RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 LIN9Q5TKA1 542 aa14.06□□□□□ -0.16
SNRPF-204ENST00000552085 TANGO2Q6ICL3 276 aa14.06□□□□□ -0.16
SNRPF-204ENST00000552085 COLGALT2Q8IYK4 626 aa14.06□□□□□ -0.16
SNRPF-204ENST00000552085 GPR65Q8IYL9 337 aa14.06□□□□□ -0.16
SNRPF-204ENST00000552085 ING5Q8WYH8 240 aa14.06□□□□□ -0.16
SNRPF-204ENST00000552085 RRP36Q96EU6 259 aaKnown RBP14.06□□□□□ -0.16
SNRPF-204ENST00000552085 GCOM2Q9BZD3 368 aaPredicted RBP14.06□□□□□ -0.16
SNRPF-204ENST00000552085 BRD9Q9H8M2 597 aa14.06□□□□□ -0.16
SNRPF-204ENST00000552085 RSAD1Q9HA92 442 aa14.06□□□□□ -0.16
SNRPF-204ENST00000552085 KLK13Q9UKR3 277 aa14.06□□□□□ -0.16
SNRPF-204ENST00000552085 MAFBQ9Y5Q3 323 aaPredicted RBP14.06□□□□□ -0.16
SNRPF-204ENST00000552085 SMG1Q96Q15 3661 aaKnown RBP14.06□□□□□ -0.16
SNRPF-204ENST00000552085 NUP205Q92621 2012 aa14.05□□□□□ -0.16
SNRPF-204ENST00000552085 RPP40O75818 363 aaKnown RBP14.05□□□□□ -0.16
SNRPF-204ENST00000552085 CAPNS1P04632 268 aa14.05□□□□□ -0.16
SNRPF-204ENST00000552085 C8AP07357 584 aa14.05□□□□□ -0.16
SNRPF-204ENST00000552085 SFPQP23246 707 aaKnown RBP eCLIP14.05□□□□□ -0.16
SNRPF-204ENST00000552085 MFAP1P55081 439 aaKnown RBP14.05□□□□□ -0.16
SNRPF-204ENST00000552085 GRM2Q14416 872 aa14.05□□□□□ -0.16
SNRPF-204ENST00000552085 PABPC1LQ4VXU2 614 aaKnown RBP14.05□□□□□ -0.16
SNRPF-204ENST00000552085 IRF7Q92985 503 aa14.05□□□□□ -0.16
SNRPF-204ENST00000552085 MCRS1Q96EZ8 462 aa14.05□□□□□ -0.16
SNRPF-204ENST00000552085 HCFC1R1Q9NWW0 138 aa14.05□□□□□ -0.16
SNRPF-204ENST00000552085 GDE1Q9NZC3 331 aa14.05□□□□□ -0.16
SNRPF-204ENST00000552085 PCDHB2Q9Y5E7 798 aa14.05□□□□□ -0.16
SNRPF-204ENST00000552085 PIAS3Q9Y6X2 628 aa14.05□□□□□ -0.16
SNRPF-204ENST00000552085 CNTNAP2Q9UHC6 1331 aa14.05□□□□□ -0.16
SNRPF-204ENST00000552085 HOXC13P31276 330 aa14.04□□□□□ -0.16
SNRPF-204ENST00000552085 LRRC32Q14392 662 aa14.04□□□□□ -0.16
SNRPF-204ENST00000552085 USP41Q3LFD5 358 aa14.04□□□□□ -0.16
SNRPF-204ENST00000552085 CEP55Q53EZ4 464 aa14.04□□□□□ -0.16
SNRPF-204ENST00000552085 CYB5R4Q7L1T6 521 aa14.04□□□□□ -0.16
SNRPF-204ENST00000552085 TRMT61BQ9BVS5 477 aaKnown RBP14.04□□□□□ -0.16
SNRPF-204ENST00000552085 SPZ1Q9BXG8 430 aa14.04□□□□□ -0.16
SNRPF-204ENST00000552085 ZNF334Q9HCZ1 680 aaPredicted RBP14.04□□□□□ -0.16
SNRPF-204ENST00000552085 TRPV5Q9NQA5 729 aa14.04□□□□□ -0.16
SNRPF-204ENST00000552085 IGSF5Q9NSI5 407 aa14.04□□□□□ -0.16
SNRPF-204ENST00000552085 C2orf42Q9NWW7 574 aa14.04□□□□□ -0.16
SNRPF-204ENST00000552085 SEC63Q9UGP8 760 aaKnown RBP14.04□□□□□ -0.16
SNRPF-204ENST00000552085 F8W810 466 aa14.03□□□□□ -0.16
SNRPF-204ENST00000552085 SEC24BO95487 1268 aa14.03□□□□□ -0.16
SNRPF-204ENST00000552085 POU2F2P09086 479 aa14.03□□□□□ -0.16
SNRPF-204ENST00000552085 CCDC192P0DO97 292 aa14.03□□□□□ -0.16
SNRPF-204ENST00000552085 CCNE1P24864 410 aa14.03□□□□□ -0.16
SNRPF-204ENST00000552085 C19orf57Q0VDD7 668 aa14.03□□□□□ -0.16
SNRPF-204ENST00000552085 IMMTQ16891 758 aaKnown RBP14.03□□□□□ -0.16
SNRPF-204ENST00000552085 Q6ZS52 159 aa14.03□□□□□ -0.16
SNRPF-204ENST00000552085 MRPL10Q7Z7H8 261 aaKnown RBP14.03□□□□□ -0.16
SNRPF-204ENST00000552085 LURAP1LQ8IV03 231 aa14.03□□□□□ -0.16
SNRPF-204ENST00000552085 MAP4K3Q8IVH8 894 aa14.03□□□□□ -0.16
SNRPF-204ENST00000552085 FAM167AQ96KS9 214 aa14.03□□□□□ -0.16
SNRPF-204ENST00000552085 COLEC11Q9BWP8 271 aa14.03□□□□□ -0.16
SNRPF-204ENST00000552085 GPR62Q9BZJ7 368 aa14.03□□□□□ -0.16
SNRPF-204ENST00000552085 RBM12Q9NTZ6 932 aaKnown RBP14.03□□□□□ -0.16
SNRPF-204ENST00000552085 DNMT3BQ9UBC3 853 aaKnown RBP14.03□□□□□ -0.16
SNRPF-204ENST00000552085 MRPS23Q9Y3D9 190 aaKnown RBP14.03□□□□□ -0.16
SNRPF-204ENST00000552085 LAMA1P25391 3075 aa14.02□□□□□ -0.16
SNRPF-204ENST00000552085 MEIS1O00470 390 aa14.02□□□□□ -0.17
SNRPF-204ENST00000552085 FCARP24071 287 aa14.02□□□□□ -0.17
SNRPF-204ENST00000552085 CDC42EP1Q00587 391 aa14.02□□□□□ -0.17
SNRPF-204ENST00000552085 DSC1Q08554 894 aa14.02□□□□□ -0.17
SNRPF-204ENST00000552085 FUT10Q6P4F1 479 aa14.02□□□□□ -0.17
SNRPF-204ENST00000552085 ZC3H10Q96K80 434 aaKnown RBP14.02□□□□□ -0.17
SNRPF-204ENST00000552085 INO80BQ9C086 356 aaPredicted RBP14.02□□□□□ -0.17
SNRPF-204ENST00000552085 SENP2Q9HC62 589 aa14.02□□□□□ -0.17
SNRPF-204ENST00000552085 ZFP14Q9HCL3 533 aa14.02□□□□□ -0.17
SNRPF-204ENST00000552085 SHROOM3Q8TF72 1996 aa14.02□□□□□ -0.17
SNRPF-204ENST00000552085 A0A087WZ62 844 aa14.01□□□□□ -0.17
SNRPF-204ENST00000552085 LNP1A1A4G5 178 aa14.01□□□□□ -0.17
SNRPF-204ENST00000552085 PCNX2A6NKB5 2137 aa14.01□□□□□ -0.17
SNRPF-204ENST00000552085 DHX15O43143 795 aaKnown RBP14.01□□□□□ -0.17
SNRPF-204ENST00000552085 NR1I2O75469 434 aa14.01□□□□□ -0.17
SNRPF-204ENST00000552085 AKAP3O75969 853 aa14.01□□□□□ -0.17
SNRPF-204ENST00000552085 FGD1P98174 961 aa14.01□□□□□ -0.17
SNRPF-204ENST00000552085 PRSS55Q6UWB4 352 aaPredicted RBP14.01□□□□□ -0.17
SNRPF-204ENST00000552085 CATSPER4Q7RTX7 472 aa14.01□□□□□ -0.17
SNRPF-204ENST00000552085 DEFB124Q8NES8 71 aa14.01□□□□□ -0.17
SNRPF-204ENST00000552085 SLC7A14Q8TBB6 771 aa14.01□□□□□ -0.17
SNRPF-204ENST00000552085 FDXACB1Q9BRP7 624 aaPredicted RBP14.01□□□□□ -0.17
SNRPF-204ENST00000552085 MKNK1Q9BUB5 465 aa14.01□□□□□ -0.17
SNRPF-204ENST00000552085 TMEM9BQ9NQ34 198 aa14.01□□□□□ -0.17
SNRPF-204ENST00000552085 GABBR1Q9UBS5 961 aa14.01□□□□□ -0.17
SNRPF-204ENST00000552085 CCDC163A0A0D9SF12 145 aa14□□□□□ -0.17
SNRPF-204ENST00000552085 FAM221BA6H8Z2 402 aa14□□□□□ -0.17
SNRPF-204ENST00000552085 PSAPP07602 524 aa14□□□□□ -0.17
SNRPF-204ENST00000552085 SMARCA1P28370 1054 aa14□□□□□ -0.17
SNRPF-204ENST00000552085 GDI1P31150 447 aa14□□□□□ -0.17
SNRPF-204ENST00000552085 DRP2Q13474 957 aa14□□□□□ -0.17
SNRPF-204ENST00000552085 SLC5A9Q2M3M2 681 aa14□□□□□ -0.17
SNRPF-204ENST00000552085 DGKKQ5KSL6 1271 aa14□□□□□ -0.17
SNRPF-204ENST00000552085 NIPA1Q7RTP0 329 aa14□□□□□ -0.17
SNRPF-204ENST00000552085 CLSTN3Q9BQT9 956 aa14□□□□□ -0.17
SNRPF-204ENST00000552085 NRBP2Q9NSY0 501 aa14□□□□□ -0.17
SNRPF-204ENST00000552085 AGPAT5Q9NUQ2 364 aa14□□□□□ -0.17
SNRPF-204ENST00000552085 ZBTB47Q9UFB7 747 aaPredicted RBP14□□□□□ -0.17
SNRPF-204ENST00000552085 PCDHB15Q9Y5E8 787 aa14□□□□□ -0.17
SNRPF-204ENST00000552085 ASCC3Q8N3C0 2202 aaKnown RBP14□□□□□ -0.17
SNRPF-204ENST00000552085 VWA8A3KMH1 1905 aa14□□□□□ -0.17
SNRPF-204ENST00000552085 IFIT3O14879 490 aaKnown RBP13.99□□□□□ -0.17
SNRPF-204ENST00000552085 CAVIN2O95810 425 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms