RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 KRT79Q5XKE5 535 aa10.65□□□□□ -0.7
GCN1-205ENST00000548821 CATSPER3Q86XQ3 398 aa10.65□□□□□ -0.7
GCN1-205ENST00000548821 ZNF280BQ86YH2 543 aa10.65□□□□□ -0.7
GCN1-205ENST00000548821 COLGALT2Q8IYK4 626 aa10.65□□□□□ -0.7
GCN1-205ENST00000548821 SMG8Q8ND04 991 aaKnown RBP10.65□□□□□ -0.7
GCN1-205ENST00000548821 SLC22A17Q8WUG5 538 aa10.65□□□□□ -0.7
GCN1-205ENST00000548821 GAD1Q99259 594 aa10.65□□□□□ -0.7
GCN1-205ENST00000548821 TIPINQ9BVW5 301 aa10.65□□□□□ -0.7
GCN1-205ENST00000548821 APOL5Q9BWW9 433 aa10.65□□□□□ -0.7
GCN1-205ENST00000548821 C17orf75Q9HAS0 396 aa10.65□□□□□ -0.7
GCN1-205ENST00000548821 RXFP1Q9HBX9 757 aa10.65□□□□□ -0.7
GCN1-205ENST00000548821 TOPORSQ9NS56 1045 aaPredicted RBP10.65□□□□□ -0.7
GCN1-205ENST00000548821 BMP2KQ9NSY1 1161 aaPredicted RBP10.65□□□□□ -0.7
GCN1-205ENST00000548821 GJB4Q9NTQ9 266 aa10.65□□□□□ -0.7
GCN1-205ENST00000548821 ZDHHC7Q9NXF8 308 aa10.65□□□□□ -0.7
GCN1-205ENST00000548821 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.65□□□□□ -0.7
GCN1-205ENST00000548821 FNIP2Q9P278 1114 aa10.65□□□□□ -0.7
GCN1-205ENST00000548821 WRAP73Q9P2S5 460 aaPredicted RBP10.65□□□□□ -0.7
GCN1-205ENST00000548821 ADAM28Q9UKQ2 775 aa10.65□□□□□ -0.7
GCN1-205ENST00000548821 RBM19Q9Y4C8 960 aaKnown RBP10.65□□□□□ -0.7
GCN1-205ENST00000548821 BRWD1Q9NSI6 2320 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 H0YCG3 227 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 K7ERI5 159 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 ACKR2O00590 384 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 SSBP05455 408 aaKnown RBP eCLIP10.64□□□□□ -0.71
GCN1-205ENST00000548821 CNPP09543 421 aaKnown RBP10.64□□□□□ -0.71
GCN1-205ENST00000548821 ARF4P18085 180 aaPredicted RBP10.64□□□□□ -0.71
GCN1-205ENST00000548821 CCT6AP40227 531 aaKnown RBP10.64□□□□□ -0.71
GCN1-205ENST00000548821 MLH1P40692 756 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 MCM2P49736 904 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 FXR2P51116 673 aaKnown RBP eCLIP10.64□□□□□ -0.71
GCN1-205ENST00000548821 SMTNP53814 917 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 YARSP54577 528 aaKnown RBP10.64□□□□□ -0.71
GCN1-205ENST00000548821 DSG1Q02413 1049 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 DSC1Q08554 894 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 TUSC3Q13454 348 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 EARS2Q5JPH6 523 aaKnown RBP10.64□□□□□ -0.71
GCN1-205ENST00000548821 PADI6Q6TGC4 694 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 DTHD1Q6ZMT9 781 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 CPB2Q96IY4 423 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 DRC1Q96MC2 740 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 UROC1Q96N76 676 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 APOL6Q9BWW8 343 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 FZD8Q9H461 694 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 POMKQ9H5K3 350 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 XPNPEP1Q9NQW7 623 aa10.64□□□□□ -0.71
GCN1-205ENST00000548821 PRG3Q9Y2Y8 225 aaPredicted RBP10.64□□□□□ -0.71
GCN1-205ENST00000548821 LOXHD1Q8IVV2 1947 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 CCDC195A0A1B0GUA6 201 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 POTEMA6NI47 508 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 C2CD2LO14523 706 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 ZBTB39O15060 712 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 JAK2O60674 1132 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 LILRB3O75022 631 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 NPTXRO95502 500 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 EPCAMP16422 314 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 RFX1P22670 979 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 AVPR2P30518 371 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 ABCD1P33897 745 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 PRPHP41219 470 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 SCNN1GP51170 649 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 CLCN5P51795 746 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 RBM10P98175 930 aaKnown RBP10.63□□□□□ -0.71
GCN1-205ENST00000548821 NHLH1Q02575 133 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 TDGQ13569 410 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 HSP90AA2PQ14568 343 aaPredicted RBP10.63□□□□□ -0.71
GCN1-205ENST00000548821 ZNF174Q15697 407 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 RILPL1Q5EBL4 403 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 LIN9Q5TKA1 542 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 KIAA0319Q5VV43 1072 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 CDCA2Q69YH5 1023 aaPredicted RBP10.63□□□□□ -0.71
GCN1-205ENST00000548821 TMC5Q6UXY8 1006 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 MAEAQ7L5Y9 396 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 ALYREFQ86V81 257 aaKnown RBP10.63□□□□□ -0.71
GCN1-205ENST00000548821 CCDC83Q8IWF9 413 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 ASAP3Q8TDY4 903 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 AUTS2Q8WXX7 1259 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 DDX27Q96GQ7 796 aaKnown RBP10.63□□□□□ -0.71
GCN1-205ENST00000548821 EIF2AQ9BY44 585 aaKnown RBP10.63□□□□□ -0.71
GCN1-205ENST00000548821 NT5C3AQ9H0P0 336 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 CHST7Q9NS84 486 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 SLC38A7Q9NVC3 462 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 LIMD1Q9UGP4 676 aa10.63□□□□□ -0.71
GCN1-205ENST00000548821 MEIS3P2A8K0S8 358 aa10.62□□□□□ -0.71
GCN1-205ENST00000548821 C2CD4DB7Z1M9 353 aa10.62□□□□□ -0.71
GCN1-205ENST00000548821 H3BQV1 296 aa10.62□□□□□ -0.71
GCN1-205ENST00000548821 TEX28O15482 410 aa10.62□□□□□ -0.71
GCN1-205ENST00000548821 SLC26A4O43511 780 aa10.62□□□□□ -0.71
GCN1-205ENST00000548821 XYLBO75191 536 aa10.62□□□□□ -0.71
GCN1-205ENST00000548821 PRKCBP05771 671 aa10.62□□□□□ -0.71
GCN1-205ENST00000548821 HNRNPA1P09651 372 aaKnown RBP eCLIP10.62□□□□□ -0.71
GCN1-205ENST00000548821 SPATA31C1P0DKV0 1188 aa10.62□□□□□ -0.71
GCN1-205ENST00000548821 AKAP5P24588 427 aa10.62□□□□□ -0.71
GCN1-205ENST00000548821 U2AF2P26368 475 aaKnown RBP eCLIP10.62□□□□□ -0.71
GCN1-205ENST00000548821 MRE11P49959 708 aa10.62□□□□□ -0.71
GCN1-205ENST00000548821 DMP1Q13316 513 aaPredicted RBP10.62□□□□□ -0.71
GCN1-205ENST00000548821 RABEP1Q15276 862 aa10.62□□□□□ -0.71
GCN1-205ENST00000548821 AMHR2Q16671 573 aa10.62□□□□□ -0.71
GCN1-205ENST00000548821 UVSSAQ2YD98 709 aa10.62□□□□□ -0.71
GCN1-205ENST00000548821 FUT10Q6P4F1 479 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms