RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 ADPGKQ9BRR6 497 aa13.07□□□□□ -0.32
PFDN5-208ENST00000549995 TARS2Q9BW92 718 aaKnown RBP13.07□□□□□ -0.32
PFDN5-208ENST00000549995 RNF39Q9H2S5 420 aa13.07□□□□□ -0.32
PFDN5-208ENST00000549995 NXF3Q9H4D5 531 aaKnown RBP13.07□□□□□ -0.32
PFDN5-208ENST00000549995 PANK4Q9NVE7 773 aa13.07□□□□□ -0.32
PFDN5-208ENST00000549995 UBE4BO95155 1302 aa13.07□□□□□ -0.32
PFDN5-208ENST00000549995 EPOPA6NHQ4 379 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 TBKBP1A7MCY6 615 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 H3BNC9 293 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 EIF3DO15371 548 aaKnown RBP eCLIP13.06□□□□□ -0.32
PFDN5-208ENST00000549995 GTPBP6O43824 516 aaPredicted RBP13.06□□□□□ -0.32
PFDN5-208ENST00000549995 ZNF202O95125 648 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 NPTXRO95502 500 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 ITGA4P13612 1032 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 BMPR1AP36894 532 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 POU5F1Q01860 360 aaKnown RBP13.06□□□□□ -0.32
PFDN5-208ENST00000549995 FAM160A1Q05DH4 1040 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 DSC1Q08554 894 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 CUL4BQ13620 913 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 EPC2Q52LR7 807 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 NOMO2Q5JPE7 1267 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 L1TD1Q5T7N2 865 aaKnown RBP13.06□□□□□ -0.32
PFDN5-208ENST00000549995 SLC39A4Q6P5W5 647 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 GLB1LQ6UWU2 654 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 Q7L0L9 218 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 CDR2LQ86X02 465 aaPredicted RBP13.06□□□□□ -0.32
PFDN5-208ENST00000549995 TMEM192Q8IY95 271 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 HACE1Q8IYU2 909 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 HELQQ8TDG4 1101 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 STAMQ92783 540 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 LPPQ93052 612 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 C17orf80Q9BSJ5 609 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 FGFBP2Q9BYJ0 223 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 HAPLN2Q9GZV7 340 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 TBC1D13Q9NVG8 400 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 LMCD1Q9NZU5 365 aa13.06□□□□□ -0.32
PFDN5-208ENST00000549995 ADRB2P07550 413 aa13.05□□□□□ -0.32
PFDN5-208ENST00000549995 LAG3P18627 525 aa13.05□□□□□ -0.32
PFDN5-208ENST00000549995 CASP5P51878 434 aa13.05□□□□□ -0.32
PFDN5-208ENST00000549995 DPYDQ12882 1025 aa13.05□□□□□ -0.32
PFDN5-208ENST00000549995 NOLC1Q14978 699 aaKnown RBP eCLIP13.05□□□□□ -0.32
PFDN5-208ENST00000549995 NAB2Q15742 525 aa13.05□□□□□ -0.32
PFDN5-208ENST00000549995 HERC4Q5GLZ8 1057 aaPredicted RBP13.05□□□□□ -0.32
PFDN5-208ENST00000549995 FAM26FQ5R3K3 315 aa13.05□□□□□ -0.32
PFDN5-208ENST00000549995 KANK3Q6NY19 840 aa13.05□□□□□ -0.32
PFDN5-208ENST00000549995 ALKAL1Q6UXT8 129 aa13.05□□□□□ -0.32
PFDN5-208ENST00000549995 SPATA20Q8TB22 786 aa13.05□□□□□ -0.32
PFDN5-208ENST00000549995 ZNF507Q8TCN5 953 aa13.05□□□□□ -0.32
PFDN5-208ENST00000549995 TMEM174Q8WUU8 243 aa13.05□□□□□ -0.32
PFDN5-208ENST00000549995 CDX2Q99626 313 aaPredicted RBP13.05□□□□□ -0.32
PFDN5-208ENST00000549995 TRIM6Q9C030 488 aaPredicted RBP13.05□□□□□ -0.32
PFDN5-208ENST00000549995 LMAN2LQ9H0V9 348 aa13.05□□□□□ -0.32
PFDN5-208ENST00000549995 MRPL44Q9H9J2 332 aaKnown RBP13.05□□□□□ -0.32
PFDN5-208ENST00000549995 TYW1Q9NV66 732 aaKnown RBP13.05□□□□□ -0.32
PFDN5-208ENST00000549995 KANSL3Q9P2N6 904 aa13.05□□□□□ -0.32
PFDN5-208ENST00000549995 USP20Q9Y2K6 914 aa13.05□□□□□ -0.32
PFDN5-208ENST00000549995 PCDHB13Q9Y5F0 798 aa13.05□□□□□ -0.32
PFDN5-208ENST00000549995 A0A0B4J269 797 aa13.04□□□□□ -0.32
PFDN5-208ENST00000549995 ARL5CA6NH57 179 aa13.04□□□□□ -0.32
PFDN5-208ENST00000549995 RECQL4O94761 1208 aa13.04□□□□□ -0.32
PFDN5-208ENST00000549995 EFEMP2O95967 443 aa13.04□□□□□ -0.32
PFDN5-208ENST00000549995 IDEP14735 1019 aa13.04□□□□□ -0.32
PFDN5-208ENST00000549995 ASIC1P78348 528 aa13.04□□□□□ -0.32
PFDN5-208ENST00000549995 PLCB3Q01970 1234 aa13.04□□□□□ -0.32
PFDN5-208ENST00000549995 PSMD2Q13200 908 aa13.04□□□□□ -0.32
PFDN5-208ENST00000549995 KCNB1Q14721 858 aa13.04□□□□□ -0.32
PFDN5-208ENST00000549995 ZNF568Q3ZCX4 644 aa13.04□□□□□ -0.32
PFDN5-208ENST00000549995 PAN2Q504Q3 1202 aaKnown RBP13.04□□□□□ -0.32
PFDN5-208ENST00000549995 ZC2HC1CQ53FD0 456 aaPredicted RBP13.04□□□□□ -0.32
PFDN5-208ENST00000549995 GRAMD1CQ8IYS0 662 aa13.04□□□□□ -0.32
PFDN5-208ENST00000549995 ABI1Q8IZP0 508 aa13.04□□□□□ -0.32
PFDN5-208ENST00000549995 COLGALT1Q8NBJ5 622 aa13.04□□□□□ -0.32
PFDN5-208ENST00000549995 FBXO22Q8NEZ5 403 aa13.04□□□□□ -0.32
PFDN5-208ENST00000549995 ZBTB45Q96K62 511 aaPredicted RBP13.04□□□□□ -0.32
PFDN5-208ENST00000549995 TMEM175Q9BSA9 504 aa13.04□□□□□ -0.32
PFDN5-208ENST00000549995 C11orf84Q9BUA3 381 aaPredicted RBP13.04□□□□□ -0.32
PFDN5-208ENST00000549995 LZTS1Q9Y250 596 aa13.04□□□□□ -0.32
PFDN5-208ENST00000549995 HES2Q9Y543 173 aa13.04□□□□□ -0.32
PFDN5-208ENST00000549995 PTGESO14684 152 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 HNRNPDLO14979 420 aaKnown RBP13.03□□□□□ -0.32
PFDN5-208ENST00000549995 MEFVO15553 781 aaPredicted RBP13.03□□□□□ -0.32
PFDN5-208ENST00000549995 B4GALT3O60512 393 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 RHOBTB3O94955 611 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 GCNT3O95395 438 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 PRR29P0C7W0 189 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 MYBP10242 640 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 CASP1P29466 404 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 HOXD13P35453 343 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 PPM1AP35813 382 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 MLH1P40692 756 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 AFMP43652 599 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 AFF1P51825 1210 aaKnown RBP13.03□□□□□ -0.32
PFDN5-208ENST00000549995 UBE2HP62256 183 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 SNRPFP62306 86 aaKnown RBP13.03□□□□□ -0.32
PFDN5-208ENST00000549995 UBE3AQ05086 875 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 GRIK3Q13003 919 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 ADGRE1Q14246 886 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 KYAT1Q16773 422 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 SLC39A11Q8N1S5 342 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 CEP120Q8N960 986 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms