.92■■□□□ 1.9
FOXA1-204ENST00000554607 PALB2Q86YC2 1186 aa26.92■■□□□ 1.9
FOXA1-204ENST00000554607 POTEDQ86YR6 584 aa26.92■■□□□ 1.9
FOXA1-204ENST00000554607 MYADMQ96S97 322 aa26.92■■□□□ 1.9
FOXA1-204ENST00000554607 APOL6Q9BWW8 343 aa26.92■■□□□ 1.9
FOXA1-204ENST00000554607 NT5C3AQ9H0P0 336 aa26.92■■□□□ 1.9
FOXA1-204ENST00000554607 SEMA4AQ9H3S1 761 aa26.92■■□□□ 1.9
FOXA1-204ENST00000554607 XPNPEP1Q9NQW7 623 aa26.92■■□□□ 1.9
FOXA1-204ENST00000554607 FNIP2Q9P278 1114 aa26.92■■□□□ 1.9
FOXA1-204ENST00000554607 DGAT1O75907 488 aa26.91■■□□□ 1.9
FOXA1-204ENST00000554607 SPATA31D3P0C874 917 aa26.91■■□□□ 1.9
FOXA1-204ENST00000554607 SPATA31D4Q6ZUB0 917 aa26.91■■□□□ 1.9
FOXA1-204ENST00000554607 ZNF707Q96C28 371 aaPredicted RBP26.91■■□□□ 1.9
FOXA1-204ENST00000554607 NFKBIZQ9BYH8 718 aa26.91■■□□□ 1.9
FOXA1-204ENST00000554607 ANKEF1Q9NU02 776 aa26.91■■□□□ 1.9
FOXA1-204ENST00000554607 ZMYM2Q9UBW7 1377 aa26.9■■□□□ 1.9
FOXA1-204ENST00000554607 KRBA1A5PL33 1030 aa26.9■■□□□ 1.9
FOXA1-204ENST00000554607 TGM5O43548 720 aa26.9■■□□□ 1.9
FOXA1-204ENST00000554607 LYPLA2O95372 231 aa26.9■■□□□ 1.9
FOXA1-204ENST00000554607 MYBP10242 640 aa26.9■■□□□ 1.9
FOXA1-204ENST00000554607 ARF4P18085 180 aaPredicted RBP26.9■■□□□ 1.9
FOXA1-204ENST00000554607 MBTD1Q05BQ5 628 aa26.9■■□□□ 1.9
FOXA1-204ENST00000554607 SCRN1Q12765 414 aa26.9■■□□□ 1.9
FOXA1-204ENST00000554607 FUT10Q6P4F1 479 aa26.9■■□□□ 1.9
FOXA1-204ENST00000554607 ERMP1Q7Z2K6 904 aa26.9■■□□□ 1.9
FOXA1-204ENST00000554607 OXER1Q8TDS5 423 aa26.9■■□□□ 1.9
FOXA1-204ENST00000554607 PRKD2Q9BZL6 878 aa26.9■■□□□ 1.9
FOXA1-204ENST00000554607 TDRD15B5MCY1 1934 aaKnown RBP26.9■■□□□ 1.9
FOXA1-204ENST00000554607 ARL2P36404 184 aa26.89■■□□□ 1.9
FOXA1-204ENST00000554607 CAPSQ13938 189 aa26.89■■□□□ 1.9
FOXA1-204ENST00000554607 AMHR2Q16671 573 aa26.89■■□□□ 1.9
FOXA1-204ENST00000554607 SLC27A1Q6PCB7 646 aa26.89■■□□□ 1.9
FOXA1-204ENST00000554607 WASF1Q92558 559 aa26.89■■□□□ 1.9
FOXA1-204ENST00000554607 CCDC43Q96MW1 224 aaKnown RBP26.89■■□□□ 1.9
FOXA1-204ENST00000554607 EIF2AK1Q9BQI3 630 aaKnown RBP26.89■■□□□ 1.9
FOXA1-204ENST00000554607 GPR62Q9BZJ7 368 aa26.89■■□□□ 1.9
FOXA1-204ENST00000554607 NXF3Q9H4D5 531 aaKnown RBP26.89■■□□□ 1.9
FOXA1-204ENST00000554607 ADAM28Q9UKQ2 775 aa26.89■■□□□ 1.9
FOXA1-204ENST00000554607 PCDHA12Q9UN75 941 aa26.89■■□□□ 1.9
FOXA1-204ENST00000554607 MTCL1Q9Y4B5 1905 aaKnown RBP26.88■■□□□ 1.89
FOXA1-204ENST00000554607 F8W810 466 aa26.88■■□□□ 1.89
FOXA1-204ENST00000554607 LAMP2P13473 410 aa26.88■■□□□ 1.89
FOXA1-204ENST00000554607 ID4P47928 161 aa26.88■■□□□ 1.89
FOXA1-204ENST00000554607 GRIK3Q13003 919 aa26.88■■□□□ 1.89
FOXA1-204ENST00000554607 PHLDB3Q6NSJ2 640 aa26.88■■□□□ 1.89
FOXA1-204ENST00000554607 LILRA6Q6PI73 481 aa26.88■■□□□ 1.89
FOXA1-204ENST00000554607 GSTCDQ8NEC7 633 aa26.88■■□□□ 1.89
FOXA1-204ENST00000554607 ASAP3Q8TDY4 903 aa26.88■■□□□ 1.89
FOXA1-204ENST00000554607 RIN2Q8WYP3 895 aaPredicted RBP26.88■■□□□ 1.89
FOXA1-204ENST00000554607 HSD17B14Q9BPX1 270 aa26.88■■□□□ 1.89
FOXA1-204ENST00000554607 TBC1D17Q9HA65 648 aa26.88■■□□□ 1.89
FOXA1-204ENST00000554607 CA14Q9ULX7 337 aa26.88■■□□□ 1.89
FOXA1-204ENST00000554607 ZFP37Q9Y6Q3 630 aaPredicted RBP26.88■■□□□ 1.89
FOXA1-204ENST00000554607 ARID2Q68CP9 1835 aa26.88■■□□□ 1.89
FOXA1-204ENST00000554607 TADA2AO75478 443 aa26.87■■□□□ 1.89
FOXA1-204ENST00000554607 AKAP5P24588 427 aa26.87■■□□□ 1.89
FOXA1-204ENST00000554607 KCNG4Q8TDN1 519 aa26.87■■□□□ 1.89
FOXA1-204ENST00000554607 B3GALT6Q96L58 329 aa26.87■■□□□ 1.89
FOXA1-204ENST00000554607 BRMS1Q9HCU9 246 aa26.87■■□□□ 1.89
FOXA1-204ENST00000554607 GJB4Q9NTQ9 266 aa26.87■■□□□ 1.89
FOXA1-204ENST00000554607 PARP2Q9UGN5 583 aa26.87■■□□□ 1.89
FOXA1-204ENST00000554607 A0A1B0GUA9 196 aa26.86■■□□□ 1.89
FOXA1-204ENST00000554607 GLRA2P23416 452 aa26.86■■□□□ 1.89
FOXA1-204ENST00000554607 GET4Q7L5D6 327 aaPredicted RBP26.86■■□□□ 1.89
FOXA1-204ENST00000554607 DOCK8Q8NF50 2099 aa26.85■■□□□ 1.89
FOXA1-204ENST00000554607 GVINP1Q7Z2Y8 2422 aa26.85■■□□□ 1.89
FOXA1-204ENST00000554607 ANHXE9PGG2 379 aa26.85■■□□□ 1.89
FOXA1-204ENST00000554607 PFKFB2O60825 505 aa26.85■■□□□ 1.89
FOXA1-204ENST00000554607 ZMYND10O75800 440 aa26.85■■□□□ 1.89
FOXA1-204ENST00000554607 NPTXRO95502 500 aa26.85■■□□□ 1.89
FOXA1-204ENST00000554607 LMNAP02545 664 aaKnown RBP26.85■■□□□ 1.89
FOXA1-204ENST00000554607 KRT2P35908 639 aa26.85■■□□□ 1.89
FOXA1-204ENST00000554607 EARS2Q5JPH6 523 aaKnown RBP26.85■■□□□ 1.89
FOXA1-204ENST00000554607 GLYCTKQ8IVS8 523 aa26.85■■□□□ 1.89
FOXA1-204ENST00000554607 GPR152Q8TDT2 470 aa26.85■■□□□ 1.89
FOXA1-204ENST00000554607 SLC2A4RGQ9NR83 387 aa26.85■■□□□ 1.89
FOXA1-204ENST00000554607 ORC3Q9UBD5 711 aaPredicted RBP26.85■■□□□ 1.89
FOXA1-204ENST00000554607 SIT1Q9Y3P8 196 aa26.85■■□□□ 1.89
FOXA1-204ENST00000554607 SF3B1O75533 1304 aaKnown RBP eCLIP26.85■■□□□ 1.89
FOXA1-204ENST00000554607 B4GALT5O43286 388 aa26.84■■□□□ 1.89
FOXA1-204ENST00000554607 XRCC6P12956 609 aaKnown RBP eCLIP26.84■■□□□ 1.89
FOXA1-204ENST00000554607 RARRES1P49788 294 aa26.84■■□□□ 1.89
FOXA1-204ENST00000554607 HTR4Q13639 388 aa26.84■■□□□ 1.89
FOXA1-204ENST00000554607 HSP90AA2PQ14568 343 aaPredicted RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms