RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 ACOT2P49753 483 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 OSTNP61366 133 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 SNRPFP62306 86 aaKnown RBP11.23□□□□□ -0.61
RAB5C-207ENST00000550504 MCL1Q07820 350 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 NOLC1Q14978 699 aaKnown RBP eCLIP11.23□□□□□ -0.61
RAB5C-207ENST00000550504 CCDC40Q4G0X9 1142 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 ZBTB41Q5SVQ8 909 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 FOXR2Q6PJQ5 311 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 DEFB128Q7Z7B8 93 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 C12orf56Q8IXR9 622 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 ZC3H3Q8IXZ2 948 aaKnown RBP11.23□□□□□ -0.61
RAB5C-207ENST00000550504 THNSL1Q8IYQ7 743 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 C7orf61Q8IZ16 206 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 USP38Q8NB14 1042 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 XXYLT1Q8NBI6 393 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 CEP63Q96MT8 703 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 ADPGKQ9BRR6 497 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 FAM213AQ9BRX8 229 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 EIF2AQ9BY44 585 aaKnown RBP11.23□□□□□ -0.61
RAB5C-207ENST00000550504 IFIH1Q9BYX4 1025 aaKnown RBP11.23□□□□□ -0.61
RAB5C-207ENST00000550504 CDT1Q9H211 546 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 HSD3B7Q9H2F3 369 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 PTPRHQ9HD43 1115 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 DMAC2Q9NW81 257 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 FRMD4BQ9Y2L6 1034 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 SQORQ9Y6N5 450 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 TANC1Q9C0D5 1861 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 ALPK3Q96L96 1907 aa11.23□□□□□ -0.61
RAB5C-207ENST00000550504 GOLGA6L3A6NEY3 463 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 KCNJ18B7U540 433 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 KIAA0355O15063 1070 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 MGEA5O60502 916 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 TIMP1P01033 207 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 MCF2P10911 925 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 ATP1A3P13637 1013 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 ZSCAN20P17040 1043 aaPredicted RBP11.22□□□□□ -0.61
RAB5C-207ENST00000550504 CDK11BP21127 795 aaKnown RBP11.22□□□□□ -0.61
RAB5C-207ENST00000550504 ITGB8P26012 769 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 TNFSF9P41273 254 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 KCNJ12Q14500 433 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 SCN5AQ14524 2016 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 GSE1Q14687 1217 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 GPNMBQ14956 572 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 NFIL3Q16649 462 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 UBXN11Q5T124 520 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 CDKAL1Q5VV42 579 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 TWF2Q6IBS0 349 aaKnown RBP11.22□□□□□ -0.61
RAB5C-207ENST00000550504 SLC27A1Q6PCB7 646 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 FILIP1Q7Z7B0 1213 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 IRF2BP1Q8IU81 584 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 CBWD2Q8IUF1 395 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 SLC9A9Q8IVB4 645 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 FAM186BQ8IYM0 893 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 GPD1LQ8N335 351 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 CEP120Q8N960 986 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 CNOT6LQ96LI5 555 aaKnown RBP11.22□□□□□ -0.61
RAB5C-207ENST00000550504 HTATIP2Q9BUP3 242 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 TRIM6Q9C030 488 aaPredicted RBP11.22□□□□□ -0.61
RAB5C-207ENST00000550504 TRIOBPQ9H2D6 2365 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 TMX1Q9H3N1 280 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 THAP9Q9H5L6 903 aa11.22□□□□□ -0.61
RAB5C-207ENST00000550504 MAGEC2Q9UBF1 373 aaPredicted RBP11.22□□□□□ -0.61
RAB5C-207ENST00000550504 KIAA0391O15091 583 aaKnown RBP11.21□□□□□ -0.61
RAB5C-207ENST00000550504 OGTO15294 1046 aa11.21□□□□□ -0.61
RAB5C-207ENST00000550504 SLC16A3O15427 465 aaKnown RBP11.21□□□□□ -0.61
RAB5C-207ENST00000550504 EXTL3O43909 919 aa11.21□□□□□ -0.61
RAB5C-207ENST00000550504 EVI5O60447 810 aa11.21□□□□□ -0.61
RAB5C-207ENST00000550504 ADRB2P07550 413 aa11.21□□□□□ -0.61
RAB5C-207ENST00000550504 EPB41P11171 864 aaKnown RBP11.21□□□□□ -0.61
RAB5C-207ENST00000550504 ZNF18P17022 549 aa11.21□□□□□ -0.61
RAB5C-207ENST00000550504 PSMC2P35998 433 aaKnown RBP11.21□□□□□ -0.61
RAB5C-207ENST00000550504 MTIF2P46199 727 aaKnown RBP11.21□□□□□ -0.61
RAB5C-207ENST00000550504 PLCB2Q00722 1185 aa11.21□□□□□ -0.61
RAB5C-207ENST00000550504 MYBPC2Q14324 1141 aa11.21□□□□□ -0.61
RAB5C-207ENST00000550504 DCAF4L1Q3SXM0 396 aa11.21□□□□□ -0.61
RAB5C-207ENST00000550504 APBB1IPQ7Z5R6 666 aaPredicted RBP11.21□□□□□ -0.61
RAB5C-207ENST00000550504 FAM114A1Q8IWE2 563 aa11.21□□□□□ -0.61
RAB5C-207ENST00000550504 TMEM192Q8IY95 271 aa11.21□□□□□ -0.61
RAB5C-207ENST00000550504 DBF4BQ8NFT6 615 aa11.21□□□□□ -0.61
RAB5C-207ENST00000550504 SEPT8Q92599 483 aa11.21□□□□□ -0.61
RAB5C-207ENST00000550504 ADAM2Q99965 735 aa11.21□□□□□ -0.61
RAB5C-207ENST00000550504 APOL6Q9BWW8 343 aa11.21□□□□□ -0.61
RAB5C-207ENST00000550504 CHST12Q9NRB3 414 aa11.21□□□□□ -0.61
RAB5C-207ENST00000550504 PRKAG2Q9UGJ0 569 aa11.21□□□□□ -0.61
RAB5C-207ENST00000550504 HES2Q9Y543 173 aa11.21□□□□□ -0.61
RAB5C-207ENST00000550504 FSD2A1L4K1 749 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 ZNF233A6NK53 670 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 FAM189A1O60320 539 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 PARNO95453 639 aaKnown RBP11.2□□□□□ -0.62
RAB5C-207ENST00000550504 GNA14O95837 355 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 LDHAP00338 332 aaKnown RBP11.2□□□□□ -0.62
RAB5C-207ENST00000550504 STAG3L1P0CL83 205 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 KRT13P13646 458 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 CSF2RAP15509 400 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 SYN1P17600 705 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 SPAG1Q07617 926 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 DSC3Q14574 896 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 SNRNP35Q16560 246 aaKnown RBP11.2□□□□□ -0.62
RAB5C-207ENST00000550504 TCTN1Q2MV58 587 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 PLEKHG4Q58EX7 1191 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms