RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ZNF568Q3ZCX4 644 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 NOMO2Q5JPE7 1267 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 EEF1DP3Q658K8 133 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 MPZL3Q6UWV2 235 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 ZPBP2Q6X784 338 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 CDR2LQ86X02 465 aaPredicted RBP12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 MAP4K3Q8IVH8 894 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 CCDC65Q8IXS2 484 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 FSIP1Q8NA03 581 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 URGCPQ8TCY9 931 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 MYLIPQ8WY64 445 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 P2RX5Q93086 422 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 CWH43Q9H720 699 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 PTPRHQ9HD43 1115 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 STXBP5LQ9Y2K9 1186 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 GIT1Q9Y2X7 761 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 MYO7AQ13402 2215 aa12.86□□□□□ -0.35
TRAFD1-209ENST00000552896 BRWD1Q9NSI6 2320 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 H3BNC9 293 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 ABLIM1O14639 778 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 HNRNPDLO14979 420 aaKnown RBP12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 LPXNO60711 386 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 OFD1O75665 1012 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 TOM1L1O75674 476 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 PPP1R37O75864 691 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 SLC34A2O95436 690 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 IDEP14735 1019 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 MLH1P40692 756 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 SYKP43405 635 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 NDUFA8P51970 172 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 ASIC1P78348 528 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 GTF2BQ00403 316 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 COASYQ13057 564 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 ALCAMQ13740 583 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 NOLC1Q14978 699 aaKnown RBP eCLIP12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 LONRF3Q496Y0 759 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 LRRC55Q6ZSA7 311 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 COLGALT1Q8NBJ5 622 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 STAMQ92783 540 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 C7orf25Q9BPX7 421 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 TARS2Q9BW92 718 aaKnown RBP12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 CDT1Q9H211 546 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 GOLPH3LQ9H4A5 285 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 AAASQ9NRG9 546 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 TYW1Q9NV66 732 aaKnown RBP12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 PANK4Q9NVE7 773 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 TBC1D13Q9NVG8 400 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 HCSTQ9UBK5 93 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 TBX20Q9UMR3 447 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 INPP5FQ9Y2H2 1132 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 USP20Q9Y2K6 914 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 HES2Q9Y543 173 aa12.85□□□□□ -0.35
TRAFD1-209ENST00000552896 ARL5CA6NH57 179 aa12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 MYL1P05976 194 aa12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 MCF2P10911 925 aa12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 POU3F3P20264 500 aaPredicted RBP12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 NMT1P30419 496 aaKnown RBP12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 PPM1AP35813 382 aa12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 ADGRE1Q14246 886 aa12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 SPOUT1Q5T280 376 aaKnown RBP12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 BICD1Q96G01 975 aa12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 APOL6Q9BWW8 343 aa12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 STRA6Q9BX79 667 aa12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 MRPL44Q9H9J2 332 aaKnown RBP12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 TSHZ2Q9NRE2 1034 aa12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 LMCD1Q9NZU5 365 aa12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 KANSL3Q9P2N6 904 aa12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 ANKFY1Q9P2R3 1169 aa12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 SERTAD1Q9UHV2 236 aa12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 PCDHB12Q9Y5F1 795 aa12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 VWA8A3KMH1 1905 aa12.84□□□□□ -0.35
TRAFD1-209ENST00000552896 GOLGA6L4A6NEF3 574 aa12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 GTPBP6O43824 516 aaPredicted RBP12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 RECQL4O94761 1208 aa12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 GRM5P41594 1212 aa12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 LIG4P49917 911 aa12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 RNASELQ05823 741 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 MCL1Q07820 350 aa12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 EHHADHQ08426 723 aa12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 GRIK3Q13003 919 aa12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 GPM6BQ13491 265 aa12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 HERC4Q5GLZ8 1057 aaPredicted RBP12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 L1TD1Q5T7N2 865 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 UNC13DQ70J99 1090 aa12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 ZNF720Q7Z2F6 126 aa12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 TMEM87AQ8NBN3 555 aa12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 ZNF558Q96NG5 402 aa12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 RPS6KC1Q96S38 1066 aa12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 GAD1Q99259 594 aa12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 LMAN2LQ9H0V9 348 aa12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 UBE4BO95155 1302 aa12.83□□□□□ -0.36
TRAFD1-209ENST00000552896 PVALEFA0A1B0GWK0 134 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 RFXAPO00287 272 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 CLDN3O15551 220 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 ZC3H11AO75152 810 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 GCNT3O95395 438 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 AKAP5P24588 427 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 AFMP43652 599 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 SCNN1GP51170 649 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 CASP5P51878 434 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms