RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 FZD8Q9H461 694 aa22.43■■□□□ 1.18
SLC48A1-208ENST00000551301 DDX19AQ9NUU7 478 aaKnown RBP22.43■■□□□ 1.18
SLC48A1-208ENST00000551301 ARIH1Q9Y4X5 557 aaPredicted RBP22.43■■□□□ 1.18
SLC48A1-208ENST00000551301 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.43■■□□□ 1.18
SLC48A1-208ENST00000551301 C5orf42Q9H799 3197 aa22.42■■□□□ 1.18
SLC48A1-208ENST00000551301 SOD2P04179 222 aa22.42■■□□□ 1.18
SLC48A1-208ENST00000551301 PRKCBP05771 671 aa22.42■■□□□ 1.18
SLC48A1-208ENST00000551301 LIG1P18858 919 aa22.42■■□□□ 1.18
SLC48A1-208ENST00000551301 AKAP5P24588 427 aa22.42■■□□□ 1.18
SLC48A1-208ENST00000551301 TOB1P50616 345 aaPredicted RBP22.42■■□□□ 1.18
SLC48A1-208ENST00000551301 PTPN14Q15678 1187 aa22.42■■□□□ 1.18
SLC48A1-208ENST00000551301 IGSF22Q8N9C0 903 aa22.42■■□□□ 1.18
SLC48A1-208ENST00000551301 DPP7Q9UHL4 492 aa22.42■■□□□ 1.18
SLC48A1-208ENST00000551301 RAPGEFL1Q9UHV5 662 aa22.42■■□□□ 1.18
SLC48A1-208ENST00000551301 SMC3Q9UQE7 1217 aa22.42■■□□□ 1.18
SLC48A1-208ENST00000551301 B4GALT3O60512 393 aa22.41■■□□□ 1.18
SLC48A1-208ENST00000551301 GJB2P29033 226 aa22.41■■□□□ 1.18
SLC48A1-208ENST00000551301 DSC1Q08554 894 aa22.41■■□□□ 1.18
SLC48A1-208ENST00000551301 GRIK3Q13003 919 aa22.41■■□□□ 1.18
SLC48A1-208ENST00000551301 ATAT1Q5SQI0 421 aa22.41■■□□□ 1.18
SLC48A1-208ENST00000551301 CDR2LQ86X02 465 aaPredicted RBP22.41■■□□□ 1.18
SLC48A1-208ENST00000551301 EDAQ92838 391 aa22.41■■□□□ 1.18
SLC48A1-208ENST00000551301 FAM122AQ96E09 287 aa22.41■■□□□ 1.18
SLC48A1-208ENST00000551301 TSHZ2Q9NRE2 1034 aa22.41■■□□□ 1.18
SLC48A1-208ENST00000551301 PHLPP2Q6ZVD8 1323 aa22.4■■□□□ 1.18
SLC48A1-208ENST00000551301 ACKR2O00590 384 aa22.4■■□□□ 1.18
SLC48A1-208ENST00000551301 GLUD2P49448 558 aa22.4■■□□□ 1.18
SLC48A1-208ENST00000551301 RARS2Q5T160 578 aaKnown RBP22.4■■□□□ 1.18
SLC48A1-208ENST00000551301 ZBTB33Q86T24 672 aa22.4■■□□□ 1.18
SLC48A1-208ENST00000551301 HERC2P3Q9BVR0 1158 aa22.4■■□□□ 1.18
SLC48A1-208ENST00000551301 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.4■■□□□ 1.18
SLC48A1-208ENST00000551301 C2CD2LO14523 706 aa22.39■■□□□ 1.17
SLC48A1-208ENST00000551301 ADH1AP07327 375 aa22.39■■□□□ 1.17
SLC48A1-208ENST00000551301 EPCAMP16422 314 aa22.39■■□□□ 1.17
SLC48A1-208ENST00000551301 SLC22A17Q8WUG5 538 aa22.39■■□□□ 1.17
SLC48A1-208ENST00000551301 BSNDQ8WZ55 320 aa22.39■■□□□ 1.17
SLC48A1-208ENST00000551301 DRC1Q96MC2 740 aa22.39■■□□□ 1.17
SLC48A1-208ENST00000551301 MFSD14AQ96MC6 490 aa22.39■■□□□ 1.17
SLC48A1-208ENST00000551301 KLHL5Q96PQ7 755 aa22.39■■□□□ 1.17
SLC48A1-208ENST00000551301 VN1R3Q9BXE9 311 aa22.39■■□□□ 1.17
SLC48A1-208ENST00000551301 SFXN1Q9H9B4 322 aa22.39■■□□□ 1.17
SLC48A1-208ENST00000551301 KLK14Q9P0G3 267 aa22.39■■□□□ 1.17
SLC48A1-208ENST00000551301 KCNG1Q9UIX4 513 aa22.39■■□□□ 1.17
SLC48A1-208ENST00000551301 TDRD15B5MCY1 1934 aaKnown RBP22.39■■□□□ 1.17
SLC48A1-208ENST00000551301 CCDC169A6NNP5 214 aa22.38■■□□□ 1.17
SLC48A1-208ENST00000551301 K7ERI5 159 aa22.38■■□□□ 1.17
SLC48A1-208ENST00000551301 CNPP09543 421 aaKnown RBP22.38■■□□□ 1.17
SLC48A1-208ENST00000551301 ZRSR1Q15695 479 aaKnown RBP22.38■■□□□ 1.17
SLC48A1-208ENST00000551301 ECM1Q16610 540 aa22.38■■□□□ 1.17
SLC48A1-208ENST00000551301 DCAF4L1Q3SXM0 396 aa22.38■■□□□ 1.17
SLC48A1-208ENST00000551301 KCTD17Q8N5Z5 321 aa22.38■■□□□ 1.17
SLC48A1-208ENST00000551301 CDK5RAP3Q96JB5 506 aa22.38■■□□□ 1.17
SLC48A1-208ENST00000551301 FBXL18Q96ME1 805 aa22.38■■□□□ 1.17
SLC48A1-208ENST00000551301 PDZD7Q9H5P4 517 aa22.38■■□□□ 1.17
SLC48A1-208ENST00000551301 MIOSQ9NXC5 875 aa22.38■■□□□ 1.17
SLC48A1-208ENST00000551301 TADA2AO75478 443 aa22.37■■□□□ 1.17
SLC48A1-208ENST00000551301 CREMQ03060 361 aa22.37■■□□□ 1.17
SLC48A1-208ENST00000551301 DMP1Q13316 513 aaPredicted RBP22.37■■□□□ 1.17
SLC48A1-208ENST00000551301 TBC1D32Q96NH3 1257 aa22.37■■□□□ 1.17
SLC48A1-208ENST00000551301 TIPINQ9BVW5 301 aa22.37■■□□□ 1.17
SLC48A1-208ENST00000551301 CCDC113Q9H0I3 377 aa22.37■■□□□ 1.17
SLC48A1-208ENST00000551301 NT5C3AQ9H0P0 336 aa22.37■■□□□ 1.17
SLC48A1-208ENST00000551301 MARCH5Q9NX47 278 aa22.37■■□□□ 1.17
SLC48A1-208ENST00000551301 THP07101 528 aa22.36■■□□□ 1.17
SLC48A1-208ENST00000551301 PLA2G5P39877 138 aa22.36■■□□□ 1.17
SLC48A1-208ENST00000551301 CLCN4P51793 760 aa22.36■■□□□ 1.17
SLC48A1-208ENST00000551301 ZXDAP98168 799 aa22.36■■□□□ 1.17
SLC48A1-208ENST00000551301 ATP2C1P98194 919 aaPredicted RBP22.36■■□□□ 1.17
SLC48A1-208ENST00000551301 TUSC3Q13454 348 aa22.36■■□□□ 1.17
SLC48A1-208ENST00000551301 USP41Q3LFD5 358 aa22.36■■□□□ 1.17
SLC48A1-208ENST00000551301 ATF7IP2Q5U623 682 aa22.36■■□□□ 1.17
SLC48A1-208ENST00000551301 LARP1BQ659C4 914 aaKnown RBP22.36■■□□□ 1.17
SLC48A1-208ENST00000551301 C12orf76Q8N812 135 aaPredicted RBP22.36■■□□□ 1.17
SLC48A1-208ENST00000551301 C17orf75Q9HAS0 396 aa22.36■■□□□ 1.17
SLC48A1-208ENST00000551301 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.36■■□□□ 1.17
SLC48A1-208ENST00000551301 ADAM28Q9UKQ2 775 aa22.36■■□□□ 1.17
SLC48A1-208ENST00000551301 RBM19Q9Y4C8 960 aaKnown RBP22.36■■□□□ 1.17
SLC48A1-208ENST00000551301 E9PMD0 336 aa22.35■■□□□ 1.17
SLC48A1-208ENST00000551301 LILRB3O75022 631 aa22.35■■□□□ 1.17
SLC48A1-208ENST00000551301 SP100P23497 879 aaPredicted RBP22.35■■□□□ 1.17
SLC48A1-208ENST00000551301 HSP90AA2PQ14568 343 aaPredicted RBP22.35■■□□□ 1.17
SLC48A1-208ENST00000551301 ARL6IP4Q66PJ3 421 aaKnown RBP22.35■■□□□ 1.17
SLC48A1-208ENST00000551301 TMC5Q6UXY8 1006 aa22.35■■□□□ 1.17
SLC48A1-208ENST00000551301 TRIM67Q6ZTA4 783 aa22.35■■□□□ 1.17
SLC48A1-208ENST00000551301 GSTCDQ8NEC7 633 aa22.35■■□□□ 1.17
SLC48A1-208ENST00000551301 POMKQ9H5K3 350 aa22.35■■□□□ 1.17
SLC48A1-208ENST00000551301 SNTG2Q9NY99 539 aa22.35■■□□□ 1.17
SLC48A1-208ENST00000551301 SF3B1O75533 1304 aaKnown RBP eCLIP22.34■■□□□ 1.171e-19■■■■■ 448
SLC48A1-208ENST00000551301 PP2D1A8MPX8 630 aa22.34■■□□□ 1.17
SLC48A1-208ENST00000551301 RECQL4O94761 1208 aa22.34■■□□□ 1.17
SLC48A1-208ENST00000551301 GLUD1P00367 558 aa22.34■■□□□ 1.17
SLC48A1-208ENST00000551301 CDC25AP30304 524 aa22.34■■□□□ 1.17
SLC48A1-208ENST00000551301 PEX3P56589 373 aa22.34■■□□□ 1.17
SLC48A1-208ENST00000551301 DSG1Q02413 1049 aa22.34■■□□□ 1.17
SLC48A1-208ENST00000551301 PTPN21Q16825 1174 aa22.34■■□□□ 1.17
SLC48A1-208ENST00000551301 KIAA0319Q5VV43 1072 aa22.34■■□□□ 1.17
SLC48A1-208ENST00000551301 FUT10Q6P4F1 479 aa22.34■■□□□ 1.17
SLC48A1-208ENST00000551301 GPR65Q8IYL9 337 aa22.34■■□□□ 1.17
SLC48A1-208ENST00000551301 PLCD3Q8N3E9 789 aa22.34■■□□□ 1.17
SLC48A1-208ENST00000551301 TDRD5Q8NAT2 981 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms