RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 SYCP3Q8IZU3 236 aa20.16■□□□□ 0.82
PSEN1-210ENST00000554131 ZSWIM2Q8NEG5 633 aa20.16■□□□□ 0.82
PSEN1-210ENST00000554131 TMEM174Q8WUU8 243 aa20.16■□□□□ 0.82
PSEN1-210ENST00000554131 RNPC3Q96LT9 517 aaKnown RBP20.16■□□□□ 0.82
PSEN1-210ENST00000554131 CBWD1Q9BRT8 395 aa20.16■□□□□ 0.82
PSEN1-210ENST00000554131 RC3H2Q9HBD1 1191 aaKnown RBP20.16■□□□□ 0.82
PSEN1-210ENST00000554131 AGPAT3Q9NRZ7 376 aa20.16■□□□□ 0.82
PSEN1-210ENST00000554131 TMEM161AQ9NX61 479 aa20.16■□□□□ 0.82
PSEN1-210ENST00000554131 ANKFY1Q9P2R3 1169 aa20.16■□□□□ 0.82
PSEN1-210ENST00000554131 HES2Q9Y543 173 aa20.16■□□□□ 0.82
PSEN1-210ENST00000554131 LAMA2P24043 3122 aaKnown RBP20.16■□□□□ 0.82
PSEN1-210ENST00000554131 FNDC1Q4ZHG4 1894 aaPredicted RBP20.16■□□□□ 0.82
PSEN1-210ENST00000554131 ZBBXA8MT70 800 aa20.15■□□□□ 0.82
PSEN1-210ENST00000554131 EOMESO95936 686 aa20.15■□□□□ 0.82
PSEN1-210ENST00000554131 AMHP03971 560 aa20.15■□□□□ 0.82
PSEN1-210ENST00000554131 TMEM132AQ24JP5 1023 aa20.15■□□□□ 0.82
PSEN1-210ENST00000554131 ZBTB41Q5SVQ8 909 aa20.15■□□□□ 0.82
PSEN1-210ENST00000554131 CENPPQ6IPU0 288 aa20.15■□□□□ 0.82
PSEN1-210ENST00000554131 NPAS4Q8IUM7 802 aa20.15■□□□□ 0.82
PSEN1-210ENST00000554131 C12orf56Q8IXR9 622 aa20.15■□□□□ 0.82
PSEN1-210ENST00000554131 TMEM192Q8IY95 271 aa20.15■□□□□ 0.82
PSEN1-210ENST00000554131 LPPQ93052 612 aa20.15■□□□□ 0.82
PSEN1-210ENST00000554131 ADPGKQ9BRR6 497 aa20.15■□□□□ 0.82
PSEN1-210ENST00000554131 TYW1Q9NV66 732 aaKnown RBP20.15■□□□□ 0.82
PSEN1-210ENST00000554131 TRAF3IP3Q9Y228 551 aa20.15■□□□□ 0.82
PSEN1-210ENST00000554131 SLC4A7Q9Y6M7 1214 aa20.15■□□□□ 0.82
PSEN1-210ENST00000554131 GBF1Q92538 1859 aa20.15■□□□□ 0.82
PSEN1-210ENST00000554131 RALGAPA2Q2PPJ7 1873 aa20.14■□□□□ 0.81
PSEN1-210ENST00000554131 PDXKO00764 312 aa20.14■□□□□ 0.81
PSEN1-210ENST00000554131 SKIP12755 728 aa20.14■□□□□ 0.81
PSEN1-210ENST00000554131 GARTP22102 1010 aa20.14■□□□□ 0.81
PSEN1-210ENST00000554131 GRM5P41594 1212 aa20.14■□□□□ 0.81
PSEN1-210ENST00000554131 KCNJ6P48051 423 aa20.14■□□□□ 0.81
PSEN1-210ENST00000554131 PMS1P54277 932 aaKnown RBP20.14■□□□□ 0.81
PSEN1-210ENST00000554131 NLRP12P59046 1061 aa20.14■□□□□ 0.81
PSEN1-210ENST00000554131 SNRPFP62306 86 aaKnown RBP20.14■□□□□ 0.81
PSEN1-210ENST00000554131 DPCR1Q3MIW9 517 aa20.14■□□□□ 0.81
PSEN1-210ENST00000554131 FAM109BQ6ICB4 259 aaPredicted RBP20.14■□□□□ 0.81
PSEN1-210ENST00000554131 SLFN12LQ6IEE8 588 aa20.14■□□□□ 0.81
PSEN1-210ENST00000554131 CRELD2Q6UXH1 353 aaPredicted RBP20.14■□□□□ 0.81
PSEN1-210ENST00000554131 TDHQ8IZJ6 230 aa20.14■□□□□ 0.81
PSEN1-210ENST00000554131 PHOSPHO2Q8TCD6 241 aa20.14■□□□□ 0.81
PSEN1-210ENST00000554131 MED15Q96RN5 788 aa20.14■□□□□ 0.81
PSEN1-210ENST00000554131 SLC9A7Q96T83 725 aa20.14■□□□□ 0.81
PSEN1-210ENST00000554131 MTIF3Q9H2K0 278 aaKnown RBP20.14■□□□□ 0.81
PSEN1-210ENST00000554131 DMAC2Q9NW81 257 aa20.14■□□□□ 0.81
PSEN1-210ENST00000554131 ANK1P16157 1881 aa20.13■□□□□ 0.81
PSEN1-210ENST00000554131 OGTO15294 1046 aa20.13■□□□□ 0.81
PSEN1-210ENST00000554131 DGKIO75912 1065 aa20.13■□□□□ 0.81
PSEN1-210ENST00000554131 KIF20AO95235 890 aa20.13■□□□□ 0.81
PSEN1-210ENST00000554131 NFIL3Q16649 462 aa20.13■□□□□ 0.81
PSEN1-210ENST00000554131 SEZ6Q53EL9 994 aa20.13■□□□□ 0.81
PSEN1-210ENST00000554131 CLLU1OSQ5K130 101 aa20.13■□□□□ 0.81
PSEN1-210ENST00000554131 PRPF38BQ5VTL8 546 aaKnown RBP20.13■□□□□ 0.81
PSEN1-210ENST00000554131 HERC6Q8IVU3 1022 aa20.13■□□□□ 0.81
PSEN1-210ENST00000554131 SYAP1Q96A49 352 aaPredicted RBP20.13■□□□□ 0.81
PSEN1-210ENST00000554131 ZNF689Q96CS4 500 aaPredicted RBP20.13■□□□□ 0.81
PSEN1-210ENST00000554131 TCHPQ9BT92 498 aa20.13■□□□□ 0.81
PSEN1-210ENST00000554131 MSTO1Q9BUK6 570 aa20.13■□□□□ 0.81
PSEN1-210ENST00000554131 CXCL16Q9H2A7 254 aa20.13■□□□□ 0.81
PSEN1-210ENST00000554131 SNTG2Q9NY99 539 aa20.13■□□□□ 0.81
PSEN1-210ENST00000554131 CGNQ9P2M7 1197 aaKnown RBP20.13■□□□□ 0.81
PSEN1-210ENST00000554131 CLIC2O15247 247 aa20.12■□□□□ 0.81
PSEN1-210ENST00000554131 INPPL1O15357 1258 aa20.12■□□□□ 0.81
PSEN1-210ENST00000554131 GJB5O95377 273 aa20.12■□□□□ 0.81
PSEN1-210ENST00000554131 FGFR1P11362 822 aa20.12■□□□□ 0.81
PSEN1-210ENST00000554131 HARSP12081 509 aaKnown RBP20.12■□□□□ 0.81
PSEN1-210ENST00000554131 ATP2A2P16615 1042 aaKnown RBP20.12■□□□□ 0.81
PSEN1-210ENST00000554131 TNFSF9P41273 254 aa20.12■□□□□ 0.81
PSEN1-210ENST00000554131 GATMP50440 423 aa20.12■□□□□ 0.81
PSEN1-210ENST00000554131 AFF1P51825 1210 aaKnown RBP20.12■□□□□ 0.81
PSEN1-210ENST00000554131 HTRA4P83105 476 aaPredicted RBP20.12■□□□□ 0.81
PSEN1-210ENST00000554131 SLC9A9Q8IVB4 645 aa20.12■□□□□ 0.81
PSEN1-210ENST00000554131 ZC3H3Q8IXZ2 948 aaKnown RBP20.12■□□□□ 0.81
PSEN1-210ENST00000554131 THNSL1Q8IYQ7 743 aa20.12■□□□□ 0.81
PSEN1-210ENST00000554131 GSTCDQ8NEC7 633 aa20.12■□□□□ 0.81
PSEN1-210ENST00000554131 POMGNT1Q8WZA1 660 aa20.12■□□□□ 0.81
PSEN1-210ENST00000554131 DHTKD1Q96HY7 919 aaPredicted RBP20.12■□□□□ 0.81
PSEN1-210ENST00000554131 FBXL18Q96ME1 805 aa20.12■□□□□ 0.81
PSEN1-210ENST00000554131 FUCA2Q9BTY2 467 aa20.12■□□□□ 0.81
PSEN1-210ENST00000554131 TRIM6Q9C030 488 aaPredicted RBP20.12■□□□□ 0.81
PSEN1-210ENST00000554131 PCIF1Q9H4Z3 704 aa20.12■□□□□ 0.81
PSEN1-210ENST00000554131 HSPBP1Q9NZL4 362 aa20.12■□□□□ 0.81
PSEN1-210ENST00000554131 CPSF3Q9UKF6 684 aaKnown RBP20.12■□□□□ 0.81
PSEN1-210ENST00000554131 AGO2Q9UKV8 859 aaKnown RBP20.12■□□□□ 0.81
PSEN1-210ENST00000554131 PCDHB7Q9Y5E2 793 aa20.12■□□□□ 0.81
PSEN1-210ENST00000554131 PDCD11Q14690 1871 aaKnown RBP20.11■□□□□ 0.81
PSEN1-210ENST00000554131 TRIM49BA6NDI0 452 aa20.11■□□□□ 0.81
PSEN1-210ENST00000554131 OFD1O75665 1012 aa20.11■□□□□ 0.81
PSEN1-210ENST00000554131 RECQL4O94761 1208 aa20.11■□□□□ 0.81
PSEN1-210ENST00000554131 UPP2O95045 317 aa20.11■□□□□ 0.81
PSEN1-210ENST00000554131 ADRB2P07550 413 aa20.11■□□□□ 0.81
PSEN1-210ENST00000554131 STAG3L1P0CL83 205 aa20.11■□□□□ 0.81
PSEN1-210ENST00000554131 ITGA4P13612 1032 aa20.11■□□□□ 0.81
PSEN1-210ENST00000554131 AKAP5P24588 427 aa20.11■□□□□ 0.81
PSEN1-210ENST00000554131 CCNE1P24864 410 aa20.11■□□□□ 0.81
PSEN1-210ENST00000554131 PPP1R2P41236 205 aa20.11■□□□□ 0.81
PSEN1-210ENST00000554131 ANKRD40Q6AI12 368 aa20.11■□□□□ 0.81
PSEN1-210ENST00000554131 ARMCX5Q6P1M9 558 aa20.11■□□□□ 0.81
PSEN1-210ENST00000554131 ALKAL1Q6UXT8 129 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms