RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 LINC01599Q8WXQ3 324 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 BSNDQ8WZ55 320 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 DNAJC19Q96DA6 116 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 UROC1Q96N76 676 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 ZNF558Q96NG5 402 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 ACAP3Q96P50 834 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 RC3H2Q9HBD1 1191 aaKnown RBP11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 IPPQ9Y573 584 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 A0A1B0GVL5 298 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 ARHGEF37A1IGU5 675 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 SFI1A8K8P3 1242 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 GRXCR1A8MXD5 290 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 H3BNC9 293 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 GCNT3O95395 438 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 NPTXRO95502 500 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 THP07101 528 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 GARTP22102 1010 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 CTNNB1P35222 781 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 GRM5P41594 1212 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 MCL1Q07820 350 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 GRIK3Q13003 919 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 EPC2Q52LR7 807 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 TIGD5Q53EQ6 642 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 FAM26FQ5R3K3 315 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 L1TD1Q5T7N2 865 aaKnown RBP11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 ELMSAN1Q6PJG2 1045 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 KRBA2Q6ZNG9 492 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 NT5DC4Q86YG4 428 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 DDX27Q96GQ7 796 aaKnown RBP11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 LRCH3Q96II8 777 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 CPB2Q96IY4 423 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 CASD1Q96PB1 797 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 GSDMAQ96QA5 445 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 COLEC11Q9BWP8 271 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 PDZD7Q9H5P4 517 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 NGRNQ9NPE2 291 aaKnown RBP11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 MTMR10Q9NXD2 777 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 SPG21Q9NZD8 308 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 PARP2Q9UGN5 583 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 YBX2Q9Y2T7 364 aaKnown RBP11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 SIP14410 1827 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 MYO9BQ13459 2157 aa11.23□□□□□ -0.61
TRAFD1-208ENST00000552890 SOX1O00570 391 aaPredicted RBP11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 OGTO15294 1046 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 TRAPPC3O43617 180 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 ACTN4O43707 911 aaKnown RBP11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 OFD1O75665 1012 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 PROZP22891 400 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 PBX2P40425 430 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 NDUFA8P51970 172 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 PLCB3Q01970 1234 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 CREMQ03060 361 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 ELAVL2Q12926 359 aaKnown RBP11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 STIM1Q13586 685 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 KCNB1Q14721 858 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 SURF1Q15526 300 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 TCTN1Q2MV58 587 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 UBXN11Q5T124 520 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 PDXDC1Q6P996 788 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 SFR1Q86XK3 245 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 GPR65Q8IYL9 337 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 THNSL1Q8IYQ7 743 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 HELQQ8TDG4 1101 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 ARNTL2Q8WYA1 636 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 PAGE5Q96GU1 130 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 TMEM169Q96HH4 297 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 OSBPL7Q9BZF2 842 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 GBP3Q9H0R5 595 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 TBC1D7Q9P0N9 293 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 DPP7Q9UHL4 492 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 SERTAD1Q9UHV2 236 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 STXBP5LQ9Y2K9 1186 aa11.22□□□□□ -0.61
TRAFD1-208ENST00000552890 NPHP3-ACAD11A0A0J9YXS1 232 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 ARL5CA6NH57 179 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 IL18RAPO95256 599 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 SRGAP2BP0DMP2 458 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 FGFR1P11362 822 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 FOSL2P15408 326 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 IBSPP21815 317 aaPredicted RBP11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 HOXD11P31277 338 aaPredicted RBP11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 RPL9P32969 192 aaKnown RBP11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 AFMP43652 599 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 COASYQ13057 564 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 GPM6BQ13491 265 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 MYBPC2Q14324 1141 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 LONRF3Q496Y0 759 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 NT5DC1Q5TFE4 455 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 KCNT2Q6UVM3 1135 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 POMGNT1Q8WZA1 660 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 MRPL38Q96DV4 380 aaKnown RBP11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 MSTO1Q9BUK6 570 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 KIFC3Q9BVG8 833 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 TARS2Q9BW92 718 aaKnown RBP11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 ASB7Q9H672 318 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 RPF1Q9H9Y2 349 aaKnown RBP11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 PTPRHQ9HD43 1115 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 TYW1Q9NV66 732 aaKnown RBP11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 ANKFY1Q9P2R3 1169 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 FAN1Q9Y2M0 1017 aa11.21□□□□□ -0.61
TRAFD1-208ENST00000552890 DERAQ9Y315 318 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms