RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	FHOD1	Q9Y613	1164 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	ADGRG1	Q9Y653	693 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480		A0A087WZ62	844 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	SMIM35	A0A1B0GVV1	85 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	INO80B-WBP1	J3KQ70	363 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	ABLIM1	O14639	778 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	CLDN3	O15551	220 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	NDUFA10	O95299	355 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	GNRH1	P01148	92 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	VTN	P04004	478 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	RARB	P10826	455 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	PROZ	P22891	400 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	GPC3	P51654	580 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	NLRP11	P59045	1033 aa	Known RBP	13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	CDC42EP1	Q00587	391 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	MCL1	Q07820	350 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	TRIM32	Q13049	653 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	PRPF4B	Q13523	1007 aa	Known RBP	13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	PTPN14	Q15678	1187 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	ATF7IP2	Q5U623	682 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	KRT39	Q6A163	491 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	MPZL3	Q6UWV2	235 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	KIAA0319L	Q8IZA0	1049 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	LMO3	Q8TAP4	145 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	CCDC127	Q96BQ5	260 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	PRIMPOL	Q96LW4	560 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	C16orf45	Q96MC5	204 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	INO80B	Q9C086	356 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	TMEM117	Q9H0C3	514 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	MINDY3	Q9H8M7	445 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	SPC25	Q9HBM1	224 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	AIPL1	Q9NZN9	384 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	TNFSF13B	Q9Y275	285 aa		13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNB3-223	ENST00000552480	MYADML2	A6NDP7	307 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	TTLL13P	A6NNM8	815 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	EIF3CL	B5ME19	914 aa	Known RBP	13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	KIF2A	O00139	706 aa	Predicted RBP	13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	GPR25	O00155	361 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	OGT	O15294	1046 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	HMGCR	P04035	888 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	TUBB4A	P04350	444 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	SERPING1	P05155	500 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	C6orf222	P0C671	652 aa	Predicted RBP	13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	CYP2C9	P11712	490 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	HOXC8	P31273	242 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	JAM2	P57087	298 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	CHMP4BP1	P59074	171 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	CLDN10	P78369	228 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	ADAM17	P78536	824 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	RAPGEF1	Q13905	1077 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	ASIC2	Q16515	512 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	IQCE	Q6IPM2	695 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	SRGAP1	Q7Z6B7	1085 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	NLRP7	Q8WX94	980 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	VTI1A	Q96AJ9	217 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	ZNF668	Q96K58	619 aa	Predicted RBP	13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	SPAG5	Q96R06	1193 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	EIF3C	Q99613	913 aa	Known RBP	13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	MTG1	Q9BT17	334 aa	Predicted RBP	13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	PTPRH	Q9HD43	1115 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	SAGE1	Q9NXZ1	904 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	RBAK	Q9NYW8	714 aa	Predicted RBP	13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	ARHGAP20	Q9P2F6	1191 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	APEX2	Q9UBZ4	518 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	CNTNAP2	Q9UHC6	1331 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	COQ4	Q9Y3A0	265 aa		13.77	□□□□□ -0.21
CACNB3-223	ENST00000552480	SSU72P8	A0A1W2PR75	194 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	C17orf102	A2RUQ5	167 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	FAM189A1	O60320	539 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	GNAT1	P11488	350 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	TNNT1	P13805	278 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	PRKAR2A	P13861	404 aa	Known RBP	13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	ACOT2	P49753	483 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	KRT83	P78385	493 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	MAP2K1	Q02750	393 aa	Predicted RBP	13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	AMHR2	Q16671	573 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	TMEM132A	Q24JP5	1023 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	ZNF568	Q3ZCX4	644 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	SLC9C1	Q4G0N8	1177 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	HGSNAT	Q68CP4	663 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	ZBTB33	Q86T24	672 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	FMNL3	Q8IVF7	1028 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	BRSK2	Q8IWQ3	736 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	ACRBP	Q8NEB7	543 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	ERO1A	Q96HE7	468 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	CCDC42	Q96M95	316 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	SCLT1	Q96NL6	688 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	FNBP1	Q96RU3	617 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	CGRRF1	Q99675	332 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	TCHP	Q9BT92	498 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	STK33	Q9BYT3	514 aa		13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.76	□□□□□ -0.21
CACNB3-223	ENST00000552480	DNAJC12	Q9UKB3	198 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms