RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 CHMP2AO43633 222 aa16.23■□□□□ 0.19
VPS29-209ENST00000551655 SPINK2P20155 84 aa16.23■□□□□ 0.19
VPS29-209ENST00000551655 MLH1P40692 756 aa16.23■□□□□ 0.19
VPS29-209ENST00000551655 SCNN1GP51170 649 aa16.23■□□□□ 0.19
VPS29-209ENST00000551655 NRLP54845 237 aa16.23■□□□□ 0.19
VPS29-209ENST00000551655 AP3B2Q13367 1082 aa16.23■□□□□ 0.19
VPS29-209ENST00000551655 AASDHQ4L235 1098 aaPredicted RBP16.23■□□□□ 0.19
VPS29-209ENST00000551655 GJA10Q969M2 543 aa16.23■□□□□ 0.19
VPS29-209ENST00000551655 MBOAT7Q96N66 472 aa16.23■□□□□ 0.19
VPS29-209ENST00000551655 GAD1Q99259 594 aa16.23■□□□□ 0.19
VPS29-209ENST00000551655 DISC1Q9NRI5 854 aa16.23■□□□□ 0.19
VPS29-209ENST00000551655 KANSL3Q9P2N6 904 aa16.23■□□□□ 0.19
VPS29-209ENST00000551655 SUCLA2Q9P2R7 463 aaPredicted RBP16.23■□□□□ 0.19
VPS29-209ENST00000551655 FBXW11Q9UKB1 542 aa16.23■□□□□ 0.19
VPS29-209ENST00000551655 GREB1Q4ZG55 1949 aa16.23■□□□□ 0.19
VPS29-209ENST00000551655 CNTNAP2Q9UHC6 1331 aa16.22■□□□□ 0.19
VPS29-209ENST00000551655 WDR64B1ANS9 1081 aa16.22■□□□□ 0.19
VPS29-209ENST00000551655 DSC1Q08554 894 aa16.22■□□□□ 0.19
VPS29-209ENST00000551655 HDAC1Q13547 482 aaPredicted RBP16.22■□□□□ 0.19
VPS29-209ENST00000551655 PRR16Q569H4 304 aa16.22■□□□□ 0.19
VPS29-209ENST00000551655 HEATR6Q6AI08 1181 aaKnown RBP16.22■□□□□ 0.19
VPS29-209ENST00000551655 FUT10Q6P4F1 479 aa16.22■□□□□ 0.19
VPS29-209ENST00000551655 CASC1Q6TDU7 716 aa16.22■□□□□ 0.19
VPS29-209ENST00000551655 MICU3Q86XE3 530 aa16.22■□□□□ 0.19
VPS29-209ENST00000551655 SMG8Q8ND04 991 aaKnown RBP16.22■□□□□ 0.19
VPS29-209ENST00000551655 MCRS1Q96EZ8 462 aa16.22■□□□□ 0.19
VPS29-209ENST00000551655 ZFP42Q96MM3 310 aa16.22■□□□□ 0.19
VPS29-209ENST00000551655 LRRC2Q9BYS8 371 aa16.22■□□□□ 0.19
VPS29-209ENST00000551655 MINDY3Q9H8M7 445 aa16.22■□□□□ 0.19
VPS29-209ENST00000551655 FNIP2Q9P278 1114 aa16.22■□□□□ 0.19
VPS29-209ENST00000551655 HES2Q9Y543 173 aa16.22■□□□□ 0.19
VPS29-209ENST00000551655 TICRRQ7Z2Z1 1910 aa16.21■□□□□ 0.19
VPS29-209ENST00000551655 ARL5CA6NH57 179 aa16.21■□□□□ 0.19
VPS29-209ENST00000551655 NRG2O14511 850 aaPredicted RBP16.21■□□□□ 0.19
VPS29-209ENST00000551655 C8AP07357 584 aa16.21■□□□□ 0.19
VPS29-209ENST00000551655 CALM1P0DP23 149 aa16.21■□□□□ 0.19
VPS29-209ENST00000551655 CALM2P0DP24 149 aa16.21■□□□□ 0.19
VPS29-209ENST00000551655 CALM3P0DP25 149 aa16.21■□□□□ 0.19
VPS29-209ENST00000551655 GAS6Q14393 721 aa16.21■□□□□ 0.19
VPS29-209ENST00000551655 GRM2Q14416 872 aa16.21■□□□□ 0.19
VPS29-209ENST00000551655 RTP2Q5QGT7 225 aa16.21■□□□□ 0.19
VPS29-209ENST00000551655 PPM1LQ5SGD2 360 aa16.21■□□□□ 0.19
VPS29-209ENST00000551655 ZNF410Q86VK4 478 aa16.21■□□□□ 0.19
VPS29-209ENST00000551655 FAM160A2Q8N612 972 aaPredicted RBP16.21■□□□□ 0.19
VPS29-209ENST00000551655 FANCBQ8NB91 859 aa16.21■□□□□ 0.19
VPS29-209ENST00000551655 LMAN1LQ9HAT1 526 aa16.21■□□□□ 0.19
VPS29-209ENST00000551655 IFT122Q9HBG6 1241 aa16.21■□□□□ 0.19
VPS29-209ENST00000551655 MRPS17Q9Y2R5 130 aaKnown RBP16.21■□□□□ 0.19
VPS29-209ENST00000551655 SDK1Q7Z5N4 2213 aa16.21■□□□□ 0.18
VPS29-209ENST00000551655 ITPR1Q14643 2758 aa16.2■□□□□ 0.18
VPS29-209ENST00000551655 IGKV6-21A0A0C4DH24 114 aa16.2■□□□□ 0.18
VPS29-209ENST00000551655 ADAM12O43184 909 aa16.2■□□□□ 0.18
VPS29-209ENST00000551655 STBD1O95210 358 aa16.2■□□□□ 0.18
VPS29-209ENST00000551655 KCNK5O95279 499 aa16.2■□□□□ 0.18
VPS29-209ENST00000551655 TOP3BO95985 862 aaKnown RBP16.2■□□□□ 0.18
VPS29-209ENST00000551655 CYP3A4P08684 503 aa16.2■□□□□ 0.18
VPS29-209ENST00000551655 HOXA11P31270 313 aaPredicted RBP16.2■□□□□ 0.18
VPS29-209ENST00000551655 USP41Q3LFD5 358 aa16.2■□□□□ 0.18
VPS29-209ENST00000551655 LIN9Q5TKA1 542 aa16.2■□□□□ 0.18
VPS29-209ENST00000551655 TANGO2Q6ICL3 276 aa16.2■□□□□ 0.18
VPS29-209ENST00000551655 PPP1R18Q6NYC8 613 aa16.2■□□□□ 0.18
VPS29-209ENST00000551655 LENG9Q96B70 501 aa16.2■□□□□ 0.18
VPS29-209ENST00000551655 APOL6Q9BWW8 343 aa16.2■□□□□ 0.18
VPS29-209ENST00000551655 EIF2AQ9BY44 585 aaKnown RBP16.2■□□□□ 0.18
VPS29-209ENST00000551655 INO80BQ9C086 356 aaPredicted RBP16.2■□□□□ 0.18
VPS29-209ENST00000551655 SMOC1Q9H4F8 434 aa16.2■□□□□ 0.18
VPS29-209ENST00000551655 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.2■□□□□ 0.18
VPS29-209ENST00000551655 DNMT3BQ9UBC3 853 aaKnown RBP16.2■□□□□ 0.18
VPS29-209ENST00000551655 F5P12259 2224 aa16.2■□□□□ 0.18
VPS29-209ENST00000551655 SOBPA7XYQ1 873 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 AXIN1O15169 862 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 ZIC2O95409 532 aaPredicted RBP16.19■□□□□ 0.18
VPS29-209ENST00000551655 C1RP00736 705 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 HNRNPA1P09651 372 aaKnown RBP eCLIP16.19■□□□□ 0.18
VPS29-209ENST00000551655 ITGA4P13612 1032 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 CCR3P51677 355 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 SETQ01105 290 aaPredicted RBP16.19■□□□□ 0.18
VPS29-209ENST00000551655 RING1Q06587 406 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 SLC5A9Q2M3M2 681 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 STPG1Q5TH74 334 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 PSAPL1Q6NUJ1 521 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 CHD1LQ86WJ1 897 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 KDF1Q8NAX2 398 aaPredicted RBP16.19■□□□□ 0.18
VPS29-209ENST00000551655 SLC7A14Q8TBB6 771 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 HASPINQ8TF76 798 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 CLSTN3Q9BQT9 956 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 TMEM121BQ9BXQ6 578 aaPredicted RBP16.19■□□□□ 0.18
VPS29-209ENST00000551655 ARRDC1-AS1Q9H2J1 176 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 UNC45AQ9H3U1 944 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 C2orf42Q9NWW7 574 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 IPPQ9Y573 584 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 SLC12A7Q9Y666 1083 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 V9GY48 417 aaPredicted RBP16.19■□□□□ 0.18
VPS29-209ENST00000551655 DMXL2Q8TDJ6 3036 aa16.19■□□□□ 0.18
VPS29-209ENST00000551655 SRRM3A6NNA2 597 aaPredicted RBP16.18■□□□□ 0.18
VPS29-209ENST00000551655 GIPC1O14908 333 aa16.18■□□□□ 0.18
VPS29-209ENST00000551655 ECI2O75521 394 aa16.18■□□□□ 0.18
VPS29-209ENST00000551655 CXCL12P48061 93 aa16.18■□□□□ 0.18
VPS29-209ENST00000551655 DNM2P50570 870 aa16.18■□□□□ 0.18
VPS29-209ENST00000551655 LIMK1P53667 647 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms