RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 FTCDO95954 541 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 RHOXF2BP0C7M4 288 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 MARK3P27448 753 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 GTF2A2P52657 109 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 GALCP54803 685 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 NLRP11P59045 1033 aaKnown RBP12.45□□□□□ -0.42
RAB5C-208ENST00000551338 STRN3Q13033 797 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
RAB5C-208ENST00000551338 BRD3Q15059 726 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 CRELD2Q6UXH1 353 aaPredicted RBP12.45□□□□□ -0.42
RAB5C-208ENST00000551338 PLPPR4Q7Z2D5 763 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 PALB2Q86YC2 1186 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 DHX37Q8IY37 1157 aaKnown RBP12.45□□□□□ -0.42
RAB5C-208ENST00000551338 LRRC57Q8N9N7 239 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 FBXL13Q8NEE6 735 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 GPRC5AQ8NFJ5 357 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 TPCN2Q8NHX9 752 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 SHC3Q92529 594 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 ZNF516Q92618 1163 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 ZBTB45Q96K62 511 aaPredicted RBP12.45□□□□□ -0.42
RAB5C-208ENST00000551338 FAM84AQ96KN4 292 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 SPATA33Q96N06 139 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 NT5C1BQ96P26 610 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 AGPAT1Q99943 283 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 RHOXF2Q9BQY4 288 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 FAM213AQ9BRX8 229 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 CCDC113Q9H0I3 377 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 AZI2Q9H6S1 392 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 GBA2Q9HCG7 927 aaPredicted RBP12.45□□□□□ -0.42
RAB5C-208ENST00000551338 KIAA1586Q9HCI6 787 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 EHD2Q9NZN4 543 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 ADGRA2Q96PE1 1338 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 ZNF233A6NK53 670 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 K7ERI5 159 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 NOP56O00567 594 aaKnown RBP12.44□□□□□ -0.42
RAB5C-208ENST00000551338 GAS2O43903 313 aaKnown RBP12.44□□□□□ -0.42
RAB5C-208ENST00000551338 TMEM253P0C7T8 217 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 TXNP10599 105 aaKnown RBP12.44□□□□□ -0.42
RAB5C-208ENST00000551338 CHRNB2P17787 502 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 TNFAIP3P21580 790 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 FKBP1BP68106 108 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 CLDN10P78369 228 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 CCNA1P78396 465 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 ITIH3Q06033 890 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 ARHGAP1Q07960 439 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 MKRN3Q13064 507 aaKnown RBP12.44□□□□□ -0.42
RAB5C-208ENST00000551338 TTLL4Q14679 1199 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 IFI16Q16666 785 aaKnown RBP12.44□□□□□ -0.42
RAB5C-208ENST00000551338 ZBTB41Q5SVQ8 909 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 IER5Q5VY09 327 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 CDCA2Q69YH5 1023 aaPredicted RBP12.44□□□□□ -0.42
RAB5C-208ENST00000551338 SLFN12LQ6IEE8 588 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 TAPT1Q6NXT6 567 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 SV2AQ7L0J3 742 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 USP37Q86T82 979 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 FAM71AQ8IYT1 594 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 MMGT1Q8N4V1 131 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 SCFD2Q8WU76 684 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 GLG1Q92896 1179 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 PSMB7Q99436 277 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 KATNBL1Q9H079 304 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.44□□□□□ -0.42
RAB5C-208ENST00000551338 RNF216Q9NWF9 866 aaPredicted RBP12.44□□□□□ -0.42
RAB5C-208ENST00000551338 TAS2R14Q9NYV8 317 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 SMARCAL1Q9NZC9 954 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 NOCTQ9UK39 431 aaKnown RBP12.44□□□□□ -0.42
RAB5C-208ENST00000551338 AGO2Q9UKV8 859 aaKnown RBP12.44□□□□□ -0.42
RAB5C-208ENST00000551338 PDCD11Q14690 1871 aaKnown RBP12.44□□□□□ -0.42
RAB5C-208ENST00000551338 CITO14578 2027 aa12.44□□□□□ -0.42
RAB5C-208ENST00000551338 PTPRJQ12913 1337 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 A0A0B4J269 797 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 RBM47A0AV96 593 aaKnown RBP12.43□□□□□ -0.42
RAB5C-208ENST00000551338 SPDYE4A6NLX3 237 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 TTLL13PA6NNM8 815 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 KIF4AO95239 1232 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 SGPL1O95470 568 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 C4BPAP04003 597 aaKnown RBP12.43□□□□□ -0.42
RAB5C-208ENST00000551338 ZBTB48P10074 688 aaPredicted RBP12.43□□□□□ -0.42
RAB5C-208ENST00000551338 DLATP10515 647 aaKnown RBP12.43□□□□□ -0.42
RAB5C-208ENST00000551338 ADORA2AP29274 412 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 CXCR5P32302 372 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 GCLCP48506 637 aaPredicted RBP12.43□□□□□ -0.42
RAB5C-208ENST00000551338 VSNL1P62760 191 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 GJC2Q5T442 439 aaPredicted RBP12.43□□□□□ -0.42
RAB5C-208ENST00000551338 LMBRD2Q68DH5 695 aaPredicted RBP12.43□□□□□ -0.42
RAB5C-208ENST00000551338 MAMDC4Q6UXC1 1216 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 SLFN11Q7Z7L1 901 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 NOP9Q86U38 636 aaKnown RBP12.43□□□□□ -0.42
RAB5C-208ENST00000551338 PPM1KQ8N3J5 372 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 LRRC71Q8N4P6 559 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 EPS8L1Q8TE68 723 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 TRAPPC12Q8WVT3 735 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 TCP11Q8WWU5 503 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 RFFLQ8WZ73 363 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 TATDN2Q93075 761 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 ARHGEF26Q96DR7 871 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 CGRRF1Q99675 332 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 VTA1Q9NP79 307 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 RAB20Q9NX57 234 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 OGFRQ9NZT2 677 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms