RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 XXYLT1Q8NBI6 393 aa15.41■□□□□ 0.06
CACNB3-216ENST00000550391 POMGNT1Q8WZA1 660 aa15.41■□□□□ 0.06
CACNB3-216ENST00000550391 CNOT6LQ96LI5 555 aaKnown RBP15.41■□□□□ 0.06
CACNB3-216ENST00000550391 LBHD1Q9BQE6 289 aaPredicted RBP15.41■□□□□ 0.06
CACNB3-216ENST00000550391 HSPBP1Q9NZL4 362 aa15.41■□□□□ 0.06
CACNB3-216ENST00000550391 LIMA1Q9UHB6 759 aaKnown RBP15.41■□□□□ 0.06
CACNB3-216ENST00000550391 FRMD4BQ9Y2L6 1034 aa15.41■□□□□ 0.06
CACNB3-216ENST00000550391 HCN4Q9Y3Q4 1203 aa15.41■□□□□ 0.06
CACNB3-216ENST00000550391 CNTNAP2Q9UHC6 1331 aa15.41■□□□□ 0.06
CACNB3-216ENST00000550391 ABLIM1O14639 778 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 TLR3O15455 904 aaKnown RBP15.4■□□□□ 0.06
CACNB3-216ENST00000550391 AP5Z1O43299 807 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 EXOC3O60645 756 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 TOM1L1O75674 476 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 AKAP3O75969 853 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 ERLIN2O94905 339 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 SERPINC1P01008 464 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 CTSHP09668 335 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 EPB41P11171 864 aaKnown RBP15.4■□□□□ 0.06
CACNB3-216ENST00000550391 CKBP12277 381 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 FGFR4P22455 802 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 PROZP22891 400 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 PSMC2P35998 433 aaKnown RBP15.4■□□□□ 0.06
CACNB3-216ENST00000550391 ATN1P54259 1190 aaPredicted RBP15.4■□□□□ 0.06
CACNB3-216ENST00000550391 MARSP56192 900 aaKnown RBP15.4■□□□□ 0.06
CACNB3-216ENST00000550391 TMEM132AQ24JP5 1023 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 CCDC40Q4G0X9 1142 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 ATF7IP2Q5U623 682 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 FRMD5Q7Z6J6 570 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 ZBTB45Q96K62 511 aaPredicted RBP15.4■□□□□ 0.06
CACNB3-216ENST00000550391 TOX2Q96NM4 488 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 MKNK1Q9BUB5 465 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 HAPLN2Q9GZV7 340 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 PCIF1Q9H4Z3 704 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 PTPRHQ9HD43 1115 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 TNFSF13BQ9Y275 285 aa15.4■□□□□ 0.06
CACNB3-216ENST00000550391 A0A0B4J269 797 aa15.39■□□□□ 0.05
CACNB3-216ENST00000550391 LRRC10BA6NIK2 292 aa15.39■□□□□ 0.05
CACNB3-216ENST00000550391 CLDN3O15551 220 aa15.39■□□□□ 0.05
CACNB3-216ENST00000550391 ARF4P18085 180 aaPredicted RBP15.39■□□□□ 0.05
CACNB3-216ENST00000550391 SFPQP23246 707 aaKnown RBP eCLIP15.39■□□□□ 0.05
CACNB3-216ENST00000550391 AXLP30530 894 aa15.39■□□□□ 0.05
CACNB3-216ENST00000550391 MATR3P43243 847 aaKnown RBP eCLIP15.39■□□□□ 0.05
CACNB3-216ENST00000550391 MTIF2P46199 727 aaKnown RBP15.39■□□□□ 0.05
CACNB3-216ENST00000550391 CASP4P49662 377 aa15.39■□□□□ 0.05
CACNB3-216ENST00000550391 MCL1Q07820 350 aa15.39■□□□□ 0.05
CACNB3-216ENST00000550391 KRT31Q15323 416 aa15.39■□□□□ 0.05
CACNB3-216ENST00000550391 ZNF618Q5T7W0 954 aa15.39■□□□□ 0.05
CACNB3-216ENST00000550391 TRAF7Q6Q0C0 670 aa15.39■□□□□ 0.05
CACNB3-216ENST00000550391 MPZL3Q6UWV2 235 aa15.39■□□□□ 0.05
CACNB3-216ENST00000550391 CATSPER4Q7RTX7 472 aa15.39■□□□□ 0.05
CACNB3-216ENST00000550391 APTXQ7Z2E3 356 aaKnown RBP15.39■□□□□ 0.05
CACNB3-216ENST00000550391 FAM186BQ8IYM0 893 aa15.39■□□□□ 0.05
CACNB3-216ENST00000550391 CCDC155Q8N6L0 562 aa15.39■□□□□ 0.05
CACNB3-216ENST00000550391 CAGE1Q8TC20 777 aa15.39■□□□□ 0.05
CACNB3-216ENST00000550391 ATXN2LQ8WWM7 1075 aaKnown RBP15.39■□□□□ 0.05
CACNB3-216ENST00000550391 ANP32BQ92688 251 aaKnown RBP15.39■□□□□ 0.05
CACNB3-216ENST00000550391 TCHPQ9BT92 498 aa15.39■□□□□ 0.05
CACNB3-216ENST00000550391 METTL14Q9HCE5 456 aaKnown RBP15.39■□□□□ 0.05
CACNB3-216ENST00000550391 KIAA1586Q9HCI6 787 aa15.39■□□□□ 0.05
CACNB3-216ENST00000550391 NOC2LQ9Y3T9 749 aaKnown RBP15.39■□□□□ 0.05
CACNB3-216ENST00000550391 A0A1B0GUA9 196 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 N4BP3O15049 544 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 MAPK13O15264 365 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 CBFA2T2O43439 604 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 PQBP1O60828 265 aaKnown RBP15.38■□□□□ 0.05
CACNB3-216ENST00000550391 TPM2P07951 284 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 HOXA11P31270 313 aaPredicted RBP15.38■□□□□ 0.05
CACNB3-216ENST00000550391 UBASH3AP57075 661 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 TRIM60Q495X7 471 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 FILIP1LQ4L180 1135 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 EEF1DP3Q658K8 133 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 APBB1IPQ7Z5R6 666 aaPredicted RBP15.38■□□□□ 0.05
CACNB3-216ENST00000550391 FAM228AQ86W67 206 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 GPD1LQ8N335 351 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 ZSWIM2Q8NEG5 633 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 BORCS6Q96GS4 357 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 CPB2Q96IY4 423 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 FBXL18Q96ME1 805 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 MSTO1Q9BUK6 570 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 TRIM5Q9C035 493 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 PDZD7Q9H5P4 517 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 AGPAT5Q9NUQ2 364 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 IFNKQ9P0W0 207 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 ANKFY1Q9P2R3 1169 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 ARMCX3Q9UH62 379 aaPredicted RBP15.38■□□□□ 0.05
CACNB3-216ENST00000550391 AGO2Q9UKV8 859 aaKnown RBP15.38■□□□□ 0.05
CACNB3-216ENST00000550391 SQORQ9Y6N5 450 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 NCOR1O75376 2440 aa15.38■□□□□ 0.05
CACNB3-216ENST00000550391 DCDC2CA8MYV0 355 aa15.37■□□□□ 0.05
CACNB3-216ENST00000550391 EXTL3O43909 919 aa15.37■□□□□ 0.05
CACNB3-216ENST00000550391 RPS6KA5O75582 802 aa15.37■□□□□ 0.05
CACNB3-216ENST00000550391 LDHAP00338 332 aaKnown RBP15.37■□□□□ 0.05
CACNB3-216ENST00000550391 COPB1P53618 953 aaKnown RBP15.37■□□□□ 0.05
CACNB3-216ENST00000550391 TLE2Q04725 743 aa15.37■□□□□ 0.05
CACNB3-216ENST00000550391 FAAP100Q0VG06 881 aa15.37■□□□□ 0.05
CACNB3-216ENST00000550391 BFSP2Q13515 415 aa15.37■□□□□ 0.05
CACNB3-216ENST00000550391 NOLC1Q14978 699 aaKnown RBP eCLIP15.37■□□□□ 0.05
CACNB3-216ENST00000550391 FBXO47Q5MNV8 452 aa15.37■□□□□ 0.05
CACNB3-216ENST00000550391 ZBTB33Q86T24 672 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms