RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 HERC6Q8IVU3 1022 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 NELFCDQ8IXH7 590 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 TMEM192Q8IY95 271 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 TRIML1Q8N9V2 468 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 ZNF689Q96CS4 500 aaPredicted RBP16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 SLC9A7Q96T83 725 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 CBWD1Q9BRT8 395 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 CXCL16Q9H2A7 254 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 SEMA6BQ9H3T3 888 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 TMEM206Q9H813 350 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 SLC4A7Q9Y6M7 1214 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 FNDC1Q4ZHG4 1894 aaPredicted RBP16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 GBF1Q92538 1859 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 CDH23Q9H251 3354 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 A0A1W2PPC1 479 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 ZBBXA8MT70 800 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 BIN1O00499 593 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 DGKIO75912 1065 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 EOMESO95936 686 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 AMHP03971 560 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 PTMSP20962 102 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 LIG4P49917 911 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 GATMP50440 423 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 NCBP1Q09161 790 aaKnown RBP16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 NOLC1Q14978 699 aaKnown RBP eCLIP16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 ZNF568Q3ZCX4 644 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 ISM2Q6H9L7 571 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 CRELD2Q6UXH1 353 aaPredicted RBP16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 STXBP4Q6ZWJ1 553 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 C12orf56Q8IXR9 622 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 GSTCDQ8NEC7 633 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 LPPQ93052 612 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 CCDC47Q96A33 483 aaKnown RBP16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 MED15Q96RN5 788 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 GBP3Q9H0R5 595 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 AGPAT3Q9NRZ7 376 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 DMAC2Q9NW81 257 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 EXOC7Q9UPT5 735 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 MAPK8IP1Q9UQF2 711 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 SZT2Q5T011 3432 aa16.24■□□□□ 0.19
MTHFD1-204ENST00000553405 GRXCR1A8MXD5 290 aa16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 PDXKO00764 312 aa16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 CLDN3O15551 220 aa16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 ADRB2P07550 413 aa16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 LINC00271P0C7V0 271 aa16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 ATP2A2P16615 1042 aaKnown RBP16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 GARTP22102 1010 aa16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 GRM5P41594 1212 aa16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 KCNJ6P48051 423 aa16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 AFF1P51825 1210 aaKnown RBP16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 SNRPFP62306 86 aaKnown RBP16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 CENPPQ6IPU0 288 aa16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 CAVIN1Q6NZI2 390 aaKnown RBP16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 ALKAL1Q6UXT8 129 aa16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 ZBTB33Q86T24 672 aa16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 SP7Q8TDD2 431 aaPredicted RBP16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 BICD1Q96G01 975 aa16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 FBXL18Q96ME1 805 aa16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 GTPBP4Q9BZE4 634 aaKnown RBP16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 MTIF3Q9H2K0 278 aaKnown RBP16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 TYW1Q9NV66 732 aaKnown RBP16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 ANKFY1Q9P2R3 1169 aa16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 TRAF3IP3Q9Y228 551 aa16.23■□□□□ 0.19
MTHFD1-204ENST00000553405 OGTO15294 1046 aa16.22■□□□□ 0.19
MTHFD1-204ENST00000553405 OFD1O75665 1012 aa16.22■□□□□ 0.19
MTHFD1-204ENST00000553405 FGFR1P11362 822 aa16.22■□□□□ 0.19
MTHFD1-204ENST00000553405 SKIP12755 728 aa16.22■□□□□ 0.19
MTHFD1-204ENST00000553405 PMS1P54277 932 aaKnown RBP16.22■□□□□ 0.19
MTHFD1-204ENST00000553405 NFIL3Q16649 462 aa16.22■□□□□ 0.19
MTHFD1-204ENST00000553405 SEZ6Q53EL9 994 aa16.22■□□□□ 0.19
MTHFD1-204ENST00000553405 XKR4Q5GH76 650 aa16.22■□□□□ 0.19
MTHFD1-204ENST00000553405 ZC3H3Q8IXZ2 948 aaKnown RBP16.22■□□□□ 0.19
MTHFD1-204ENST00000553405 CASD1Q96PB1 797 aa16.22■□□□□ 0.19
MTHFD1-204ENST00000553405 ADPGKQ9BRR6 497 aa16.22■□□□□ 0.19
MTHFD1-204ENST00000553405 SNTG2Q9NY99 539 aa16.22■□□□□ 0.19
MTHFD1-204ENST00000553405 CPSF3Q9UKF6 684 aaKnown RBP16.22■□□□□ 0.19
MTHFD1-204ENST00000553405 ANK1P16157 1881 aa16.22■□□□□ 0.19
MTHFD1-204ENST00000553405 RALGAPA2Q2PPJ7 1873 aa16.22■□□□□ 0.19
MTHFD1-204ENST00000553405 TRANK1O15050 2925 aa16.22■□□□□ 0.19
MTHFD1-204ENST00000553405 RECQL4O94761 1208 aa16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 ARHGEF15O94989 841 aa16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 STAG3L1P0CL83 205 aa16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 AKAP5P24588 427 aa16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 TNFSF9P41273 254 aa16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 ENOX2Q16206 610 aaKnown RBP16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 DPCR1Q3MIW9 517 aa16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 SLFN12LQ6IEE8 588 aa16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 FOXR2Q6PJQ5 311 aa16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 SLC9A9Q8IVB4 645 aa16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 SYCP3Q8IZU3 236 aa16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 MSTO1Q9BUK6 570 aa16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 GZF1Q9H116 711 aaPredicted RBP16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 MIOSQ9NXC5 875 aa16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 CGNQ9P2M7 1197 aaKnown RBP16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 AGO2Q9UKV8 859 aaKnown RBP16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 GIT1Q9Y2X7 761 aa16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 PCDHB7Q9Y5E2 793 aa16.21■□□□□ 0.19
MTHFD1-204ENST00000553405 PDCD11Q14690 1871 aaKnown RBP16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 TRIP11Q15643 1979 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 LCHNA4D1U4 455 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms