RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-222	ENST00000553570	GLIS2	Q9BZE0	524 aa	Predicted RBP	5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	BRINP2	Q9C0B6	783 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	MYOZ2	Q9NPC6	264 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	PCDH12	Q9NPG4	1184 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	ABCF2	Q9UG63	623 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	ABT1	Q9ULW3	272 aa	Known RBP	5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	PCDHA9	Q9Y5H5	950 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	PCDHA8	Q9Y5H6	950 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	SNED1	Q8TER0	1413 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570		A0A1B0GUL7	405 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	MYO1B	O43795	1136 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	IL1R1	P14778	569 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	STAT3	P40763	770 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	PHKA1	P46020	1223 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	ZNF460	Q14592	562 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	CFAP100	Q494V2	611 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	CCDC158	Q5M9N0	1113 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	DACT2	Q5SW24	774 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	PRAMEF18	Q5VWM3	479 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	CEP85	Q6P2H3	762 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	CNNM4	Q6P4Q7	775 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	LBX2	Q6XYB7	198 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	RNF180	Q86T96	592 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	AACS	Q86V21	672 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	ANKRD13A	Q8IZ07	590 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	IFNL3	Q8IZI9	196 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	TDRD7	Q8NHU6	1098 aa	Known RBP	5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	SSH3	Q8TE77	659 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	DDX1	Q92499	740 aa	Known RBP	5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	VEZT	Q9HBM0	779 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	RXFP1	Q9HBX9	757 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	IL1RAPL2	Q9NP60	686 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	NOP58	Q9Y2X3	529 aa	Known RBP	5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	ARAP2	Q8WZ64	1704 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	ASTN2	O75129	1339 aa	Predicted RBP	5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	MYO3B	Q8WXR4	1341 aa		5.67	□□□□□ -1.5
ATXN3-222	ENST00000553570	CLRN2	A0PK11	232 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	KRTAP9-7	A8MTY7	169 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	ADM5	C9JUS6	153 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	OPA1	O60313	960 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	NPHS1	O60500	1241 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	BUB1B	O60566	1050 aa	Predicted RBP	5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	CELF2	O95319	508 aa	Known RBP	5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	ASL	P04424	464 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	IFIT2	P09913	472 aa	Known RBP	5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	ATF2	P15336	505 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	POU3F3	P20264	500 aa	Predicted RBP	5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	FGFR2	P21802	821 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	GUCY1A3	Q02108	690 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	HSP90AB4P	Q58FF6	505 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	ABHD17C	Q6PCB6	329 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	C15orf52	Q6ZUT6	534 aa	Known RBP	5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	ERC1	Q8IUD2	1116 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570		Q8N1Y9	231 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	CERS5	Q8N5B7	392 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	UBR7	Q8N806	425 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	VGLL2	Q8N8G2	317 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	NETO2	Q8NC67	525 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	WDR66	Q8TBY9	1149 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	TBC1D22A	Q8WUA7	517 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	CHAC2	Q8WUX2	184 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	TSPAN17	Q96FV3	270 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	FAM126A	Q9BYI3	521 aa	Predicted RBP	5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	TDRD3	Q9H7E2	651 aa	Known RBP	5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	CAAP1	Q9H8G2	361 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	ZBTB40	Q9NUA8	1239 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	RAI14	Q9P0K7	980 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	FBXL7	Q9UJT9	491 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	DENND2A	Q9ULE3	1009 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	PCDHA2	Q9Y5H9	948 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	PCDHAC2	Q9Y5I4	1007 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	BAZ2A	Q9UIF9	1905 aa	Known RBP	5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	CASP8AP2	Q9UKL3	1982 aa		5.66	□□□□□ -1.5
ATXN3-222	ENST00000553570	hCG_2014768	A0A024R1R8	64 aa		5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570		A0A1W2PQJ5	194 aa		5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	TCP10L2	B9ZVM9	353 aa		5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	ARVCF	O00192	962 aa		5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	UQCRFS1P1	P0C7P4	283 aa		5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	POU3F2	P20265	443 aa	Predicted RBP	5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	IBSP	P21815	317 aa	Predicted RBP	5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	NF2	P35240	595 aa		5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	IGFALS	P35858	605 aa		5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	MTX1	Q13505	466 aa		5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	DEFB115	Q30KQ5	88 aa		5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	TTLL10	Q6ZVT0	673 aa		5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	MTDH	Q86UE4	582 aa	Known RBP	5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	DZIP1	Q86YF9	867 aa	Known RBP	5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	CLASRP	Q8N2M8	674 aa	Known RBP	5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	C2orf69	Q8N8R5	385 aa		5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	EXOC6	Q8TAG9	804 aa		5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	TEKT1	Q969V4	418 aa		5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	PRMT6	Q96LA8	375 aa	Predicted RBP	5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	NOL10	Q9BSC4	688 aa	Known RBP	5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	CDIP1	Q9H305	208 aa		5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	GGA3	Q9NZ52	723 aa		5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	MAPRE3	Q9UPY8	281 aa		5.65	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms