RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 MYRIPQ8NFW9 859 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 SOCS4Q8WXH5 440 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 WNT2BQ93097 391 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 CBWD1Q9BRT8 395 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 SYT11Q9BT88 431 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 C2orf40Q9H1Z8 148 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 ZFYVE28Q9HCC9 887 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 PTPRHQ9HD43 1115 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 RRN3P2A6NIE6 340 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 CCDC169A6NNP5 214 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 HAS3O00219 553 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 ABLIM1O14639 778 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 FAM189A1O60320 539 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 ADRB2P07550 413 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 KRT13P13646 458 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 SLC9A1P19634 815 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 HOXC8P31273 242 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 AP3M2P53677 418 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 PTENP60484 403 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 ADAM17P78536 824 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 CETN1Q12798 172 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 MTF1Q14872 753 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 SNRNP35Q16560 246 aaKnown RBP10.68□□□□□ -0.7
TMEM116-216ENST00000552800 SLC9C1Q4G0N8 1177 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 GPD1LQ8N335 351 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 TXLNBQ8N3L3 684 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 RNF10Q8N5U6 811 aaKnown RBP10.68□□□□□ -0.7
TMEM116-216ENST00000552800 CCDC155Q8N6L0 562 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 ASAP3Q8TDY4 903 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 PRPF31Q8WWY3 499 aaKnown RBP10.68□□□□□ -0.7
TMEM116-216ENST00000552800 SH2D3AQ9BRG2 576 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 IKZF4Q9H2S9 585 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 RNPEPQ9H4A4 650 aa10.68□□□□□ -0.7
TMEM116-216ENST00000552800 FAM207AQ9NSI2 230 aaPredicted RBP10.68□□□□□ -0.7
TMEM116-216ENST00000552800 TRMT1Q9NXH9 659 aaKnown RBP10.68□□□□□ -0.7
TMEM116-216ENST00000552800 ZNF233A6NK53 670 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 TMEM88BA6NKF7 163 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 LRRC53A6NM62 1247 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 ACKR2O00590 384 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 ZNF263O14978 683 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 TOM1L1O75674 476 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 C22orf31O95567 290 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 LGALS2P05162 132 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 PRLRP16471 622 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 SMPD1P17405 629 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 TUBB4BP68371 445 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 MCL1Q07820 350 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 CYP24A1Q07973 514 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 PPP3CAQ08209 521 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 LAMTOR4Q0VGL1 99 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 CAPSQ13938 189 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 PSMD6Q15008 389 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 TCEAL1Q15170 157 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 TAF1CQ15572 869 aaPredicted RBP10.67□□□□□ -0.7
TMEM116-216ENST00000552800 CBWD6Q4V339 395 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 CBWD3Q5JTY5 395 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 CBWD5Q5RIA9 395 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 SFMBT2Q5VUG0 894 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 KRT39Q6A163 491 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 CRELD2Q6UXH1 353 aaPredicted RBP10.67□□□□□ -0.7
TMEM116-216ENST00000552800 TSHZ1Q6ZSZ6 1077 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 RRAGAQ7L523 313 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 MAEAQ7L5Y9 396 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 EEPD1Q7L9B9 569 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 CACNA2D4Q7Z3S7 1137 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 PLEKHO2Q8TD55 490 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 GLG1Q92896 1179 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 COPS5Q92905 334 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 CCDC42Q96M95 316 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 REPIN1Q9BWE0 567 aaKnown RBP10.67□□□□□ -0.7
TMEM116-216ENST00000552800 TMEM8AQ9HCN3 771 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 APEX2Q9UBZ4 518 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 INTUQ9ULD6 942 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 MGAMO43451 1857 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 EVPLQ92817 2033 aa10.67□□□□□ -0.7
TMEM116-216ENST00000552800 MBLAC1A4D2B0 266 aaPredicted RBP10.66□□□□□ -0.7
TMEM116-216ENST00000552800 H3BRB1 525 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 PES1O00541 588 aaKnown RBP10.66□□□□□ -0.7
TMEM116-216ENST00000552800 KPNA6O60684 536 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 RNF40O75150 1001 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 TOMM70O94826 608 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 F2P00734 622 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 C4BPAP04003 597 aaKnown RBP10.66□□□□□ -0.7
TMEM116-216ENST00000552800 MMP3P08254 477 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 CCDC172P0C7W6 258 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 INSRRP14616 1297 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 FERP16591 822 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 RGS2P41220 211 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 ADCYAP1R1P41586 468 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 VAV2P52735 878 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 POLR2FP61218 127 aaKnown RBP10.66□□□□□ -0.7
TMEM116-216ENST00000552800 STRN3Q13033 797 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 TFDP1Q14186 410 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 SURF1Q15526 300 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 SLC18A3Q16572 532 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 DGKDQ16760 1214 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 TMEM63BQ5T3F8 832 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 PHLDB3Q6NSJ2 640 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 ENOSF1Q7L5Y1 443 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 PARP9Q8IXQ6 854 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms