RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 CTCFP49711 727 aaPredicted RBP14.96□□□□□ -0.01
APEX1-205ENST00000553555 ACOT2P49753 483 aa14.96□□□□□ -0.01
APEX1-205ENST00000553555 MRPS6P82932 125 aaKnown RBP14.96□□□□□ -0.01
APEX1-205ENST00000553555 ENPEPQ07075 957 aa14.96□□□□□ -0.01
APEX1-205ENST00000553555 CYP24A1Q07973 514 aa14.96□□□□□ -0.01
APEX1-205ENST00000553555 KCNMA1Q12791 1236 aa14.96□□□□□ -0.01
APEX1-205ENST00000553555 SNX17Q15036 470 aa14.96□□□□□ -0.01
APEX1-205ENST00000553555 PCBP1Q15365 356 aaKnown RBP eCLIP14.96□□□□□ -0.01
APEX1-205ENST00000553555 TMEM132AQ24JP5 1023 aa14.96□□□□□ -0.01
APEX1-205ENST00000553555 ZBTB33Q86T24 672 aa14.96□□□□□ -0.01
APEX1-205ENST00000553555 TMC2Q8TDI7 906 aa14.96□□□□□ -0.01
APEX1-205ENST00000553555 PARD3BQ8TEW8 1205 aa14.96□□□□□ -0.01
APEX1-205ENST00000553555 WNT8BQ93098 351 aa14.96□□□□□ -0.01
APEX1-205ENST00000553555 STARD7Q9NQZ5 370 aa14.96□□□□□ -0.01
APEX1-205ENST00000553555 A0A0U1RQG5 324 aaPredicted RBP14.95□□□□□ -0.02
APEX1-205ENST00000553555 DNM1LO00429 736 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 OGTO15294 1046 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 FAM189A1O60320 539 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 ERLIN2O94905 339 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 TRIM49P0CI25 452 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 TRIM49CP0CI26 452 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 HSPA1AP0DMV8 641 aaKnown RBP14.95□□□□□ -0.02
APEX1-205ENST00000553555 HSPA1BP0DMV9 641 aaKnown RBP14.95□□□□□ -0.02
APEX1-205ENST00000553555 FGFR4P22455 802 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 KLK7P49862 253 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 DLG4P78352 724 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 RBL2Q08999 1139 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 PTK7Q13308 1070 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 NOLC1Q14978 699 aaKnown RBP eCLIP14.95□□□□□ -0.023e-7■□□□□ 9.3
APEX1-205ENST00000553555 PKN2Q16513 984 aaKnown RBP14.95□□□□□ -0.02
APEX1-205ENST00000553555 C1orf220Q5T0J3 134 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 PPFIBP1Q86W92 1011 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 CDR2LQ86X02 465 aaPredicted RBP14.95□□□□□ -0.02
APEX1-205ENST00000553555 CPB2Q96IY4 423 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 A0A1B0GUA9 196 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 GTPBP10A4D1E9 387 aaKnown RBP14.95□□□□□ -0.02
APEX1-205ENST00000553555 HARSP12081 509 aaKnown RBP14.95□□□□□ -0.02
APEX1-205ENST00000553555 FMO5P49326 533 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 TRIM14Q14142 442 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 ARID5BQ14865 1188 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 ZNF568Q3ZCX4 644 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 ZBTB41Q5SVQ8 909 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 CATSPER4Q7RTX7 472 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 TMEM40Q8WWA1 233 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 ZNF333Q96JL9 665 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 PCMTD1Q96MG8 357 aaPredicted RBP14.95□□□□□ -0.02
APEX1-205ENST00000553555 NUP58Q9BVL2 599 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 SEZ6LQ9BYH1 1024 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 CDT1Q9H211 546 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 PDZD7Q9H5P4 517 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 TRMT13Q9NUP7 481 aaKnown RBP14.95□□□□□ -0.02
APEX1-205ENST00000553555 TRPV2Q9Y5S1 764 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 CDY2AQ9Y6F7 541 aa14.95□□□□□ -0.02
APEX1-205ENST00000553555 M0QZ92 97 aa14.94□□□□□ -0.02
APEX1-205ENST00000553555 ARVCFO00192 962 aa14.94□□□□□ -0.02
APEX1-205ENST00000553555 GYPCP04921 128 aa14.94□□□□□ -0.02
APEX1-205ENST00000553555 MCF2P10911 925 aa14.94□□□□□ -0.02
APEX1-205ENST00000553555 HOXA11P31270 313 aaPredicted RBP14.94□□□□□ -0.02
APEX1-205ENST00000553555 PPP3CAQ08209 521 aa14.94□□□□□ -0.02
APEX1-205ENST00000553555 NCBP1Q09161 790 aaKnown RBP14.94□□□□□ -0.02
APEX1-205ENST00000553555 MGAT3Q09327 533 aa14.94□□□□□ -0.02
APEX1-205ENST00000553555 PSMD6Q15008 389 aa14.94□□□□□ -0.02
APEX1-205ENST00000553555 SEZ6Q53EL9 994 aa14.94□□□□□ -0.02
APEX1-205ENST00000553555 FIGNQ5HY92 759 aa14.94□□□□□ -0.02
APEX1-205ENST00000553555 USP37Q86T82 979 aa14.94□□□□□ -0.02
APEX1-205ENST00000553555 LRRC8AQ8IWT6 810 aa14.94□□□□□ -0.02
APEX1-205ENST00000553555 CACTINQ8WUQ7 758 aaKnown RBP14.94□□□□□ -0.02
APEX1-205ENST00000553555 CPLX3Q8WVH0 158 aa14.94□□□□□ -0.02
APEX1-205ENST00000553555 ZNF830Q96NB3 372 aaPredicted RBP14.94□□□□□ -0.02
APEX1-205ENST00000553555 CRACR2AQ9BSW2 395 aa14.94□□□□□ -0.02
APEX1-205ENST00000553555 MMRN2Q9H8L6 949 aa14.94□□□□□ -0.02
APEX1-205ENST00000553555 NOD1Q9Y239 953 aa14.94□□□□□ -0.02
APEX1-205ENST00000553555 DNAH12Q6ZR08 3092 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 LRRIQ3A6PVS8 624 aaPredicted RBP14.93□□□□□ -0.02
APEX1-205ENST00000553555 AKR1B15C9JRZ8 316 aaPredicted RBP14.93□□□□□ -0.02
APEX1-205ENST00000553555 RNF225M0QZC1 329 aaPredicted RBP14.93□□□□□ -0.02
APEX1-205ENST00000553555 STX10O60499 249 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 CHRNA1P02708 482 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 SFPQP23246 707 aaKnown RBP eCLIP14.93□□□□□ -0.02
APEX1-205ENST00000553555 AXLP30530 894 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 CASP14P31944 242 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 TNFSF9P41273 254 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 CDK7P50613 346 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 ADKP55263 362 aaKnown RBP14.93□□□□□ -0.02
APEX1-205ENST00000553555 GOLGA8FQ08AF8 430 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 GOLGA8DPQ0D2H9 430 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 TRIM71Q2Q1W2 868 aaKnown RBP14.93□□□□□ -0.02
APEX1-205ENST00000553555 CBWD6Q4V339 395 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 CBWD3Q5JTY5 395 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 CBWD5Q5RIA9 395 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 GBP6Q6ZN66 633 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 BRSK2Q8IWQ3 736 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 TC2NQ8N9U0 490 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 CCDC150Q8NCX0 1101 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 DHX38Q92620 1227 aaKnown RBP14.93□□□□□ -0.02
APEX1-205ENST00000553555 CCDC127Q96BQ5 260 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 ARMC5Q96C12 935 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 IQCDQ96DY2 449 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 TTYH3Q9C0H2 523 aa14.93□□□□□ -0.02
APEX1-205ENST00000553555 CRISPLD2Q9H0B8 497 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms