RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 ABLIM1O14639 778 aa20.26■□□□□ 0.83
CPSF2-202ENST00000553427 TOM1L1O75674 476 aa20.26■□□□□ 0.83
CPSF2-202ENST00000553427 PIGRP01833 764 aa20.26■□□□□ 0.83
CPSF2-202ENST00000553427 CMA1P23946 247 aa20.26■□□□□ 0.83
CPSF2-202ENST00000553427 MLH1P40692 756 aa20.26■□□□□ 0.83
CPSF2-202ENST00000553427 FAM178BQ8IXR5 827 aa20.26■□□□□ 0.83
CPSF2-202ENST00000553427 SLC39A11Q8N1S5 342 aa20.26■□□□□ 0.83
CPSF2-202ENST00000553427 DHX58Q96C10 678 aa20.26■□□□□ 0.83
CPSF2-202ENST00000553427 GAD1Q99259 594 aa20.26■□□□□ 0.83
CPSF2-202ENST00000553427 TARS2Q9BW92 718 aaKnown RBP20.26■□□□□ 0.83
CPSF2-202ENST00000553427 FAM237AA0A1B0GTK4 181 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 K7ENM7 598 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 FGF18O76093 207 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 MCF2P10911 925 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 AFF1P51825 1210 aaKnown RBP20.25■□□□□ 0.83
CPSF2-202ENST00000553427 BCAR1P56945 870 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 GTF2BQ00403 316 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 AMPD3Q01432 767 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 RNASELQ05823 741 aaKnown RBP20.25■□□□□ 0.83
CPSF2-202ENST00000553427 MPZL3Q6UWV2 235 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 DYMQ7RTS9 669 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 THNSL1Q8IYQ7 743 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 HVCN1Q96D96 273 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 CHAMP1Q96JM3 812 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 TMEM175Q9BSA9 504 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 CDT1Q9H211 546 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 ZHX3Q9H4I2 956 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 NRDE2Q9H7Z3 1164 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 ALG13Q9NP73 1137 aaKnown RBP20.25■□□□□ 0.83
CPSF2-202ENST00000553427 OLFML3Q9NRN5 406 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 SPG21Q9NZD8 308 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 KCNH3Q9ULD8 1083 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 TBX20Q9UMR3 447 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 REV3LO60673 3130 aa20.25■□□□□ 0.83
CPSF2-202ENST00000553427 A0A1W2PQ27 194 aa20.24■□□□□ 0.83
CPSF2-202ENST00000553427 A0A1W2PQ64 194 aa20.24■□□□□ 0.83
CPSF2-202ENST00000553427 A0A1W2PQD8 194 aa20.24■□□□□ 0.83
CPSF2-202ENST00000553427 POLR2DO15514 142 aaKnown RBP20.24■□□□□ 0.83
CPSF2-202ENST00000553427 RECQL4O94761 1208 aa20.24■□□□□ 0.83
CPSF2-202ENST00000553427 AKAP5P24588 427 aa20.24■□□□□ 0.83
CPSF2-202ENST00000553427 GRM5P41594 1212 aa20.24■□□□□ 0.83
CPSF2-202ENST00000553427 ALDH7A1P49419 539 aaKnown RBP20.24■□□□□ 0.83
CPSF2-202ENST00000553427 DSC1Q08554 894 aa20.24■□□□□ 0.83
CPSF2-202ENST00000553427 CAMK1Q14012 370 aa20.24■□□□□ 0.83
CPSF2-202ENST00000553427 ZNF568Q3ZCX4 644 aa20.24■□□□□ 0.83
CPSF2-202ENST00000553427 SFR1Q86XK3 245 aa20.24■□□□□ 0.83
CPSF2-202ENST00000553427 MAP4K3Q8IVH8 894 aa20.24■□□□□ 0.83
CPSF2-202ENST00000553427 GSTCDQ8NEC7 633 aa20.24■□□□□ 0.83
CPSF2-202ENST00000553427 ZFP42Q96MM3 310 aa20.24■□□□□ 0.83
CPSF2-202ENST00000553427 APOL6Q9BWW8 343 aa20.24■□□□□ 0.83
CPSF2-202ENST00000553427 TRIM9Q9C026 710 aa20.24■□□□□ 0.83
CPSF2-202ENST00000553427 HPSEQ9Y251 543 aa20.24■□□□□ 0.83
CPSF2-202ENST00000553427 ZC3H11AO75152 810 aaKnown RBP eCLIP20.23■□□□□ 0.83
CPSF2-202ENST00000553427 PPP1R37O75864 691 aa20.23■□□□□ 0.83
CPSF2-202ENST00000553427 GALTP07902 379 aa20.23■□□□□ 0.83
CPSF2-202ENST00000553427 DNAJB1P25685 340 aa20.23■□□□□ 0.83
CPSF2-202ENST00000553427 ANP32AP39687 249 aaKnown RBP20.23■□□□□ 0.83
CPSF2-202ENST00000553427 SCNN1GP51170 649 aa20.23■□□□□ 0.83
CPSF2-202ENST00000553427 MCL1Q07820 350 aa20.23■□□□□ 0.83
CPSF2-202ENST00000553427 GRIK3Q13003 919 aa20.23■□□□□ 0.83
CPSF2-202ENST00000553427 NOLC1Q14978 699 aaKnown RBP eCLIP20.23■□□□□ 0.83
CPSF2-202ENST00000553427 PDE12Q6L8Q7 609 aaKnown RBP20.23■□□□□ 0.83
CPSF2-202ENST00000553427 MICALL1Q8N3F8 863 aa20.23■□□□□ 0.83
CPSF2-202ENST00000553427 POF1BQ8WVV4 589 aa20.23■□□□□ 0.83
CPSF2-202ENST00000553427 MRPS27Q92552 414 aaKnown RBP20.23■□□□□ 0.83
CPSF2-202ENST00000553427 STRA6Q9BX79 667 aa20.23■□□□□ 0.83
CPSF2-202ENST00000553427 NSUN3Q9H649 340 aaKnown RBP20.23■□□□□ 0.83
CPSF2-202ENST00000553427 SNTG2Q9NY99 539 aa20.23■□□□□ 0.83
CPSF2-202ENST00000553427 PARP2Q9UGN5 583 aa20.23■□□□□ 0.83
CPSF2-202ENST00000553427 USP25Q9UHP3 1055 aa20.23■□□□□ 0.83
CPSF2-202ENST00000553427 SPTBN5Q9NRC6 3674 aaKnown RBP20.22■□□□□ 0.83
CPSF2-202ENST00000553427 B4GALT3O60512 393 aa20.22■□□□□ 0.83
CPSF2-202ENST00000553427 DDHD2O94830 711 aa20.22■□□□□ 0.83
CPSF2-202ENST00000553427 POMCP01189 267 aa20.22■□□□□ 0.83
CPSF2-202ENST00000553427 PFKFB1P16118 471 aa20.22■□□□□ 0.83
CPSF2-202ENST00000553427 KRT17Q04695 432 aa20.22■□□□□ 0.83
CPSF2-202ENST00000553427 ALCAMQ13740 583 aa20.22■□□□□ 0.83
CPSF2-202ENST00000553427 ZNF720Q7Z2F6 126 aa20.22■□□□□ 0.83
CPSF2-202ENST00000553427 ZNF280BQ86YH2 543 aa20.22■□□□□ 0.83
CPSF2-202ENST00000553427 CCDC65Q8IXS2 484 aa20.22■□□□□ 0.83
CPSF2-202ENST00000553427 FAM193BQ96PV7 902 aaPredicted RBP20.22■□□□□ 0.83
CPSF2-202ENST00000553427 RPS6KC1Q96S38 1066 aa20.22■□□□□ 0.83
CPSF2-202ENST00000553427 C7orf25Q9BPX7 421 aa20.22■□□□□ 0.83
CPSF2-202ENST00000553427 TLR9Q9NR96 1032 aa20.22■□□□□ 0.83
CPSF2-202ENST00000553427 STK39Q9UEW8 545 aa20.22■□□□□ 0.83
CPSF2-202ENST00000553427 SLFN14P0C7P3 912 aa20.21■□□□□ 0.83
CPSF2-202ENST00000553427 NMT1P30419 496 aaKnown RBP20.21■□□□□ 0.83
CPSF2-202ENST00000553427 PBX3P40426 434 aa20.21■□□□□ 0.83
CPSF2-202ENST00000553427 SLC11A1P49279 550 aa20.21■□□□□ 0.83
CPSF2-202ENST00000553427 COL19A1Q14993 1142 aa20.21■□□□□ 0.83
CPSF2-202ENST00000553427 CCDC85BQ15834 202 aaPredicted RBP20.21■□□□□ 0.83
CPSF2-202ENST00000553427 COLGALT2Q8IYK4 626 aa20.21■□□□□ 0.83
CPSF2-202ENST00000553427 BICD1Q96G01 975 aa20.21■□□□□ 0.83
CPSF2-202ENST00000553427 IGSF21Q96ID5 467 aa20.21■□□□□ 0.83
CPSF2-202ENST00000553427 CCDC94Q9BW85 323 aaPredicted RBP20.21■□□□□ 0.83
CPSF2-202ENST00000553427 TOPORSQ9NS56 1045 aaPredicted RBP20.21■□□□□ 0.83
CPSF2-202ENST00000553427 PANK4Q9NVE7 773 aa20.21■□□□□ 0.83
CPSF2-202ENST00000553427 MIOSQ9NXC5 875 aa20.21■□□□□ 0.83
CPSF2-202ENST00000553427 DNAJB4Q9UDY4 337 aa20.21■□□□□ 0.83
CPSF2-202ENST00000553427 PUF60Q9UHX1 559 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms