RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 CD248Q9HCU0 757 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 STAP2Q9UGK3 403 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 FBXL7Q9UJT9 491 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 ZNF112Q9UJU3 913 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 TIMM13Q9Y5L4 95 aaPredicted RBP4□□□□□ -1.77
SLIRP-202ENST00000553981 PPP2R3BQ9Y5P8 575 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 FANCIQ9NVI1 1328 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 ANKRD18BA2A2Z9 1011 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 UNCXA6NJT0 531 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 GPR42O15529 346 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 CYP1A1P04798 512 aaPredicted RBP3.99□□□□□ -1.77
SLIRP-202ENST00000553981 NAT2P11245 290 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 CCL5P13501 91 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 GDF5P43026 501 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 PSMC4P43686 418 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 RFX5P48382 616 aaPredicted RBP3.99□□□□□ -1.77
SLIRP-202ENST00000553981 GTF2A2P52657 109 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 RBM5P52756 815 aaKnown RBP eCLIP3.99□□□□□ -1.77
SLIRP-202ENST00000553981 MLLT6P55198 1093 aaPredicted RBP3.99□□□□□ -1.77
SLIRP-202ENST00000553981 EXOSC9Q06265 439 aaKnown RBP3.99□□□□□ -1.77
SLIRP-202ENST00000553981 SHROOM1Q2M3G4 852 aaPredicted RBP3.99□□□□□ -1.77
SLIRP-202ENST00000553981 SLC4A8Q2Y0W8 1093 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 E4F1Q66K89 784 aaPredicted RBP3.99□□□□□ -1.77
SLIRP-202ENST00000553981 CRIP3Q6Q6R5 217 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 PLEKHH3Q7Z736 793 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 ARRDC4Q8NCT1 418 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 LINS1Q8NG48 757 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 CPLX3Q8WVH0 158 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 BTN2A2Q8WVV5 523 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 DIO2Q92813 273 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 PPP1R14AQ96A00 147 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 TMEM169Q96HH4 297 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 YTHDC1Q96MU7 727 aaKnown RBP3.99□□□□□ -1.77
SLIRP-202ENST00000553981 WRNIP1Q96S55 665 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 MPHOSPH8Q99549 860 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 YIPF4Q9BSR8 244 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 ANKRD2Q9GZV1 360 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 KLC2Q9H0B6 622 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 L2HGDHQ9H9P8 463 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 DDX4Q9NQI0 724 aaKnown RBP3.99□□□□□ -1.77
SLIRP-202ENST00000553981 SIPA1L1O43166 1804 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 RFX7Q2KHR2 1363 aa3.99□□□□□ -1.77
SLIRP-202ENST00000553981 TCRBV5S2A0A599 114 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 NPEPPSL1A6NEC2 478 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 DDTLA6NHG4 134 aaPredicted RBP3.98□□□□□ -1.77
SLIRP-202ENST00000553981 PDHXO00330 501 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 HGSO14964 777 aaPredicted RBP3.98□□□□□ -1.77
SLIRP-202ENST00000553981 TBX1O43435 398 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 SGPL1O95470 568 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 DDX58O95786 925 aaKnown RBP3.98□□□□□ -1.77
SLIRP-202ENST00000553981 SLPIP03973 132 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 GJB1P08034 283 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 VAMP1P23763 118 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 PRDX5P30044 214 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 HIBADHP31937 336 aaKnown RBP3.98□□□□□ -1.77
SLIRP-202ENST00000553981 ACVRL1P37023 503 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 HMGA2P52926 109 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 TCP10Q12799 353 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 CHAF1AQ13111 956 aaPredicted RBP3.98□□□□□ -1.77
SLIRP-202ENST00000553981 IFIT5Q13325 482 aaKnown RBP3.98□□□□□ -1.77
SLIRP-202ENST00000553981 PPIL2Q13356 520 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 UBE4AQ14139 1066 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 RABL6Q3YEC7 729 aaPredicted RBP3.98□□□□□ -1.77
SLIRP-202ENST00000553981 SUPT20HL1Q3ZLR7 823 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 TREML2Q5T2D2 321 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 CDC42EP5Q6NZY7 148 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 PKN3Q6P5Z2 889 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 LDHAL6AQ6ZMR3 332 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 ERO1BQ86YB8 467 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 KREMEN2Q8NCW0 462 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 DNERQ8NFT8 737 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 IGDCC4Q8TDY8 1250 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 U2AF1L4Q8WU68 220 aaKnown RBP3.98□□□□□ -1.77
SLIRP-202ENST00000553981 ZCCHC14Q8WYQ9 949 aaKnown RBP3.98□□□□□ -1.77
SLIRP-202ENST00000553981 TOE1Q96GM8 510 aaKnown RBP3.98□□□□□ -1.77
SLIRP-202ENST00000553981 GDF15Q99988 308 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 TMEM168Q9H0V1 697 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 BICC1Q9H694 974 aaKnown RBP3.98□□□□□ -1.77
SLIRP-202ENST00000553981 DTLQ9NZJ0 730 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 GJD2Q9UKL4 321 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 ZMYND8Q9ULU4 1186 aaPredicted RBP3.98□□□□□ -1.77
SLIRP-202ENST00000553981 WASF3Q9UPY6 502 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.98□□□□□ -1.77
SLIRP-202ENST00000553981 TRIOBPQ9H2D6 2365 aa3.98□□□□□ -1.77
SLIRP-202ENST00000553981 UTYO14607 1347 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 PFASO15067 1338 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 MYPNQ86TC9 1320 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 MYH13Q9UKX3 1938 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 GRM8O00222 908 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 CYR61O00622 381 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 MEFVO15553 781 aaPredicted RBP3.97□□□□□ -1.77
SLIRP-202ENST00000553981 MYO1BO43795 1136 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 TADA3O75528 432 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 LRG1P02750 347 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 ADORA1P30542 326 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 HOXC12P31275 282 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 ECI1P42126 302 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 KCNJ4P48050 445 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 FLT3LGP49771 235 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 MMP14P50281 582 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms