RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 NRG4Q8WWG1 115 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 ALG3Q92685 438 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 SHISA4Q96DD7 197 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 TSPAN17Q96FV3 270 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 NOL10Q9BSC4 688 aaKnown RBP6.57□□□□□ -1.36
CPSF6-206ENST00000550987 MTG2Q9H4K7 406 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 PRDM12Q9H4Q4 367 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 BCAS3Q9H6U6 928 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 PAK6Q9NQU5 681 aaPredicted RBP6.57□□□□□ -1.36
CPSF6-206ENST00000550987 FTSJ1Q9UET6 329 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 TAGLN3Q9UI15 199 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 TMPRSS11EQ9UL52 423 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 CDY2AQ9Y6F7 541 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 PIEZO1Q92508 2521 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 NOS1P29475 1434 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 ZBED1O96006 694 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 RPLP2P05387 115 aaKnown RBP6.56□□□□□ -1.36
CPSF6-206ENST00000550987 APEX1P27695 318 aaKnown RBP6.56□□□□□ -1.36
CPSF6-206ENST00000550987 AFMP43652 599 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 MAPKAPK2P49137 400 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 AK2P54819 239 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 ERVFRD-1P60508 538 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 MALLQ13021 153 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 ZC3H14Q6PJT7 736 aaKnown RBP6.56□□□□□ -1.36
CPSF6-206ENST00000550987 RPTNQ6XPR3 784 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 AMIGO3Q86WK7 504 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 DTX1Q86Y01 620 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 FAM43AQ8N2R8 423 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 CDYL2Q8N8U2 506 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 IGDCC4Q8TDY8 1250 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 TSPEARQ8WU66 669 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 HDAC10Q969S8 669 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 HIST1H2AHQ96KK5 128 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 MYD88Q99836 296 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 HIST1H2AJQ99878 128 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 C19orf73Q9NVV2 129 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 DENND2AQ9ULE3 1009 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 PHTF1Q9UMS5 762 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 PTPN22Q9Y2R2 807 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 YBX2Q9Y2T7 364 aaKnown RBP6.56□□□□□ -1.36
CPSF6-206ENST00000550987 PCDHB6Q9Y5E3 794 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 PIK3C2BO00750 1634 aa6.56□□□□□ -1.36
CPSF6-206ENST00000550987 TRPM2O94759 1503 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 THSD7BQ9C0I4 1608 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 H3BML4 177 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 NRP2O60462 931 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 UBXN7O94888 489 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 MED26O95402 600 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 FOSP01100 380 aaPredicted RBP6.55□□□□□ -1.36
CPSF6-206ENST00000550987 PROCP04070 461 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 FURINP09958 794 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 GSK3AP49840 483 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 NRG3P56975 720 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 FAM193AP78312 1265 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 GALEQ14376 348 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 DHX8Q14562 1220 aaKnown RBP6.55□□□□□ -1.36
CPSF6-206ENST00000550987 KLHDC10Q6PID8 442 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 LRSAM1Q6UWE0 723 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 OVCH2Q7RTZ1 564 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 DAAM2Q86T65 1068 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 SRLQ86TD4 932 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 FAM186BQ8IYM0 893 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 SPICE1Q8N0Z3 855 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 PRR18Q8N4B5 295 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 DPF2Q92785 391 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 RNF32Q9H0A6 362 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 NLRC4Q9NPP4 1024 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 KMT5AQ9NQR1 393 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 MBNL3Q9NUK0 354 aaKnown RBP6.55□□□□□ -1.36
CPSF6-206ENST00000550987 LIMCH1Q9UPQ0 1083 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 CTNND2Q9UQB3 1225 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 HCFC2Q9Y5Z7 792 aa6.55□□□□□ -1.36
CPSF6-206ENST00000550987 ADGRL3Q9HAR2 1447 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 OR14I1A6ND48 311 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 A6NNZ2 444 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 ZNF839A8K0R7 811 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 FAM227AF5H4B4 570 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 PLSCR1O15162 318 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 HTRA2O43464 458 aaPredicted RBP6.54□□□□□ -1.36
CPSF6-206ENST00000550987 OPHN1O60890 802 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 TUSC2O75896 110 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 WNT11O96014 354 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 RNASE1P07998 156 aaKnown RBP6.54□□□□□ -1.36
CPSF6-206ENST00000550987 HTR3AP46098 478 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 GLRBP48167 497 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 GPR15P49685 360 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 ZNF280AP59817 542 aaPredicted RBP6.54□□□□□ -1.36
CPSF6-206ENST00000550987 MAP2K1Q02750 393 aaPredicted RBP6.54□□□□□ -1.36
CPSF6-206ENST00000550987 NFATC3Q12968 1075 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 ADRM1Q16186 407 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 HSP90AB4PQ58FF6 505 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 PPP4R3AQ6IN85 833 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 C1orf228Q6PIY5 440 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 LMBR1LQ6UX01 489 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 TMC5Q6UXY8 1006 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 MIGA2Q7L4E1 593 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 WFDC3Q8IUB2 231 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 LYSMD2Q8IV50 215 aa6.54□□□□□ -1.36
CPSF6-206ENST00000550987 ENAHQ8N8S7 591 aaPredicted RBP6.54□□□□□ -1.36
CPSF6-206ENST00000550987 BTBD2Q9BX70 525 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms