RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 RABGGTAQ92696 567 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 DYDC2Q96IM9 177 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 CPB2Q96IY4 423 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 FAM20AQ96MK3 541 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 JPH2Q9BR39 696 aaPredicted RBP12.89□□□□□ -0.35
TUBB3-204ENST00000554116 PAAF1Q9BRP4 392 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 LXNQ9BS40 222 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 PHF20Q9BVI0 1012 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 NT5C3AQ9H0P0 336 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 CXCL16Q9H2A7 254 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 FBXL21Q9UKT6 434 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 R4GN57 208 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 CHD8Q9HCK8 2581 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 POTEMA6NI47 508 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 SLITRK3O94933 977 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 GLUD1P00367 558 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 URODP06132 367 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 ITGA4P13612 1032 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 RPL17P18621 184 aaKnown RBP12.88□□□□□ -0.35
TUBB3-204ENST00000554116 YWHABP31946 246 aaKnown RBP12.88□□□□□ -0.35
TUBB3-204ENST00000554116 RFC5P40937 340 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 GLUD2P49448 558 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 MBTD1Q05BQ5 628 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 SCRN1Q12765 414 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 HTR4Q13639 388 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 CTTNQ14247 550 aaKnown RBP12.88□□□□□ -0.35
TUBB3-204ENST00000554116 PUM1Q14671 1186 aaKnown RBP eCLIP12.88□□□□□ -0.35
TUBB3-204ENST00000554116 ANKRD1Q15327 319 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 EPHA7Q15375 998 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 CYP26C1Q6V0L0 522 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 CDR2LQ86X02 465 aaPredicted RBP12.88□□□□□ -0.35
TUBB3-204ENST00000554116 PALB2Q86YC2 1186 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 GPR152Q8TDT2 470 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 ASAP3Q8TDY4 903 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 SMG7Q92540 1137 aaKnown RBP12.88□□□□□ -0.35
TUBB3-204ENST00000554116 FAM193BQ96PV7 902 aaPredicted RBP12.88□□□□□ -0.35
TUBB3-204ENST00000554116 CSRNP2Q9H175 543 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 SLKQ9H2G2 1235 aaPredicted RBP12.88□□□□□ -0.35
TUBB3-204ENST00000554116 NXF3Q9H4D5 531 aaKnown RBP12.88□□□□□ -0.35
TUBB3-204ENST00000554116 TBC1D17Q9HA65 648 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 STK39Q9UEW8 545 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 TPCN1Q9ULQ1 816 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 CA14Q9ULX7 337 aa12.88□□□□□ -0.35
TUBB3-204ENST00000554116 LAMA1P25391 3075 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 ACACBO00763 2458 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 CFAP47Q6ZTR5 3102 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 TTLL13PA6NNM8 815 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 WNT7AO00755 349 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 ASAP2O43150 1006 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 B4GALT5O43286 388 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 GAS2O43903 313 aaKnown RBP12.87□□□□□ -0.35
TUBB3-204ENST00000554116 LRRN2O75325 713 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 ADH1AP07327 375 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 DCNP07585 359 aaKnown RBP12.87□□□□□ -0.35
TUBB3-204ENST00000554116 SRFP11831 508 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 LAMP2P13473 410 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 ARF4P18085 180 aaPredicted RBP12.87□□□□□ -0.35
TUBB3-204ENST00000554116 IGFBP6P24592 240 aaPredicted RBP12.87□□□□□ -0.35
TUBB3-204ENST00000554116 GBP2P32456 591 aaPredicted RBP12.87□□□□□ -0.35
TUBB3-204ENST00000554116 ARL2P36404 184 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 CAPSQ13938 189 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 GALNT17Q6IS24 598 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 ZC3H14Q6PJT7 736 aaKnown RBP12.87□□□□□ -0.35
TUBB3-204ENST00000554116 POTEHQ6S545 545 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 KRT25Q7Z3Z0 450 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 POTEDQ86YR6 584 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 HDAC7Q8WUI4 952 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 RIN2Q8WYP3 895 aaPredicted RBP12.87□□□□□ -0.35
TUBB3-204ENST00000554116 TNFRSF25Q93038 417 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 PRKD2Q9BZL6 878 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 PPME1Q9Y570 386 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 TRIP11Q15643 1979 aa12.87□□□□□ -0.35
TUBB3-204ENST00000554116 MIA3Q5JRA6 1907 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 PATJQ8NI35 1801 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 A0A087WWV3 80 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 PFKFB2O60825 505 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 CDKL5O76039 1030 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 CTDNEP1O95476 244 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 C1RP00736 705 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 GLRA2P23416 452 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 AKAP5P24588 427 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 NTHL1P78549 312 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 CYP4A11Q02928 519 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 POU5F1BQ06416 359 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 NAB2Q15742 525 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 XKR9Q5GH70 373 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 RTP2Q5QGT7 225 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 PHLDB3Q6NSJ2 640 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 FUT10Q6P4F1 479 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 NEK8Q86SG6 692 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 GLYCTKQ8IVS8 523 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 GPR65Q8IYL9 337 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 KIAA2013Q8IYS2 634 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 FAM177A1Q8N128 213 aaPredicted RBP12.86□□□□□ -0.35
TUBB3-204ENST00000554116 CNNM3Q8NE01 707 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 FGF14Q92915 247 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 HSD17B14Q9BPX1 270 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 FOXQ1Q9C009 403 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 PLEKHA4Q9H4M7 779 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 UBN1Q9NPG3 1134 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms